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The map label for this gene is ydiK [H]

Identifier: 238895213

GI number: 238895213

Start: 3094486

End: 3095598

Strand: Direct

Name: ydiK [H]

Synonym: KP1_3260

Alternate gene names: 238895213

Gene position: 3094486-3095598 (Clockwise)

Preceding gene: 238895209

Following gene: 238895215

Centisome position: 58.96

GC content: 61.81

Gene sequence:

>1113_bases
ATGATTAATCCCCATCAGCCTCGGGACATTCCGCAAATACTGCTGTCGGTGCTGTTCCTGGCCCTGATTATCATATCCTG
CCTGTGGGTTGTGCAGCCGTTTATTCTGTCCTTCGCCTGGGCCGGTACGGTGGTGATCGCCACCTGGCCGGTGCTGCTGC
GTCTGCAGCGTGTGCTGTTCGGCAAACGACTGCTGGCGGTGCTGGCGATGACCCTGTTGCTGTTTCTGCTATTCGTTATT
CCTATCGCTCTGCTGGTCAACAGCCTGGTGGATAACAGCGTTCCGCTGATCAAACTCATCAGCAGCGGAAATGTGACGCT
GCCGGATTTCGCCTGGCTCAACAGCGTACCGCTGGTCGGCGATAAACTGTACTCCGCCTGGCACGGTCTGCTGGATATGG
GCGGCTCGGCGATTATGGCCAAGGTTCGTCCCTATATTGGCACCACCACCAGCTGGTTTGTCGGTCAGGCGGCGCACATC
GGCAAGCTGCTGGTCTACTGCGGTTTGATGCTGCTGTTCAGCGCGCTGCTCTACTGGCGCGGCGAGCAGGTGGCCTACGG
TTTCCGCTACTTCGCCACGCGCCTCGCGGCCAAACGCGGCGACGCCGCGGTGCTGCTGGCCGGCCAGGCCGTGCGCGCCG
TGGCGCTGGGCGTGGTGGTCACTGCCCTCACTCAGGCGGTACTGGGCGGGATTGGCCTTGCCGTCTCCGGCGTGCCCTAC
GCCGCTCTGCTGACCGTGGTGATGATCTTTACCTGTCTGGTTCAGCTCGGCCCTTTACTGGTTTTGGTGCCGTCGATTAT
CTGGCTTTACTGGAGCGGGGACACCACCTGGGGCACCGTGCTGCTGGTCTGGAGCTGCGTAGTCGGCACCATGGACAACG
TTATTCGTCCGGTGCTCATCCGCATGGGCGCCGACCTGCCAATGATCCTTATCCTCACCGGCGTCATTGGCGGCCTGATC
GCCTTCGGCATGATCGGCCTGTTTATCGGTCCGGTGCTGCTCGCCGTCTCCTGGCGGCTGTATGACGCCTGGGTGCATGA
GGTGCCGCCGCCGCCGAAAGACCCTGACGTCGTCCTTGAAGAGCTCAGTGAGCTGGAGGCCGGTCGCAAGTAA

Upstream 100 bases:

>100_bases
CTGTGCAAAATCAGCCCGGCAAAATTATTGATATTATTATCAGTATATGGATTTACGCGGCGCCAGCTGTTTGGCGCGAC
TGGAAAGGTAAAATTTCTCT

Downstream 100 bases:

>100_bases
TGCCTGGCAGGCGGGGAGACCCGCCTGTTTCTTTGCCCGCATATTGTTAAGAAAAATTTATTGATCGCCGGCAATGCGCT
GGCCCCGCGCGCCCTTCACC

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MINPHQPRDIPQILLSVLFLALIIISCLWVVQPFILSFAWAGTVVIATWPVLLRLQRVLFGKRLLAVLAMTLLLFLLFVI
PIALLVNSLVDNSVPLIKLISSGNVTLPDFAWLNSVPLVGDKLYSAWHGLLDMGGSAIMAKVRPYIGTTTSWFVGQAAHI
GKLLVYCGLMLLFSALLYWRGEQVAYGFRYFATRLAAKRGDAAVLLAGQAVRAVALGVVVTALTQAVLGGIGLAVSGVPY
AALLTVVMIFTCLVQLGPLLVLVPSIIWLYWSGDTTWGTVLLVWSCVVGTMDNVIRPVLIRMGADLPMILILTGVIGGLI
AFGMIGLFIGPVLLAVSWRLYDAWVHEVPPPPKDPDVVLEELSELEAGRK

Sequences:

>Translated_370_residues
MINPHQPRDIPQILLSVLFLALIIISCLWVVQPFILSFAWAGTVVIATWPVLLRLQRVLFGKRLLAVLAMTLLLFLLFVI
PIALLVNSLVDNSVPLIKLISSGNVTLPDFAWLNSVPLVGDKLYSAWHGLLDMGGSAIMAKVRPYIGTTTSWFVGQAAHI
GKLLVYCGLMLLFSALLYWRGEQVAYGFRYFATRLAAKRGDAAVLLAGQAVRAVALGVVVTALTQAVLGGIGLAVSGVPY
AALLTVVMIFTCLVQLGPLLVLVPSIIWLYWSGDTTWGTVLLVWSCVVGTMDNVIRPVLIRMGADLPMILILTGVIGGLI
AFGMIGLFIGPVLLAVSWRLYDAWVHEVPPPPKDPDVVLEELSELEAGRK
>Mature_370_residues
MINPHQPRDIPQILLSVLFLALIIISCLWVVQPFILSFAWAGTVVIATWPVLLRLQRVLFGKRLLAVLAMTLLLFLLFVI
PIALLVNSLVDNSVPLIKLISSGNVTLPDFAWLNSVPLVGDKLYSAWHGLLDMGGSAIMAKVRPYIGTTTSWFVGQAAHI
GKLLVYCGLMLLFSALLYWRGEQVAYGFRYFATRLAAKRGDAAVLLAGQAVRAVALGVVVTALTQAVLGGIGLAVSGVPY
AALLTVVMIFTCLVQLGPLLVLVPSIIWLYWSGDTTWGTVLLVWSCVVGTMDNVIRPVLIRMGADLPMILILTGVIGGLI
AFGMIGLFIGPVLLAVSWRLYDAWVHEVPPPPKDPDVVLEELSELEAGRK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=355, Percent_Identity=80.2816901408451, Blast_Score=573, Evalue=1e-165,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40099; Mature: 40099

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINPHQPRDIPQILLSVLFLALIIISCLWVVQPFILSFAWAGTVVIATWPVLLRLQRVLF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKRLLAVLAMTLLLFLLFVIPIALLVNSLVDNSVPLIKLISSGNVTLPDFAWLNSVPLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCHHHHCCCCCHH
DKLYSAWHGLLDMGGSAIMAKVRPYIGTTTSWFVGQAAHIGKLLVYCGLMLLFSALLYWR
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEQVAYGFRYFATRLAAKRGDAAVLLAGQAVRAVALGVVVTALTQAVLGGIGLAVSGVPY
CCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AALLTVVMIFTCLVQLGPLLVLVPSIIWLYWSGDTTWGTVLLVWSCVVGTMDNVIRPVLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RMGADLPMILILTGVIGGLIAFGMIGLFIGPVLLAVSWRLYDAWVHEVPPPPKDPDVVLE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
ELSELEAGRK
HHHHHHCCCC
>Mature Secondary Structure
MINPHQPRDIPQILLSVLFLALIIISCLWVVQPFILSFAWAGTVVIATWPVLLRLQRVLF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKRLLAVLAMTLLLFLLFVIPIALLVNSLVDNSVPLIKLISSGNVTLPDFAWLNSVPLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCHHHHCCCCCHH
DKLYSAWHGLLDMGGSAIMAKVRPYIGTTTSWFVGQAAHIGKLLVYCGLMLLFSALLYWR
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEQVAYGFRYFATRLAAKRGDAAVLLAGQAVRAVALGVVVTALTQAVLGGIGLAVSGVPY
CCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AALLTVVMIFTCLVQLGPLLVLVPSIIWLYWSGDTTWGTVLLVWSCVVGTMDNVIRPVLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RMGADLPMILILTGVIGGLIAFGMIGLFIGPVLLAVSWRLYDAWVHEVPPPPKDPDVVLE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
ELSELEAGRK
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]