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The map label for this gene is erfK [H]

Identifier: 238895496

GI number: 238895496

Start: 3381679

End: 3382614

Strand: Reverse

Name: erfK [H]

Synonym: KP1_3568

Alternate gene names: 238895496

Gene position: 3382614-3381679 (Counterclockwise)

Preceding gene: 238895497

Following gene: 238895493

Centisome position: 64.45

GC content: 61.75

Gene sequence:

>936_bases
ATGCGGCGTGTGAAATTACTCTGTACGGCGCTGATGCTGCTTGCCAGCCACGGCGCGCTGGCCGTCAGCTATCCGCTGCC
GCCGGAGGGGAGCCGTTTGGTGGGCAGCGCATTTACCATTGCCGTTCCGGACAATAACACCCAGCCGCTGGAAAGTTTTG
CCGCCCAGTACGGCCAGGGGTTAAGCAATATGCTGGAAGCCAACCCCGGGGTCGATGTCTATTTGCCACGCTCCGGTTCG
ACGCTGACCATTCCGCAACAGCTGATCCTGCCCGACACCGTGCGCGAAGGGATCGTGATCAACGTCGCCGAAATGCGTCT
CTATTATTATCCGCCGCTGGGCAACAGCGTCGAAGTGCTGCCAATCGGCATTGGCCAGGCCGGACGCGAAACGCCGCGTA
ACTGGGTGACGGCAGTAGAGCGTAAGCAGGAAGGCCCCACCTGGGTGCCAACCGCCAATACCCGCCGCGAGTATGCGAAA
GAGGGCAAAACCCTGCCGGCGCTGGTGCCTCCCGGGCCCGATAACCCGATGGGACTGTATGCGATCTACATTGGCAGGCT
GTACGCCATCCACGGTACCAACGCCAACTTTGGTATCGGGCTGCGCGTCAGCCAGGGGTGCATCCGCCTGCGCAATGACG
ATATTAAATTCCTGTTTGATAACGTGCCGGTTGGGACGCGGGTTCAGTTGATCGATCAGCCGGTGAAGTACAGCGTGGAG
CCGGACGGCAGTCACTGGCTGGAGGTGCACGAGCCGCTGTCGCGCAACCGCGCGGAGTTTGAATCCGACAGAAAAGTCCC
CTTGCCGATGACCTCGGCGCTGCGCGAGTTTACTCAGGGGCCGGGAGTGAGTCCTTCGCAGGCCGAGCAGACCCTGCAGC
GCCGCTCCGGCATGCCGGTGAATATCAGCGCCACAGCGGCGCAGGGAAGTTTGTAG

Upstream 100 bases:

>100_bases
CGACTATCAGATTTAAGGAAATGCTGGCCAGCGGGTCGGGGAGTGGAAATAACGCTATAATTCACACACGTGAGTCGCGA
CTGAGGAAGGGAAAATGACG

Downstream 100 bases:

>100_bases
CGGGTCGTTTAGTCTGATTAACGGCTATTGTAAGAAGGCTCTTTTGCTGTCGATGCATTCAACGTTGTTGGGAATAAGGA
TCGGGAAACCGATCCTTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MRRVKLLCTALMLLASHGALAVSYPLPPEGSRLVGSAFTIAVPDNNTQPLESFAAQYGQGLSNMLEANPGVDVYLPRSGS
TLTIPQQLILPDTVREGIVINVAEMRLYYYPPLGNSVEVLPIGIGQAGRETPRNWVTAVERKQEGPTWVPTANTRREYAK
EGKTLPALVPPGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKFLFDNVPVGTRVQLIDQPVKYSVE
PDGSHWLEVHEPLSRNRAEFESDRKVPLPMTSALREFTQGPGVSPSQAEQTLQRRSGMPVNISATAAQGSL

Sequences:

>Translated_311_residues
MRRVKLLCTALMLLASHGALAVSYPLPPEGSRLVGSAFTIAVPDNNTQPLESFAAQYGQGLSNMLEANPGVDVYLPRSGS
TLTIPQQLILPDTVREGIVINVAEMRLYYYPPLGNSVEVLPIGIGQAGRETPRNWVTAVERKQEGPTWVPTANTRREYAK
EGKTLPALVPPGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKFLFDNVPVGTRVQLIDQPVKYSVE
PDGSHWLEVHEPLSRNRAEFESDRKVPLPMTSALREFTQGPGVSPSQAEQTLQRRSGMPVNISATAAQGSL
>Mature_311_residues
MRRVKLLCTALMLLASHGALAVSYPLPPEGSRLVGSAFTIAVPDNNTQPLESFAAQYGQGLSNMLEANPGVDVYLPRSGS
TLTIPQQLILPDTVREGIVINVAEMRLYYYPPLGNSVEVLPIGIGQAGRETPRNWVTAVERKQEGPTWVPTANTRREYAK
EGKTLPALVPPGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKFLFDNVPVGTRVQLIDQPVKYSVE
PDGSHWLEVHEPLSRNRAEFESDRKVPLPMTSALREFTQGPGVSPSQAEQTLQRRSGMPVNISATAAQGSL

Specific function: Responsible, at least in part, for anchoring of the major outer membrane lipoprotein (Lpp, also known as the Braun lipoprotein) to the peptidoglycan via a meso-diaminopimelyl-L-Lys- bond on the terminal residue of Lpp [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=308, Percent_Identity=80.1948051948052, Blast_Score=523, Evalue=1e-150,
Organism=Escherichia coli, GI1787040, Length=304, Percent_Identity=61.8421052631579, Blast_Score=391, Evalue=1e-110,
Organism=Escherichia coli, GI1787356, Length=285, Percent_Identity=51.2280701754386, Blast_Score=277, Evalue=7e-76,
Organism=Escherichia coli, GI1787968, Length=311, Percent_Identity=44.3729903536978, Blast_Score=239, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 33938; Mature: 33938

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVKLLCTALMLLASHGALAVSYPLPPEGSRLVGSAFTIAVPDNNTQPLESFAAQYGQG
CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHHCC
LSNMLEANPGVDVYLPRSGSTLTIPQQLILPDTVREGIVINVAEMRLYYYPPLGNSVEVL
HHHHHHCCCCEEEEECCCCCEEECCHHHCCCHHHHCCEEEEEEEEEEEEECCCCCCEEEE
PIGIGQAGRETPRNWVTAVERKQEGPTWVPTANTRREYAKEGKTLPALVPPGPDNPMGLY
EEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCEEE
AIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKFLFDNVPVGTRVQLIDQPVKYSVE
EEEEEEEEEEECCCCCCEEEEEECCCEEEECCCCEEEEECCCCCCCEEEEECCCCEEEEC
PDGSHWLEVHEPLSRNRAEFESDRKVPLPMTSALREFTQGPGVSPSQAEQTLQRRSGMPV
CCCCCEEEECCCHHCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE
NISATAAQGSL
EEEECCCCCCC
>Mature Secondary Structure
MRRVKLLCTALMLLASHGALAVSYPLPPEGSRLVGSAFTIAVPDNNTQPLESFAAQYGQG
CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHHCC
LSNMLEANPGVDVYLPRSGSTLTIPQQLILPDTVREGIVINVAEMRLYYYPPLGNSVEVL
HHHHHHCCCCEEEEECCCCCEEECCHHHCCCHHHHCCEEEEEEEEEEEEECCCCCCEEEE
PIGIGQAGRETPRNWVTAVERKQEGPTWVPTANTRREYAKEGKTLPALVPPGPDNPMGLY
EEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCEEE
AIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKFLFDNVPVGTRVQLIDQPVKYSVE
EEEEEEEEEEECCCCCCEEEEEECCCEEEECCCCEEEEECCCCCCCEEEEECCCCEEEEC
PDGSHWLEVHEPLSRNRAEFESDRKVPLPMTSALREFTQGPGVSPSQAEQTLQRRSGMPV
CCCCCEEEECCCHHCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE
NISATAAQGSL
EEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592411; 9097040; 9278503; 9298646 [H]