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The map label for this gene is yodD [H]

Identifier: 238895483

GI number: 238895483

Start: 3368607

End: 3368831

Strand: Direct

Name: yodD [H]

Synonym: KP1_3554

Alternate gene names: 238895483

Gene position: 3368607-3368831 (Clockwise)

Preceding gene: 238895481

Following gene: 238895486

Centisome position: 64.18

GC content: 57.33

Gene sequence:

>225_bases
ATGATGAAGCACCAATTAACAGGCCAGACCGGGGACGACCTTGACGTCAACGTAGATGCCCTGCTGGCGGCAATTAATGA
GATCAGCGAAAGCGAAGTCCATCGCACGCTGGACGACCCGCAGCGCGCCAGCATTGATGGCCGCGGGTCACATACCTGGC
GTGAGCTGGCGGAGGCATTCGAACTCGATATTCACGATTTCAGCGCCAGTGAAGCCAACCGTTAG

Upstream 100 bases:

>100_bases
AGAACAAAACCACGCAACTCGCAGCGTCGCGGCACGTGACTGGCGCTTTTTTAGACCGACTATACTTAGAGAGGCTTGAG
CGACGCTCAGCGAGGGGGTA

Downstream 100 bases:

>100_bases
CGGCAGGCGAAAAAAATCCCGACTCGCAGGAGTCGGGATCAAACTTGCTAATGCAAGAAGCACTTGAAAATTCGTTACAC
CGGGAAATCCGATGCGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MMKHQLTGQTGDDLDVNVDALLAAINEISESEVHRTLDDPQRASIDGRGSHTWRELAEAFELDIHDFSASEANR

Sequences:

>Translated_74_residues
MMKHQLTGQTGDDLDVNVDALLAAINEISESEVHRTLDDPQRASIDGRGSHTWRELAEAFELDIHDFSASEANR
>Mature_74_residues
MMKHQLTGQTGDDLDVNVDALLAAINEISESEVHRTLDDPQRASIDGRGSHTWRELAEAFELDIHDFSASEANR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082006, Length=62, Percent_Identity=72.5806451612903, Blast_Score=95, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019669 [H]

Pfam domain/function: PF10733 DUF2525 [H]

EC number: NA

Molecular weight: Translated: 8248; Mature: 8248

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKHQLTGQTGDDLDVNVDALLAAINEISESEVHRTLDDPQRASIDGRGSHTWRELAEAF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
ELDIHDFSASEANR
HCCCCCCCCCCCCC
>Mature Secondary Structure
MMKHQLTGQTGDDLDVNVDALLAAINEISESEVHRTLDDPQRASIDGRGSHTWRELAEAF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
ELDIHDFSASEANR
HCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]