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The map label for this gene is ycfQ [C]

Identifier: 238895194

GI number: 238895194

Start: 3073934

End: 3074566

Strand: Direct

Name: ycfQ [C]

Synonym: KP1_3240

Alternate gene names: 238895194

Gene position: 3073934-3074566 (Clockwise)

Preceding gene: 238895193

Following gene: 238895195

Centisome position: 58.57

GC content: 60.98

Gene sequence:

>633_bases
ATGAGCGAAACCCCTCGTCAGAAAGGTCGGCCAAAAGATCCGTTGAAAACGCAGGCGATACTTCAGGCCGCCCGTAAGCT
GTTTCTGGAACAGGGCCTGGAGGTGACAACGGCCGAAATCGCCCGCGTAGCCGGGGTGGCGAAAGCCACCCTGTATGCCA
ATTTCAGCGATAAAGAACATCTGATAGAGGCGGTCTTACGCCAGGAATCGGATCTCACCATCAGCGACCATGATTTCGCC
CAGCGCCATCATCTGCCGCTGATCGAGGTACTGACGGCGTTTGGTTATCGCTTTGTCCGCTTTATCAACCAGCGGGAACT
GACCGGCTGGGACCGACTGATCGCCTCGGCTGCCGTGCGTCGCCCCGATCTCCCCGGCCGCTTTTACGCCGCCGGGCCGG
GGCGCGCGCAGCAGATGCTGGAAGCGATCATCGCCGAGGCGATCGAAGCCGGTACTTTACGAGCCTGCGATCCGCAGGAG
GCTGCCGACGAACTGGCCGGTTTATGGCTGGGAATGACCAGCCTGGCGATAAAACTTGGCGCAAGACCTCCGCTGTCCGA
CGACGAAATCAAACAGCGGGTTGAGCGCGCCCTGGACGTCTTTCTGCGCGCGTATTCCCTGGCGCCGGGCTGA

Upstream 100 bases:

>100_bases
TCAGTGAACCCCGGCGCACTGAGGAATTCCATATTGCGCTTGAACACATTACCGTGGTCGGAGGATTAATTATGAGCGCG
CTGTTTGCAGGCTATCGGCG

Downstream 100 bases:

>100_bases
TCTCTCCTTCCCCTTTTCAGTGCTGTGGCCTGGCGCAAGGCTGATTTATTGTGCCCAATCCGCGCCCGGCGCAAAAAATA
ATGTCCTTACCGGTTAGCAT

Product: putative TetR-family trancriptional regulatory protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Transcription Regulator Protein; TetR-Family Trancriptional Regulatory Protein; TetR-Type Transcriptional Regulator; Bacterial Regulatory Protein; Bacterial Regulatory Protein TetR Family Protein; Transcription Regulator Protein Tetr Family; TetR Family Regulatory Protein

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSETPRQKGRPKDPLKTQAILQAARKLFLEQGLEVTTAEIARVAGVAKATLYANFSDKEHLIEAVLRQESDLTISDHDFA
QRHHLPLIEVLTAFGYRFVRFINQRELTGWDRLIASAAVRRPDLPGRFYAAGPGRAQQMLEAIIAEAIEAGTLRACDPQE
AADELAGLWLGMTSLAIKLGARPPLSDDEIKQRVERALDVFLRAYSLAPG

Sequences:

>Translated_210_residues
MSETPRQKGRPKDPLKTQAILQAARKLFLEQGLEVTTAEIARVAGVAKATLYANFSDKEHLIEAVLRQESDLTISDHDFA
QRHHLPLIEVLTAFGYRFVRFINQRELTGWDRLIASAAVRRPDLPGRFYAAGPGRAQQMLEAIIAEAIEAGTLRACDPQE
AADELAGLWLGMTSLAIKLGARPPLSDDEIKQRVERALDVFLRAYSLAPG
>Mature_209_residues
SETPRQKGRPKDPLKTQAILQAARKLFLEQGLEVTTAEIARVAGVAKATLYANFSDKEHLIEAVLRQESDLTISDHDFAQ
RHHLPLIEVLTAFGYRFVRFINQRELTGWDRLIASAAVRRPDLPGRFYAAGPGRAQQMLEAIIAEAIEAGTLRACDPQEA
ADELAGLWLGMTSLAIKLGARPPLSDDEIKQRVERALDVFLRAYSLAPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23257; Mature: 23126

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETPRQKGRPKDPLKTQAILQAARKLFLEQGLEVTTAEIARVAGVAKATLYANFSDKEH
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
LIEAVLRQESDLTISDHDFAQRHHLPLIEVLTAFGYRFVRFINQRELTGWDRLIASAAVR
HHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
RPDLPGRFYAAGPGRAQQMLEAIIAEAIEAGTLRACDPQEAADELAGLWLGMTSLAIKLG
CCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
ARPPLSDDEIKQRVERALDVFLRAYSLAPG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SETPRQKGRPKDPLKTQAILQAARKLFLEQGLEVTTAEIARVAGVAKATLYANFSDKEH
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
LIEAVLRQESDLTISDHDFAQRHHLPLIEVLTAFGYRFVRFINQRELTGWDRLIASAAVR
HHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
RPDLPGRFYAAGPGRAQQMLEAIIAEAIEAGTLRACDPQEAADELAGLWLGMTSLAIKLG
CCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
ARPPLSDDEIKQRVERALDVFLRAYSLAPG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA