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The map label for this gene is yedQ [H]

Identifier: 238895484

GI number: 238895484

Start: 3369131

End: 3370810

Strand: Reverse

Name: yedQ [H]

Synonym: KP1_3555

Alternate gene names: 238895484

Gene position: 3370810-3369131 (Counterclockwise)

Preceding gene: 238895485

Following gene: 238895482

Centisome position: 64.22

GC content: 58.57

Gene sequence:

>1680_bases
ATGGATAAGCCACTGCGGTTGAAGTTAAAAAAGTGCTACCACCTGGCTCGCCCGGCGCATGTGGTTAACGCTTGTTTTAT
CGCAGTGCTGTTTTTCTCCACGCTGCTGATCTGGCGTGAAATCAATGTCCTGGAAGAGGCCTACGTGGCCAACCAGCGTA
ATAATCTGGCTAACGTCGCTCATGAAATGGATGGGCTGTTGCAGTTCAACATCGACAGAATGATGTTTTTTCGCCATGGG
ATGCAGGCGGCGCTCGAACAGCCGCTTGATATCGATGTATTGCGTAAGGCCAGCCAACGCTATCTGAGCCAGCGCCATCA
GCAGGCCTGGCGGGTGGCGCTACCGAATCGGCGTACGCTGCCGGTGTTTGGCATCTCAGGCAGCGTCGCTGGCCACAACC
CTATCCTGCTGGTGGACGATCCGCTGGCGGCTGATGAACTAATGGCGACGCTCGAGCTGGGTTATCTGCTAAATCTGACG
CAGCACGATCGCGATTTCGCCGAGCGGATGCAGTATATCTCTCGTAGCGGCTTTTTTACCTCGACCCTGCCGCTGCGGGA
TGAGTCGCAGGTGATAACGCACTATTCCCAAGCCCTCGGCGCTCCGTGGTTTACCCGCCAGACCCAGCGAAATAATCCGG
GGCGAGGCGTTATCTGGCAAACCTTTCCTGACGATGACCCGCAGCTGGAAGAGCAGGTGGTCACCGCTTCGATACCGTTG
GATTTTGCCGGTTACTGGCGCGGCGTGCTGGCGATGGATTTCTCAGTCAGTGAAATCAAAGCGTTTTTGGTTAGCGCCAT
GCAGGGGGGACAAGAGGGAGAGTACCAACTTTATGATAGCCATTTTAACCTGCTGGCTTCTTCCGCGCCGGGGAATGTCC
TGACCCTGCTGTCGCCGCGCGAGCAGGAGCTGCTGAGCCGCGCGTTTGTCCATGATAACCAGGGAGGGCTGCGTCTGCTG
ACGCGCTATATCAGCTGGGCCAAACTGCGCAATTTTGACGGCGTGCTGCTGCGGATCCACACTCTGCGGGAAGGCGTCCG
CGGGAACTTTGGCACCATCACCATCGCCCTGACCCTGATGTGGGTCCTCTTCACCTTGATGCTGTTGCTCTCCTGGCTGG
TGATCCGCCGCATGGTCCGCAACATGAGCGTTCTGCAAACCTCTCTGGAGTGGCAGGCATGGCACGATGCCTTGACCCGC
CTGCTCAATCGCGGGGCGCTGTTTGAACAGGCGATGGCGGTAGCCAGCGACTGCCAGCGCAGCGGACGGCCGCTGGCGGT
GATCCAGCTCGATCTGGATCATTTTAAGCACATCAACGATCGCTATGGTCATCAGGCGGGGGACAGGGTGCTGTCGATGG
TGGCCAGTACGCTGTCCAGCGCGGTTCGGCAGGGCGATCTGCTGGGCAGAGTGGGCGGAGAAGAGTTTTGTATCGTGATG
CCGAATACCACCCTGCAGGAAGCGGCGGCGGTGGCGGAGCGATTGCGCCAGCGTATCCAGGGACGGGAAGTCTTTTTGCA
TAACAACGTGACGCTGCGGGTTAGCGCCTCGTTAGGGGTGAGCGCCAGCGAAGAGCGGGGGGAGTATCAGTTTGAAGCGC
TGCAGTCGGTGGCCGATGGGCGACTCTATCTGGCCAAGCAAAATGGGCGTAACCAGGTCTGTTTTCGCAGCGCAGCGTGA

Upstream 100 bases:

>100_bases
CGTAACGGCGCCGCGTGTTCTACCCTGAAAACGCCCCGGGTATCGACAGAGACCGGGGCGCTGACGCCGCGAGGTTTGCG
CAACGTATTGCGAGAGAAAG

Downstream 100 bases:

>100_bases
GTAAAACGTTTCGATGCCGATTGGCAAAATGAGAATTATCTTAAAGTGATCGCAGGCGATCGCGCTATCGAATGAAACCG
GTTTGCGGCTAAGCCTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MDKPLRLKLKKCYHLARPAHVVNACFIAVLFFSTLLIWREINVLEEAYVANQRNNLANVAHEMDGLLQFNIDRMMFFRHG
MQAALEQPLDIDVLRKASQRYLSQRHQQAWRVALPNRRTLPVFGISGSVAGHNPILLVDDPLAADELMATLELGYLLNLT
QHDRDFAERMQYISRSGFFTSTLPLRDESQVITHYSQALGAPWFTRQTQRNNPGRGVIWQTFPDDDPQLEEQVVTASIPL
DFAGYWRGVLAMDFSVSEIKAFLVSAMQGGQEGEYQLYDSHFNLLASSAPGNVLTLLSPREQELLSRAFVHDNQGGLRLL
TRYISWAKLRNFDGVLLRIHTLREGVRGNFGTITIALTLMWVLFTLMLLLSWLVIRRMVRNMSVLQTSLEWQAWHDALTR
LLNRGALFEQAMAVASDCQRSGRPLAVIQLDLDHFKHINDRYGHQAGDRVLSMVASTLSSAVRQGDLLGRVGGEEFCIVM
PNTTLQEAAAVAERLRQRIQGREVFLHNNVTLRVSASLGVSASEERGEYQFEALQSVADGRLYLAKQNGRNQVCFRSAA

Sequences:

>Translated_559_residues
MDKPLRLKLKKCYHLARPAHVVNACFIAVLFFSTLLIWREINVLEEAYVANQRNNLANVAHEMDGLLQFNIDRMMFFRHG
MQAALEQPLDIDVLRKASQRYLSQRHQQAWRVALPNRRTLPVFGISGSVAGHNPILLVDDPLAADELMATLELGYLLNLT
QHDRDFAERMQYISRSGFFTSTLPLRDESQVITHYSQALGAPWFTRQTQRNNPGRGVIWQTFPDDDPQLEEQVVTASIPL
DFAGYWRGVLAMDFSVSEIKAFLVSAMQGGQEGEYQLYDSHFNLLASSAPGNVLTLLSPREQELLSRAFVHDNQGGLRLL
TRYISWAKLRNFDGVLLRIHTLREGVRGNFGTITIALTLMWVLFTLMLLLSWLVIRRMVRNMSVLQTSLEWQAWHDALTR
LLNRGALFEQAMAVASDCQRSGRPLAVIQLDLDHFKHINDRYGHQAGDRVLSMVASTLSSAVRQGDLLGRVGGEEFCIVM
PNTTLQEAAAVAERLRQRIQGREVFLHNNVTLRVSASLGVSASEERGEYQFEALQSVADGRLYLAKQNGRNQVCFRSAA
>Mature_559_residues
MDKPLRLKLKKCYHLARPAHVVNACFIAVLFFSTLLIWREINVLEEAYVANQRNNLANVAHEMDGLLQFNIDRMMFFRHG
MQAALEQPLDIDVLRKASQRYLSQRHQQAWRVALPNRRTLPVFGISGSVAGHNPILLVDDPLAADELMATLELGYLLNLT
QHDRDFAERMQYISRSGFFTSTLPLRDESQVITHYSQALGAPWFTRQTQRNNPGRGVIWQTFPDDDPQLEEQVVTASIPL
DFAGYWRGVLAMDFSVSEIKAFLVSAMQGGQEGEYQLYDSHFNLLASSAPGNVLTLLSPREQELLSRAFVHDNQGGLRLL
TRYISWAKLRNFDGVLLRIHTLREGVRGNFGTITIALTLMWVLFTLMLLLSWLVIRRMVRNMSVLQTSLEWQAWHDALTR
LLNRGALFEQAMAVASDCQRSGRPLAVIQLDLDHFKHINDRYGHQAGDRVLSMVASTLSSAVRQGDLLGRVGGEEFCIVM
PNTTLQEAAAVAERLRQRIQGREVFLHNNVTLRVSASLGVSASEERGEYQFEALQSVADGRLYLAKQNGRNQVCFRSAA

Specific function: Involves in the regulation of cellulose production [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=549, Percent_Identity=52.0947176684882, Blast_Score=577, Evalue=1e-166,
Organism=Escherichia coli, GI145693134, Length=161, Percent_Identity=38.5093167701863, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI87081881, Length=188, Percent_Identity=37.2340425531915, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1787262, Length=171, Percent_Identity=33.9181286549708, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI87081974, Length=336, Percent_Identity=26.1904761904762, Blast_Score=100, Evalue=5e-22,
Organism=Escherichia coli, GI1787802, Length=179, Percent_Identity=33.5195530726257, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1788381, Length=178, Percent_Identity=32.5842696629214, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1786584, Length=157, Percent_Identity=32.484076433121, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI87081977, Length=181, Percent_Identity=30.939226519337, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI1787541, Length=162, Percent_Identity=34.5679012345679, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1787056, Length=169, Percent_Identity=32.5443786982249, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1787816, Length=163, Percent_Identity=33.7423312883436, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1788085, Length=164, Percent_Identity=28.6585365853659, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1788956, Length=174, Percent_Identity=32.183908045977, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 63279; Mature: 63279

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKPLRLKLKKCYHLARPAHVVNACFIAVLFFSTLLIWREINVLEEAYVANQRNNLANVA
CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
HEMDGLLQFNIDRMMFFRHGMQAALEQPLDIDVLRKASQRYLSQRHQQAWRVALPNRRTL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCE
PVFGISGSVAGHNPILLVDDPLAADELMATLELGYLLNLTQHDRDFAERMQYISRSGFFT
EEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEE
STLPLRDESQVITHYSQALGAPWFTRQTQRNNPGRGVIWQTFPDDDPQLEEQVVTASIPL
EECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHEECCC
DFAGYWRGVLAMDFSVSEIKAFLVSAMQGGQEGEYQLYDSHFNLLASSAPGNVLTLLSPR
CHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCCCEEEECCCH
EQELLSRAFVHDNQGGLRLLTRYISWAKLRNFDGVLLRIHTLREGVRGNFGTITIALTLM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHCCCCCHHHHHHHHH
WVLFTLMLLLSWLVIRRMVRNMSVLQTSLEWQAWHDALTRLLNRGALFEQAMAVASDCQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SGRPLAVIQLDLDHFKHINDRYGHQAGDRVLSMVASTLSSAVRQGDLLGRVGGEEFCIVM
CCCCEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEC
PNTTLQEAAAVAERLRQRIQGREVFLHNNVTLRVSASLGVSASEERGEYQFEALQSVADG
CCCCHHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCHHCCCHHHHHHHHHCCC
RLYLAKQNGRNQVCFRSAA
EEEEEECCCCCCEEEECCC
>Mature Secondary Structure
MDKPLRLKLKKCYHLARPAHVVNACFIAVLFFSTLLIWREINVLEEAYVANQRNNLANVA
CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
HEMDGLLQFNIDRMMFFRHGMQAALEQPLDIDVLRKASQRYLSQRHQQAWRVALPNRRTL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCE
PVFGISGSVAGHNPILLVDDPLAADELMATLELGYLLNLTQHDRDFAERMQYISRSGFFT
EEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEE
STLPLRDESQVITHYSQALGAPWFTRQTQRNNPGRGVIWQTFPDDDPQLEEQVVTASIPL
EECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHEECCC
DFAGYWRGVLAMDFSVSEIKAFLVSAMQGGQEGEYQLYDSHFNLLASSAPGNVLTLLSPR
CHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCCCEEEECCCH
EQELLSRAFVHDNQGGLRLLTRYISWAKLRNFDGVLLRIHTLREGVRGNFGTITIALTLM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHCCCCCHHHHHHHHH
WVLFTLMLLLSWLVIRRMVRNMSVLQTSLEWQAWHDALTRLLNRGALFEQAMAVASDCQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SGRPLAVIQLDLDHFKHINDRYGHQAGDRVLSMVASTLSSAVRQGDLLGRVGGEEFCIVM
CCCCEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEC
PNTTLQEAAAVAERLRQRIQGREVFLHNNVTLRVSASLGVSASEERGEYQFEALQSVADG
CCCCHHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCHHCCCHHHHHHHHHCCC
RLYLAKQNGRNQVCFRSAA
EEEEEECCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA