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The map label for this gene is yoaA [H]

Identifier: 238895384

GI number: 238895384

Start: 3270071

End: 3271981

Strand: Reverse

Name: yoaA [H]

Synonym: KP1_3450

Alternate gene names: 238895384

Gene position: 3271981-3270071 (Counterclockwise)

Preceding gene: 238895386

Following gene: 238895383

Centisome position: 62.34

GC content: 62.48

Gene sequence:

>1911_bases
GTGATCGACGATTTTGCAGCAGACGGCCAGCTAGCCAAAGCCATACCGGGATTTAAACCGCGCGAGCCGCAGCGCCAGAT
GGCGGTGGCGGTCAGCGAAGCGATTGAGGCCTCCCGGCCGCTGGTGGTGGAAGCGGGGACCGGAACCGGTAAAACCTACG
CTTACCTGGCGCCTGCGCTGCGGGCGAAAAAAAAGGTGATTATCTCCACCGGCTCGAAAGCGCTGCAGGATCAGCTTTAC
AGCCGCGATCTGCCTACCGTCGCCAAAGCGCTCAAATTCACCGGGAAACTGGCGCTGCTCAAAGGGCGTTCCAACTACCT
GTGTCTCGAACGTCTTGAGCAGCAGGCGCTGGCGGGCGGCGATCTGCCGGTGCAAACCCTCAGCGATGTGATCCTCCTGC
GCTCCTGGTCGAATCAAACCCAGGATGGCGATATCAGCACCTGCGCCAGCGTCGCGGAAGACTCTCAGGCCTGGCCGCTG
GTCACCAGCACCAACGATAACTGTCTCGGTAGCGACTGCCCACTGTATAAAGATTGCTTCGTGGTGAAGGCGCGTAAAAA
AGCGATGGACGCCGACGTGGTGGTGGTCAACCATCACCTGTTCCTGGCCGATATGGTGGTCAAAGAGAGCGGCTTTGCCG
AGCTGATCCCCGAGGCGGAAGTGATGATCTTCGATGAAGCCCATCAGCTGCCGGATATCGCCAGTCAGTACTTTGGCCAG
TCGCTCTCCAGCCGCCAGCTGCTGGACCTGGCGAAAGACATCACCATTGCCTACCGCACCGAACTGAAAGACACTCAGCA
GCTGCAAAAATGCGCCGACCGCCTGGCGCAAAGCGCGCAGGATTTCCGCCTGCAGCTGGGAGACCCGGGCTACCGCGGCA
ATCTGCGCGAGCTGCTGGCGGACAGCCACATTCAGCGAGCGCTGCTGCTGCTTGATGACGCGCTCGAGCTATGCTATGAC
GTCGCCAAACTTTCGCTGGGTCGCTCGGCGCTGCTCGACGCCGCTTTTGAGCGCGCCACCCTCTATCGCGGGCGCCTGAA
GCGGTTGAAAGAGATCAACCAGCCGGGCTACAGCTACTGGTATGAGTGTACCTCGCGCCACTTTACTCTCGCGCTGACGC
CGCTGACCGTGGCCGAGAAGTTTAAAGAGGTGATGGCGCAGAAGTCGGGGAGCTGGATCTTTACCTCGGCGACGCTGTCG
GTGAACGACGATCTGCATCACTTTACCGCCCGGCTGGGGATCGACGAGGCGCAGACTCTGCTGCTGCCGAGTCCCTTTGA
CTATCAGCACCAGGCGCTGCTCTGCGTGCCGCGCAACCTACCCCTGCCGAACCAGCCCGGCGCAGCGCGACACCTGGCGG
CGATGCTCAAGCCGCTGATCGAGGCCAACGATGGTCGCTGCTTTATGTTGTGCACCTCGCACGCCATGATGCGCGATCTG
GCGGAGCAGTTCCGCGCCACCATGACGCTACCGGTGCTGCTGCAGGGCGAGACCAGTAAAGGCCAGCTGCTGCAGCAGTT
CGTCAGCGCCGGCAACGCGCTGCTGGTGGCTACCAGCAGCTTCTGGGAGGGAGTCGATGTGCGCGGCGACGCGCTGTCGC
TGGTGATTATCGATAAGCTACCGTTCACCTCGCCGGACGATCCGCTGCTAAAAGCGCGGATGGAAGATTGCCGGCTGCGC
GGCGGCGATCCCTTCGATGAAGTGCAGCTCCCGGATGCGGTGATCACCCTCAAGCAGGGGGTGGGTCGCCTGATCCGCGA
TATCGACGATCGCGGGGTGCTGGTGATCTGCGACAACCGGTTGGTGATGCGCCCCTACGGCGCGGTGTTCCTGGCCAGTC
TGCCGCCGGCGCCGCGAACCCGCGATATCCGTCGGGCGGTGCGCTTTCTCGCCGTACCGCCGGCAAGGTAA

Upstream 100 bases:

>100_bases
TGCGGCAAGACTGCCATAATGTGCCGCTCGCGTCACTACCCGGACTGGCGAAACGCCGTCCTCCCTGACATAATCACTGT
CCAAATAACCAGGGGGCAAT

Downstream 100 bases:

>100_bases
TCCGCACTAAAATGTGTTAAGCTGCGCGCCATTTTGTTAATTAGCGGTTCCCAATAGACTTCGGGCGGCATGGCGGCGGG
TTGGCCGTTTGCCGGAAAGC

Product: putative ATP-dependent helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 636; Mature: 636

Protein sequence:

>636_residues
MIDDFAADGQLAKAIPGFKPREPQRQMAVAVSEAIEASRPLVVEAGTGTGKTYAYLAPALRAKKKVIISTGSKALQDQLY
SRDLPTVAKALKFTGKLALLKGRSNYLCLERLEQQALAGGDLPVQTLSDVILLRSWSNQTQDGDISTCASVAEDSQAWPL
VTSTNDNCLGSDCPLYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFAELIPEAEVMIFDEAHQLPDIASQYFGQ
SLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGDPGYRGNLRELLADSHIQRALLLLDDALELCYD
VAKLSLGRSALLDAAFERATLYRGRLKRLKEINQPGYSYWYECTSRHFTLALTPLTVAEKFKEVMAQKSGSWIFTSATLS
VNDDLHHFTARLGIDEAQTLLLPSPFDYQHQALLCVPRNLPLPNQPGAARHLAAMLKPLIEANDGRCFMLCTSHAMMRDL
AEQFRATMTLPVLLQGETSKGQLLQQFVSAGNALLVATSSFWEGVDVRGDALSLVIIDKLPFTSPDDPLLKARMEDCRLR
GGDPFDEVQLPDAVITLKQGVGRLIRDIDDRGVLVICDNRLVMRPYGAVFLASLPPAPRTRDIRRAVRFLAVPPAR

Sequences:

>Translated_636_residues
MIDDFAADGQLAKAIPGFKPREPQRQMAVAVSEAIEASRPLVVEAGTGTGKTYAYLAPALRAKKKVIISTGSKALQDQLY
SRDLPTVAKALKFTGKLALLKGRSNYLCLERLEQQALAGGDLPVQTLSDVILLRSWSNQTQDGDISTCASVAEDSQAWPL
VTSTNDNCLGSDCPLYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFAELIPEAEVMIFDEAHQLPDIASQYFGQ
SLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGDPGYRGNLRELLADSHIQRALLLLDDALELCYD
VAKLSLGRSALLDAAFERATLYRGRLKRLKEINQPGYSYWYECTSRHFTLALTPLTVAEKFKEVMAQKSGSWIFTSATLS
VNDDLHHFTARLGIDEAQTLLLPSPFDYQHQALLCVPRNLPLPNQPGAARHLAAMLKPLIEANDGRCFMLCTSHAMMRDL
AEQFRATMTLPVLLQGETSKGQLLQQFVSAGNALLVATSSFWEGVDVRGDALSLVIIDKLPFTSPDDPLLKARMEDCRLR
GGDPFDEVQLPDAVITLKQGVGRLIRDIDDRGVLVICDNRLVMRPYGAVFLASLPPAPRTRDIRRAVRFLAVPPAR
>Mature_636_residues
MIDDFAADGQLAKAIPGFKPREPQRQMAVAVSEAIEASRPLVVEAGTGTGKTYAYLAPALRAKKKVIISTGSKALQDQLY
SRDLPTVAKALKFTGKLALLKGRSNYLCLERLEQQALAGGDLPVQTLSDVILLRSWSNQTQDGDISTCASVAEDSQAWPL
VTSTNDNCLGSDCPLYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFAELIPEAEVMIFDEAHQLPDIASQYFGQ
SLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGDPGYRGNLRELLADSHIQRALLLLDDALELCYD
VAKLSLGRSALLDAAFERATLYRGRLKRLKEINQPGYSYWYECTSRHFTLALTPLTVAEKFKEVMAQKSGSWIFTSATLS
VNDDLHHFTARLGIDEAQTLLLPSPFDYQHQALLCVPRNLPLPNQPGAARHLAAMLKPLIEANDGRCFMLCTSHAMMRDL
AEQFRATMTLPVLLQGETSKGQLLQQFVSAGNALLVATSSFWEGVDVRGDALSLVIIDKLPFTSPDDPLLKARMEDCRLR
GGDPFDEVQLPDAVITLKQGVGRLIRDIDDRGVLVICDNRLVMRPYGAVFLASLPPAPRTRDIRRAVRFLAVPPAR

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=636, Percent_Identity=92.1383647798742, Blast_Score=1210, Evalue=0.0,
Organism=Escherichia coli, GI1787018, Length=702, Percent_Identity=28.0626780626781, Blast_Score=197, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR006935 [H]

Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 70242; Mature: 70242

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDDFAADGQLAKAIPGFKPREPQRQMAVAVSEAIEASRPLVVEAGTGTGKTYAYLAPAL
CCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
RAKKKVIISTGSKALQDQLYSRDLPTVAKALKFTGKLALLKGRSNYLCLERLEQQALAGG
HCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCC
DLPVQTLSDVILLRSWSNQTQDGDISTCASVAEDSQAWPLVTSTNDNCLGSDCPLYKDCF
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHH
VVKARKKAMDADVVVVNHHLFLADMVVKESGFAELIPEAEVMIFDEAHQLPDIASQYFGQ
HHHHHHHCCCCCEEEEECHHHHHHHHHHCCCHHHHCCCCEEEEECCHHCCHHHHHHHHCC
SLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGDPGYRGNLRELLA
CCCHHHHHHHHHHCEEEEHHCCHHHHHHHHHHHHHHCCHHHCEEEECCCCCCCCHHHHHH
DSHIQRALLLLDDALELCYDVAKLSLGRSALLDAAFERATLYRGRLKRLKEINQPGYSYW
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
YECTSRHFTLALTPLTVAEKFKEVMAQKSGSWIFTSATLSVNDDLHHFTARLGIDEAQTL
HHHCCCEEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCEE
LLPSPFDYQHQALLCVPRNLPLPNQPGAARHLAAMLKPLIEANDGRCFMLCTSHAMMRDL
ECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH
AEQFRATMTLPVLLQGETSKGQLLQQFVSAGNALLVATSSFWEGVDVRGDALSLVIIDKL
HHHHHHHEEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEECC
PFTSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDIDDRGVLVICDNR
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCE
LVMRPYGAVFLASLPPAPRTRDIRRAVRFLAVPPAR
EEECCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIDDFAADGQLAKAIPGFKPREPQRQMAVAVSEAIEASRPLVVEAGTGTGKTYAYLAPAL
CCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
RAKKKVIISTGSKALQDQLYSRDLPTVAKALKFTGKLALLKGRSNYLCLERLEQQALAGG
HCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCC
DLPVQTLSDVILLRSWSNQTQDGDISTCASVAEDSQAWPLVTSTNDNCLGSDCPLYKDCF
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHH
VVKARKKAMDADVVVVNHHLFLADMVVKESGFAELIPEAEVMIFDEAHQLPDIASQYFGQ
HHHHHHHCCCCCEEEEECHHHHHHHHHHCCCHHHHCCCCEEEEECCHHCCHHHHHHHHCC
SLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGDPGYRGNLRELLA
CCCHHHHHHHHHHCEEEEHHCCHHHHHHHHHHHHHHCCHHHCEEEECCCCCCCCHHHHHH
DSHIQRALLLLDDALELCYDVAKLSLGRSALLDAAFERATLYRGRLKRLKEINQPGYSYW
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
YECTSRHFTLALTPLTVAEKFKEVMAQKSGSWIFTSATLSVNDDLHHFTARLGIDEAQTL
HHHCCCEEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCEE
LLPSPFDYQHQALLCVPRNLPLPNQPGAARHLAAMLKPLIEANDGRCFMLCTSHAMMRDL
ECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH
AEQFRATMTLPVLLQGETSKGQLLQQFVSAGNALLVATSSFWEGVDVRGDALSLVIIDKL
HHHHHHHEEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEECC
PFTSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDIDDRGVLVICDNR
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCE
LVMRPYGAVFLASLPPAPRTRDIRRAVRFLAVPPAR
EEECCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]