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The map label for this gene is 238895307

Identifier: 238895307

GI number: 238895307

Start: 3190436

End: 3191893

Strand: Reverse

Name: 238895307

Synonym: KP1_3364

Alternate gene names: NA

Gene position: 3191893-3190436 (Counterclockwise)

Preceding gene: 238895308

Following gene: 238895306

Centisome position: 60.82

GC content: 65.23

Gene sequence:

>1458_bases
TTGACGCCCGCTCCGCCCTCTAATCTCTCGCTGAAAGACATCATGATGACAACACACCACGACCGTCACTATAAAGCCGG
TGGCGACCCGCGCACGCTGGCTGATTTTATGGCCCTGCGTGCGGAAATGAACAAGCTCAGCCACCCGGCGCGGCCGGATA
TTAACTGGCCGTATGCCGAGCAGCTTGCCCGCGGGCTGTTGGAGCATCACGGCGCGGACCTGCAGACTGTCGCCTGGTAT
ACCCTGGCCCGCGCCCGGCTGGGCGGGGTGGCAGGGATCAATGAGGGGCTGACGCTGATGGAGTCGCTGCTGGTTCGTCA
GGGGAAAAACCTGTGGCCACAGGCGCTCCCGGCCCGGACAGAGATCTTCCGCACCCTGAGCAAGCGGCTGCGGCAGGTGA
TCCGTACCCTGAATCTTACCCCAGAGGATGTTGAGTCGCTTGAGCAGGCTGAACGTTCGCTGCAAAGCTTCGACGCAGTA
CTCCAGCGCCTTGAGATCGCTCCTGAAAACCAGCTGAGCGACCTGCGGGCGCTACTGCACAGCACGGCAACTCGCTTCGA
GAGCCTCGACCCTGCGCCAGCGCTTCCCACCGCGCCGCCGGTGGCGGTGTCTGACGCGGAACTTCCCGGCACTCTGGTCA
GCGAAGAGGATGCGGCGAAGGTTGAGCCAGTGCCAGACCTAAAACGTAGACCAAAGGCTGAGCCGCTGGCTCCGCCTTCA
CCTGCAAAGCGGCCCGCGCCGGTGGCGGCGTCTACTCCCGCAGCCGCGCCGCGCTGGAAGCCGTTTATCGCCGGGATGGT
TACCATGCTGGCGGTAACGGGTATCGCCGTCGGCGGATGGCTGGCGCTGCGTCAGTCCGACTTGCCGCCCATTTCGGTCA
CCCAAAATGCCGGACCGATACCGGGCCTGCCGGCGACAACGCCCCCGGGGCCGGTTGATCTGCCACAGACGCAGCGCCAG
CTTGGCGAGCTTGCCCGCCTGGCGCCGGACTGGGCGGTCAGCTACGGCGACCAGCTGGTCCACCAGGCCCTGATCCGCTG
GCCGGATCAGGCGCAACCGCTGGCGCAGCAGTGGCGGCAGCAGCTGAGTGCTGGCGCATTGCCCGCGGAAAACCTTACCG
GCTGGTCGGAGGGCATGCAGCAACTGCAGCGGCTCGCCGACCAGCTCAATGCCCTCGACGAGCAGAAGGGGAAGTACCTG
ACGGTGAGCGAACTGAAAACCGCAGTATTTGCCATCACGCAGTCGTTTAACCGCGCTGTTCCGCTGGAGGAGCAGCTGCG
CCAGCTGGCCGCGCTTCCCGTTGATCAACCCTGGCCAGCCGCGCGGGGAAGCCTCGCGGAGCTGCATCTGCAACAGCTGA
TAGTGGAGTATGCCCTGCTGAAGCGAAAACAGCCGGCGTCGCCGACCGCTGCGCTCCCCGCAACCGGTGAGCCCTCGGTG
AGTGAGGCGGTGAAATAA

Upstream 100 bases:

>100_bases
ATTGATGCGGAGCTGAAGGATATTGGCCTGGTGCGTTACGGCACGGAGTTTATGCCCGAGGGCAGGGTGTTGATCCGCCA
CCTCAAACGTCAGCAGTACC

Downstream 100 bases:

>100_bases
AGTGTGCGCATGGCAACATTTTCTTTACATCAATATTGCAAGAACCGAACGCCCTTCGTAGTCTGAAAATGATTTAAATA
TACCGTTTGCAGTTGTATTG

Product: hypothetical protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; OmpA/MotB Domain-Containing Protein; Type VI Secretion System Protein VasL

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MTPAPPSNLSLKDIMMTTHHDRHYKAGGDPRTLADFMALRAEMNKLSHPARPDINWPYAEQLARGLLEHHGADLQTVAWY
TLARARLGGVAGINEGLTLMESLLVRQGKNLWPQALPARTEIFRTLSKRLRQVIRTLNLTPEDVESLEQAERSLQSFDAV
LQRLEIAPENQLSDLRALLHSTATRFESLDPAPALPTAPPVAVSDAELPGTLVSEEDAAKVEPVPDLKRRPKAEPLAPPS
PAKRPAPVAASTPAAAPRWKPFIAGMVTMLAVTGIAVGGWLALRQSDLPPISVTQNAGPIPGLPATTPPGPVDLPQTQRQ
LGELARLAPDWAVSYGDQLVHQALIRWPDQAQPLAQQWRQQLSAGALPAENLTGWSEGMQQLQRLADQLNALDEQKGKYL
TVSELKTAVFAITQSFNRAVPLEEQLRQLAALPVDQPWPAARGSLAELHLQQLIVEYALLKRKQPASPTAALPATGEPSV
SEAVK

Sequences:

>Translated_485_residues
MTPAPPSNLSLKDIMMTTHHDRHYKAGGDPRTLADFMALRAEMNKLSHPARPDINWPYAEQLARGLLEHHGADLQTVAWY
TLARARLGGVAGINEGLTLMESLLVRQGKNLWPQALPARTEIFRTLSKRLRQVIRTLNLTPEDVESLEQAERSLQSFDAV
LQRLEIAPENQLSDLRALLHSTATRFESLDPAPALPTAPPVAVSDAELPGTLVSEEDAAKVEPVPDLKRRPKAEPLAPPS
PAKRPAPVAASTPAAAPRWKPFIAGMVTMLAVTGIAVGGWLALRQSDLPPISVTQNAGPIPGLPATTPPGPVDLPQTQRQ
LGELARLAPDWAVSYGDQLVHQALIRWPDQAQPLAQQWRQQLSAGALPAENLTGWSEGMQQLQRLADQLNALDEQKGKYL
TVSELKTAVFAITQSFNRAVPLEEQLRQLAALPVDQPWPAARGSLAELHLQQLIVEYALLKRKQPASPTAALPATGEPSV
SEAVK
>Mature_484_residues
TPAPPSNLSLKDIMMTTHHDRHYKAGGDPRTLADFMALRAEMNKLSHPARPDINWPYAEQLARGLLEHHGADLQTVAWYT
LARARLGGVAGINEGLTLMESLLVRQGKNLWPQALPARTEIFRTLSKRLRQVIRTLNLTPEDVESLEQAERSLQSFDAVL
QRLEIAPENQLSDLRALLHSTATRFESLDPAPALPTAPPVAVSDAELPGTLVSEEDAAKVEPVPDLKRRPKAEPLAPPSP
AKRPAPVAASTPAAAPRWKPFIAGMVTMLAVTGIAVGGWLALRQSDLPPISVTQNAGPIPGLPATTPPGPVDLPQTQRQL
GELARLAPDWAVSYGDQLVHQALIRWPDQAQPLAQQWRQQLSAGALPAENLTGWSEGMQQLQRLADQLNALDEQKGKYLT
VSELKTAVFAITQSFNRAVPLEEQLRQLAALPVDQPWPAARGSLAELHLQQLIVEYALLKRKQPASPTAALPATGEPSVS
EAVK

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52740; Mature: 52609

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAPPSNLSLKDIMMTTHHDRHYKAGGDPRTLADFMALRAEMNKLSHPARPDINWPYAE
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
QLARGLLEHHGADLQTVAWYTLARARLGGVAGINEGLTLMESLLVRQGKNLWPQALPART
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCCCCCHHCCHHH
EIFRTLSKRLRQVIRTLNLTPEDVESLEQAERSLQSFDAVLQRLEIAPENQLSDLRALLH
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
STATRFESLDPAPALPTAPPVAVSDAELPGTLVSEEDAAKVEPVPDLKRRPKAEPLAPPS
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
PAKRPAPVAASTPAAAPRWKPFIAGMVTMLAVTGIAVGGWLALRQSDLPPISVTQNAGPI
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC
PGLPATTPPGPVDLPQTQRQLGELARLAPDWAVSYGDQLVHQALIRWPDQAQPLAQQWRQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
QLSAGALPAENLTGWSEGMQQLQRLADQLNALDEQKGKYLTVSELKTAVFAITQSFNRAV
HHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCC
PLEEQLRQLAALPVDQPWPAARGSLAELHLQQLIVEYALLKRKQPASPTAALPATGEPSV
CHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
SEAVK
HHHCC
>Mature Secondary Structure 
TPAPPSNLSLKDIMMTTHHDRHYKAGGDPRTLADFMALRAEMNKLSHPARPDINWPYAE
CCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
QLARGLLEHHGADLQTVAWYTLARARLGGVAGINEGLTLMESLLVRQGKNLWPQALPART
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCCCCCHHCCHHH
EIFRTLSKRLRQVIRTLNLTPEDVESLEQAERSLQSFDAVLQRLEIAPENQLSDLRALLH
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
STATRFESLDPAPALPTAPPVAVSDAELPGTLVSEEDAAKVEPVPDLKRRPKAEPLAPPS
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
PAKRPAPVAASTPAAAPRWKPFIAGMVTMLAVTGIAVGGWLALRQSDLPPISVTQNAGPI
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC
PGLPATTPPGPVDLPQTQRQLGELARLAPDWAVSYGDQLVHQALIRWPDQAQPLAQQWRQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
QLSAGALPAENLTGWSEGMQQLQRLADQLNALDEQKGKYLTVSELKTAVFAITQSFNRAV
HHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCC
PLEEQLRQLAALPVDQPWPAARGSLAELHLQQLIVEYALLKRKQPASPTAALPATGEPSV
CHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
SEAVK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA