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The map label for this gene is yedD [H]

Identifier: 238895480

GI number: 238895480

Start: 3366822

End: 3367253

Strand: Reverse

Name: yedD [H]

Synonym: KP1_3551

Alternate gene names: 238895480

Gene position: 3367253-3366822 (Counterclockwise)

Preceding gene: 238895482

Following gene: 238895478

Centisome position: 64.16

GC content: 59.95

Gene sequence:

>432_bases
ATGAAAAAGTTATTTTTTGCTGGCATGGTGGTGGCGCTGGCCGGTTGCGTACAGGTTGATCGTTATGAGGACGTCGTTAA
AGCGCCGGCGCCGGCTGGCCTTGCAGGTTTCTGGCAAACGAAAGGGCCGCAGAGCGCGATGATGAGTCCTGACGCCATTG
CCAGCCTGATTGTCACCAAAGAAGGGGACACCTTCGACTGCCGCCAGTGGCAGCGCGTGATTGCGCAGCCGGGGAAACTG
ATGAATCGTGACAGTGAGATCTACAACGTGACCGCTTCCCTGGACATCTATCCTGTCGAGCGCGAGGGCAACACGATCTC
CTACGATCGGATGACGTTGTCCCGTGTTGAACGTCTCACTCCGGAGTGCGAGAAGGCGTGGGCCAAAGCGCGAGCGACGG
GGCCCGTCAGCGCGCCGGCCTCCACGCGCTGA

Upstream 100 bases:

>100_bases
TTAGCGGTTGCTGGCTTGCTCGCTTATCCCTTTGCGGTGGGGGTGGAAGGCTTAACGCTTTAATGCCACAATACTTTTTT
ATCGGCTTGTGGGATGAATG

Downstream 100 bases:

>100_bases
GATTTTGGCGGGCCATAGCTGGCCCGCCCGGCGTCAGAGGACTACAATACCTCCTCTAACACCCACACGCTCACGCTCCC
CCCGTTACATGTAAAGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKKLFFAGMVVALAGCVQVDRYEDVVKAPAPAGLAGFWQTKGPQSAMMSPDAIASLIVTKEGDTFDCRQWQRVIAQPGKL
MNRDSEIYNVTASLDIYPVEREGNTISYDRMTLSRVERLTPECEKAWAKARATGPVSAPASTR

Sequences:

>Translated_143_residues
MKKLFFAGMVVALAGCVQVDRYEDVVKAPAPAGLAGFWQTKGPQSAMMSPDAIASLIVTKEGDTFDCRQWQRVIAQPGKL
MNRDSEIYNVTASLDIYPVEREGNTISYDRMTLSRVERLTPECEKAWAKARATGPVSAPASTR
>Mature_143_residues
MKKLFFAGMVVALAGCVQVDRYEDVVKAPAPAGLAGFWQTKGPQSAMMSPDAIASLIVTKEGDTFDCRQWQRVIAQPGKL
MNRDSEIYNVTASLDIYPVEREGNTISYDRMTLSRVERLTPECEKAWAKARATGPVSAPASTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788237, Length=136, Percent_Identity=60.2941176470588, Blast_Score=149, Evalue=5e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15701; Mature: 15701

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFFAGMVVALAGCVQVDRYEDVVKAPAPAGLAGFWQTKGPQSAMMSPDAIASLIVTK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEC
EGDTFDCRQWQRVIAQPGKLMNRDSEIYNVTASLDIYPVEREGNTISYDRMTLSRVERLT
CCCCCCHHHHHHHHHCCCHHCCCCCCEEEEEECEEEEEECCCCCEEEHHHHHHHHHHHCC
PECEKAWAKARATGPVSAPASTR
HHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKKLFFAGMVVALAGCVQVDRYEDVVKAPAPAGLAGFWQTKGPQSAMMSPDAIASLIVTK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEC
EGDTFDCRQWQRVIAQPGKLMNRDSEIYNVTASLDIYPVEREGNTISYDRMTLSRVERLT
CCCCCCHHHHHHHHHCCCHHCCCCCCEEEEEECEEEEEECCCCCEEEHHHHHHHHHHHCC
PECEKAWAKARATGPVSAPASTR
HHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8371104; 11677609 [H]