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The map label for this gene is holE [H]

Identifier: 238895420

GI number: 238895420

Start: 3306363

End: 3306605

Strand: Direct

Name: holE [H]

Synonym: KP1_3487

Alternate gene names: 238895420

Gene position: 3306363-3306605 (Clockwise)

Preceding gene: 238895416

Following gene: 238895421

Centisome position: 63.0

GC content: 53.91

Gene sequence:

>243_bases
GTGGAGTGGATGATGGAAAGAAATCTGGCCAAAATTTCGCAAGATGAGATGGATAAAGTCAATGTCGATCTCGCCGCCGC
CGGCGTTGCTTTTAAGGAGCGGTACAATATGCCGGTGGTCGCTGATTTAGTCGAGCGTGAACAGCCTGCACATCTGCGCG
ACTGGTTCCGTGAACGACTGATCGCCCATCGGTTGGCCTCCGTCTCCCTTTCGCGGCTACCGTGGGAGCCGAAACAGAAA
TAA

Upstream 100 bases:

>100_bases
ATTCGTCATTCCCTTTTGTTATGTCTGTAGCACAGAGAATAACCCTGTATAATGCCAGAGTCGAGCCAGGCATCTGGCCC
TGACCGGATTTATAAGCAGA

Downstream 100 bases:

>100_bases
TGCGCGCTCGCCTCCTCCCCGTCGGTTGGCAAGCCCGGCCAATTCCATTACGCTTATTGTTTTGCTCTGGAGCGAGCCAT
GCTGCGCGTCATTGATACCG

Product: DNA polymerase III subunit theta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MEWMMERNLAKISQDEMDKVNVDLAAAGVAFKERYNMPVVADLVEREQPAHLRDWFRERLIAHRLASVSLSRLPWEPKQK

Sequences:

>Translated_80_residues
MEWMMERNLAKISQDEMDKVNVDLAAAGVAFKERYNMPVVADLVEREQPAHLRDWFRERLIAHRLASVSLSRLPWEPKQK
>Mature_80_residues
MEWMMERNLAKISQDEMDKVNVDLAAAGVAFKERYNMPVVADLVEREQPAHLRDWFRERLIAHRLASVSLSRLPWEPKQK

Specific function: The exact function of the theta subunit is unknown [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788147, Length=76, Percent_Identity=82.8947368421053, Blast_Score=131, Evalue=8e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009052
- InterPro:   IPR011325
- ProDom:   PD057609 [H]

Pfam domain/function: PF06440 DNA_pol3_theta [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 9449; Mature: 9449

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWMMERNLAKISQDEMDKVNVDLAAAGVAFKERYNMPVVADLVEREQPAHLRDWFRERL
CCCHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHH
IAHRLASVSLSRLPWEPKQK
HHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEWMMERNLAKISQDEMDKVNVDLAAAGVAFKERYNMPVVADLVEREQPAHLRDWFRERL
CCCHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHH
IAHRLASVSLSRLPWEPKQK
HHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]