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The map label for this gene is ynhG [H]

Identifier: 238895185

GI number: 238895185

Start: 3066015

End: 3067001

Strand: Reverse

Name: ynhG [H]

Synonym: KP1_3231

Alternate gene names: 238895185

Gene position: 3067001-3066015 (Counterclockwise)

Preceding gene: 238895186

Following gene: 238895182

Centisome position: 58.44

GC content: 60.69

Gene sequence:

>987_bases
ATGAAACGCAAAACGATGATCACCTTAGCCCTTCTCAGCGCCCTTGGCGCCTCCTCGGCCGCCTGGGCCGTTGATTACCC
GCTTCCTCCCGCCAACAGTCGGCTGATTGGGCAGAATCAGTACTGGACGGTCCAGGAGGGAGATCGCAACCTGCAGGCGA
TTGCGCGCCATTTCGATACCGCGGCGATGCTGATCCTCGAAGCCAACGATACGATTGCACCAGTGCAGCCGAAGCCCGGC
ACTCAGGTCCTTATCCCTTCTCAGATGCTGCTGCCCGACGTGCCGAGGGAGGGCATTGTCGTCAACCTCGCCGAACTGCG
GCTGTATTACTTCCCGCCGGGAGAGAATCAGGTGCAGGTCTATCCGCTGGGCATTGGCCAGTTAGGTCTGGAAACGCCGG
AGATGACCACCCGCGTGGGGCAGAAGATCCCTAACCCTACCTGGACGCCTACCGCCGGCATCCGCGCGCGCTCGCTGGAG
AAAGGGGTGACGCTGCCAGCGGTGGTCCCGGCCGGACCGAACAATCCCCTGGGGCGCTATGCGCTGCGTCTGGCCTACGG
TAACGGTGAATATCTCATCCACGGAACTAACGCCCCAGACAGCGTTGGTCTGCGCGTCAGCTCGGGCTGTATGCGGATGA
ACGCTGATGACATCAAAGCGCTGTTCAGCCAGGTGAAAACCGGGACGCCGGTACGGATTATCAATCAGCCGGTGAAGTTT
GCCGTCGAGCCGGATGGTAAACGCTATGTCGAAGTCCACAGGCCGCTTTCGCAGACCGAAGGGGAAAACACCCGGACCAT
CGCTTACACGCTGCCAGCGGCGTTTCACGCCTTCGCAGAGGATAAAGCAGTGGATGACCTGCAGTTGAAAAAAGCGATGT
CGAGAAGGGCGGGGTATCCGGTGGTGGTGTCGGCGGGGGCAGGTAGCACGGCGACGTCGCTGTCGGCGCAGAATAGTTCG
TCTGACAACGGTCTGCTTACCCAATAG

Upstream 100 bases:

>100_bases
GAATAAACAGGTAGATTTCATTCTGTTACGTCCGGCAGGGCGCTGACCCTGCCGCCGTTCAGTCTCCTGGCGTTTTATCA
GCGAAAGAAGGAATCTCAGT

Downstream 100 bases:

>100_bases
CCCTCATGCTGAGGGCAAAAAAAATGGCGCACAAAGTGCGCCATTTTTATTACCAGAACTCTTACTTACGGTAAGAGTGA
GCCTGGTTGTCCAGACGCTG

Product: putative ATP synthase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKRKTMITLALLSALGASSAAWAVDYPLPPANSRLIGQNQYWTVQEGDRNLQAIARHFDTAAMLILEANDTIAPVQPKPG
TQVLIPSQMLLPDVPREGIVVNLAELRLYYFPPGENQVQVYPLGIGQLGLETPEMTTRVGQKIPNPTWTPTAGIRARSLE
KGVTLPAVVPAGPNNPLGRYALRLAYGNGEYLIHGTNAPDSVGLRVSSGCMRMNADDIKALFSQVKTGTPVRIINQPVKF
AVEPDGKRYVEVHRPLSQTEGENTRTIAYTLPAAFHAFAEDKAVDDLQLKKAMSRRAGYPVVVSAGAGSTATSLSAQNSS
SDNGLLTQ

Sequences:

>Translated_328_residues
MKRKTMITLALLSALGASSAAWAVDYPLPPANSRLIGQNQYWTVQEGDRNLQAIARHFDTAAMLILEANDTIAPVQPKPG
TQVLIPSQMLLPDVPREGIVVNLAELRLYYFPPGENQVQVYPLGIGQLGLETPEMTTRVGQKIPNPTWTPTAGIRARSLE
KGVTLPAVVPAGPNNPLGRYALRLAYGNGEYLIHGTNAPDSVGLRVSSGCMRMNADDIKALFSQVKTGTPVRIINQPVKF
AVEPDGKRYVEVHRPLSQTEGENTRTIAYTLPAAFHAFAEDKAVDDLQLKKAMSRRAGYPVVVSAGAGSTATSLSAQNSS
SDNGLLTQ
>Mature_328_residues
MKRKTMITLALLSALGASSAAWAVDYPLPPANSRLIGQNQYWTVQEGDRNLQAIARHFDTAAMLILEANDTIAPVQPKPG
TQVLIPSQMLLPDVPREGIVVNLAELRLYYFPPGENQVQVYPLGIGQLGLETPEMTTRVGQKIPNPTWTPTAGIRARSLE
KGVTLPAVVPAGPNNPLGRYALRLAYGNGEYLIHGTNAPDSVGLRVSSGCMRMNADDIKALFSQVKTGTPVRIINQPVKF
AVEPDGKRYVEVHRPLSQTEGENTRTIAYTLPAAFHAFAEDKAVDDLQLKKAMSRRAGYPVVVSAGAGSTATSLSAQNSS
SDNGLLTQ

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=328, Percent_Identity=72.5609756097561, Blast_Score=489, Evalue=1e-140,
Organism=Escherichia coli, GI1787356, Length=280, Percent_Identity=51.7857142857143, Blast_Score=294, Evalue=7e-81,
Organism=Escherichia coli, GI1787040, Length=305, Percent_Identity=47.8688524590164, Blast_Score=258, Evalue=5e-70,
Organism=Escherichia coli, GI1788299, Length=313, Percent_Identity=46.3258785942492, Blast_Score=257, Evalue=8e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 35324; Mature: 35324

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKTMITLALLSALGASSAAWAVDYPLPPANSRLIGQNQYWTVQEGDRNLQAIARHFDT
CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEECCCCEEEEECCCCHHHHHHHHCCC
AAMLILEANDTIAPVQPKPGTQVLIPSQMLLPDVPREGIVVNLAELRLYYFPPGENQVQV
EEEEEEECCCCEECCCCCCCCEEEECCHHHCCCCCCCCEEEEEEHEEEEEECCCCCEEEE
YPLGIGQLGLETPEMTTRVGQKIPNPTWTPTAGIRARSLEKGVTLPAVVPAGPNNPLGRY
EEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCE
ALRLAYGNGEYLIHGTNAPDSVGLRVSSGCMRMNADDIKALFSQVKTGTPVRIINQPVKF
EEEEEECCCCEEEECCCCCCCCCEEEECCEEECCHHHHHHHHHHHCCCCCEEEECCCEEE
AVEPDGKRYVEVHRPLSQTEGENTRTIAYTLPAAFHAFAEDKAVDDLQLKKAMSRRAGYP
EECCCCCEEEEEECCHHHCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHCCCC
VVVSAGAGSTATSLSAQNSSSDNGLLTQ
EEEECCCCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKRKTMITLALLSALGASSAAWAVDYPLPPANSRLIGQNQYWTVQEGDRNLQAIARHFDT
CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEECCCCEEEEECCCCHHHHHHHHCCC
AAMLILEANDTIAPVQPKPGTQVLIPSQMLLPDVPREGIVVNLAELRLYYFPPGENQVQV
EEEEEEECCCCEECCCCCCCCEEEECCHHHCCCCCCCCEEEEEEHEEEEEECCCCCEEEE
YPLGIGQLGLETPEMTTRVGQKIPNPTWTPTAGIRARSLEKGVTLPAVVPAGPNNPLGRY
EEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCE
ALRLAYGNGEYLIHGTNAPDSVGLRVSSGCMRMNADDIKALFSQVKTGTPVRIINQPVKF
EEEEEECCCCEEEECCCCCCCCCEEEECCEEECCHHHHHHHHHHHCCCCCEEEECCCEEE
AVEPDGKRYVEVHRPLSQTEGENTRTIAYTLPAAFHAFAEDKAVDDLQLKKAMSRRAGYP
EECCCCCEEEEEECCHHHCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHCCCC
VVVSAGAGSTATSLSAQNSSSDNGLLTQ
EEEECCCCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]