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The map label for this gene is oppC [H]

Identifier: 238895254

GI number: 238895254

Start: 3130748

End: 3131656

Strand: Reverse

Name: oppC [H]

Synonym: KP1_3306

Alternate gene names: 238895254

Gene position: 3131656-3130748 (Counterclockwise)

Preceding gene: 238895255

Following gene: 238895253

Centisome position: 59.67

GC content: 59.08

Gene sequence:

>909_bases
ATGATGTTAAGTAAGAAAAATAGCGAGGCGCTGGAAAACTTCAGTGAGAAGCTGGAAGTGGAGGGGCGTAGCCTCTGGCA
GGACGCGCGTCGCCGCTTTATGCATAACCGCGCCGCGGTGACCAGCCTGATTATGCTGGTGCTTATTGCGCTGTTCGTTA
CCTTCGCGCCGATGGTGTCGTCGTTCTCCTACTTCGATACCGACTGGGGCATGATGTCCAATGCCCCGGATATGGCCTCC
GGCCACTACTTCGGAACCGACTCCTCCGGGCGCGACCTGCTGGTGCGCGTAGCGATCGGCGGGCGCATTTCGCTGATGGT
CGGGGTGGCGGCGGCGCTGGTGGCGGTGATCCTCGGCACGCTGTACGGTTCTCTCTCCGGTTATCTCGGCGGCAAAGTGG
ATTCGGTCATGATGCGTCTGCTGGAGATCCTCAACTCCTTCCCGTTTATGTTCTTCGTCATCCTGCTGGTGACCTTTTTT
GGTCAGAATATCCTGCTGATCTTTGTCGCCATCGGAATGGTGTCCTGGCTGGATATGGCGCGTATCGTGCGCGGGCAGAC
GCTAAGCCTGAAGCGCAAAGAGTTTATCGAAGCCGCGCAGGTCGGCGGGGTCTCGACGGCGAGCATCGTTCTGCGCCATA
TCGTCCCCAACGTGCTGGGGGTGGTGGTGGTGTATGCCTCGCTGCTGGTCCCCAGCATGATCCTCTTCGAATCCTTCCTC
AGTTTCCTGGGACTGGGGACGCAGGAGCCGCTCAGCAGCTGGGGGGCATTGCTCAGCGATGGCGCCAACTCAATGGAAGT
TTCGCCCTGGCTACTGTTGTTCCCGGCGGGTTTCCTGGTGGTGACCCTGTTCTGTTTCAACTTTATCGGCGATGGTCTGC
GTGATGCCCTCGACCCGAAAGACCGCTAA

Upstream 100 bases:

>100_bases
CGATCCTCGTTGGCGCCCTGACTATCCTGTTCAACGCCATCGTTGACGTGCTGTACGCCGTTATCGATCCGAAGATTCGC
TACTGAAGCCGGAGTTCGCC

Downstream 100 bases:

>100_bases
GGAGCGCTGCCATGACCATGATTGAAACGGCAAAAGCGCCGCAAGCGCAGAGCCACAGCGGGCTACTGCTGGACGTGAAA
GATCTTCGCGTCACCTTTAA

Product: oligopeptide ABC transport system permease component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MMLSKKNSEALENFSEKLEVEGRSLWQDARRRFMHNRAAVTSLIMLVLIALFVTFAPMVSSFSYFDTDWGMMSNAPDMAS
GHYFGTDSSGRDLLVRVAIGGRISLMVGVAAALVAVILGTLYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFF
GQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQVGGVSTASIVLRHIVPNVLGVVVVYASLLVPSMILFESFL
SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPKDR

Sequences:

>Translated_302_residues
MMLSKKNSEALENFSEKLEVEGRSLWQDARRRFMHNRAAVTSLIMLVLIALFVTFAPMVSSFSYFDTDWGMMSNAPDMAS
GHYFGTDSSGRDLLVRVAIGGRISLMVGVAAALVAVILGTLYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFF
GQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQVGGVSTASIVLRHIVPNVLGVVVVYASLLVPSMILFESFL
SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPKDR
>Mature_302_residues
MMLSKKNSEALENFSEKLEVEGRSLWQDARRRFMHNRAAVTSLIMLVLIALFVTFAPMVSSFSYFDTDWGMMSNAPDMAS
GHYFGTDSSGRDLLVRVAIGGRISLMVGVAAALVAVILGTLYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFF
GQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQVGGVSTASIVLRHIVPNVLGVVVVYASLLVPSMILFESFL
SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPKDR

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=302, Percent_Identity=94.3708609271523, Blast_Score=524, Evalue=1e-150,
Organism=Escherichia coli, GI1787054, Length=281, Percent_Identity=38.7900355871886, Blast_Score=203, Evalue=1e-53,
Organism=Escherichia coli, GI1787760, Length=261, Percent_Identity=35.632183908046, Blast_Score=168, Evalue=3e-43,
Organism=Escherichia coli, GI1788505, Length=220, Percent_Identity=34.0909090909091, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI1789889, Length=226, Percent_Identity=31.858407079646, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI1789964, Length=278, Percent_Identity=32.7338129496403, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI1787549, Length=215, Percent_Identity=28.8372093023256, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33067; Mature: 33067

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLSKKNSEALENFSEKLEVEGRSLWQDARRRFMHNRAAVTSLIMLVLIALFVTFAPMVS
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFSYFDTDWGMMSNAPDMASGHYFGTDSSGRDLLVRVAIGGRISLMVGVAAALVAVILGT
HCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
LYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWLDMA
HHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
RIVRGQTLSLKRKEFIEAAQVGGVSTASIVLRHIVPNVLGVVVVYASLLVPSMILFESFL
HHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPK
HHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DR
CC
>Mature Secondary Structure
MMLSKKNSEALENFSEKLEVEGRSLWQDARRRFMHNRAAVTSLIMLVLIALFVTFAPMVS
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFSYFDTDWGMMSNAPDMASGHYFGTDSSGRDLLVRVAIGGRISLMVGVAAALVAVILGT
HCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
LYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWLDMA
HHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
RIVRGQTLSLKRKEFIEAAQVGGVSTASIVLRHIVPNVLGVVVVYASLLVPSMILFESFL
HHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPK
HHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]