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The map label for this gene is yobD [C]

Identifier: 238895395

GI number: 238895395

Start: 3282757

End: 3283215

Strand: Direct

Name: yobD [C]

Synonym: KP1_3461

Alternate gene names: 238895395

Gene position: 3282757-3283215 (Clockwise)

Preceding gene: 238895394

Following gene: 238895396

Centisome position: 62.55

GC content: 50.54

Gene sequence:

>459_bases
ATGACCTTCACGGACCTGGTGATCATCCTGTTTATCCTTGCGCTACTGGCCTACGCGATATATGACCAGTTTATTATGCC
GAGGCGAAACGGCCCGGTACTGCTGGCCATCCCCCTGCTTCGCCGCAGTCGCGTTGACGGCATGATCTTTGTCGGCCTCA
CCGCCATTCTGATCTATAACAACATCACCCAGCACGGCACGGCGATCACCACCTGGCTATTATCTGCGCTGGCGCTGATG
GGGCTCTATTTATTCTGGATCCGTACGCCGAAAATCATTTTTAAACCGCGCGGCTTTTTCTTCGCCAACGTGTGGATAGA
ATATCAGCGGATTAAAGAGATGAATTTATCCGAGGACGGTGTGCTGGTGATGCAATTAGAGCAACGGCGGCTGCTGATAC
GCGTACGAAATATCGACGATCTGGAGAAGATATACAAACTTCTCATTACAACTCAATGA

Upstream 100 bases:

>100_bases
GTATCGCCGGCTACGCGGTCGGCCTGCTGGGTCTGTAATTTCCAGGCTGTACGCCGGGGGCTTGCCCCCGGCTTTTTTTT
ATCAGGAGAAACGCAAAGCA

Downstream 100 bases:

>100_bases
CTTAAAAATATAGCCAGCGCTATATTATTCCCGTTAGCAGCGGAGAAATATTATAGCCACGGCTATATTTCCCGCCTAAC
CTTATCTTTTTTATTAACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTFTDLVIILFILALLAYAIYDQFIMPRRNGPVLLAIPLLRRSRVDGMIFVGLTAILIYNNITQHGTAITTWLLSALALM
GLYLFWIRTPKIIFKPRGFFFANVWIEYQRIKEMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLITTQ

Sequences:

>Translated_152_residues
MTFTDLVIILFILALLAYAIYDQFIMPRRNGPVLLAIPLLRRSRVDGMIFVGLTAILIYNNITQHGTAITTWLLSALALM
GLYLFWIRTPKIIFKPRGFFFANVWIEYQRIKEMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLITTQ
>Mature_151_residues
TFTDLVIILFILALLAYAIYDQFIMPRRNGPVLLAIPLLRRSRVDGMIFVGLTAILIYNNITQHGTAITTWLLSALALMG
LYLFWIRTPKIIFKPRGFFFANVWIEYQRIKEMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLITTQ

Specific function: Unknown

COG id: COG4811

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0266 family [H]

Homologues:

Organism=Escherichia coli, GI1788123, Length=152, Percent_Identity=84.2105263157895, Blast_Score=263, Evalue=3e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009328
- ProDom:   PD091196 [H]

Pfam domain/function: PF06173 DUF986 [H]

EC number: NA

Molecular weight: Translated: 17792; Mature: 17661

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFTDLVIILFILALLAYAIYDQFIMPRRNGPVLLAIPLLRRSRVDGMIFVGLTAILIYN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHH
NITQHGTAITTWLLSALALMGLYLFWIRTPKIIFKPRGFFFANVWIEYQRIKEMNLSEDG
CCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHHHHHHHHCCCCCCC
VLVMQLEQRRLLIRVRNIDDLEKIYKLLITTQ
EEEEEECCCEEEEEECCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFTDLVIILFILALLAYAIYDQFIMPRRNGPVLLAIPLLRRSRVDGMIFVGLTAILIYN
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHH
NITQHGTAITTWLLSALALMGLYLFWIRTPKIIFKPRGFFFANVWIEYQRIKEMNLSEDG
CCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHHHHHHHHCCCCCCC
VLVMQLEQRRLLIRVRNIDDLEKIYKLLITTQ
EEEEEECCCEEEEEECCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA