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The map label for this gene is ssuC [H]

Identifier: 238895155

GI number: 238895155

Start: 3036808

End: 3037563

Strand: Reverse

Name: ssuC [H]

Synonym: KP1_3199

Alternate gene names: 238895155

Gene position: 3037563-3036808 (Counterclockwise)

Preceding gene: 238895156

Following gene: 238895154

Centisome position: 57.87

GC content: 63.62

Gene sequence:

>756_bases
GTGCTGCATGCCGGCAAGTGGCTGGCGCTGCTGCCGGTGCTGTTTGCTGTCTGGGAAGGGCTGACCGCCAAAACTGCCGT
GTTGCCGGTACCATTCTTCGCGCCGCCGCAGGCGCTGATCGAGGTGCTGCACGACGACTGGCCGCGCCTGCTCGACAGCC
TGCTGCACTCCCTGGGGCTGCTGGGGCTCGGTGTGCTGCTGGGTACCAGCAGCGGTTTCATCACCGGTCTGGCCATCGGC
TGGTCGCAACGGATTGGCTACTGGGTGCATCCGGTGTTACGTCTGCTGGGGCCGGTGCCGTCCACCGCGCTGCTGCCGCT
GTGCCTGTTTATTTTTCCCTCGAGCTTCGGCGCCAGCGTGTTTTTGATCGCGCTGAGCACCTGGTTCCCGGTCACGGTGC
TGACCTGGTCCGGAGTGATGGGCATTGATAAGGCGTGGTACGACGTGGCGCGGACCCTCGGCGCCAGCCAGCGTTTCCTG
ATCCTGCGGGTGGCGATCCCCGCCGCGTTGCCGAACGTCTTTGTCGGCCTGTTTATGGGGCTCGGCGCGTCGTTTTCGGT
GTTGATTGTCGCCGAAATGGTCGGGGTGAAGTCGGGGATCGGCTTTTACCTCCAGTGGGCCCAGGGCTGGGCGGCCTATC
CGAATATGTATGCCGCGCTGCTGGTGATGGCCTTGTTATGCTCCGGCCTGATAAGCGGATTATTTATGCTGCGTGACCGG
CTGCTGAGCTGGCAGCGAGGAGGGATGCAATGGTAA

Upstream 100 bases:

>100_bases
GGCGCTGGCCGTTTAGCGAAGGCTGGGCGCTGGCGCAATTCACCCTCGGCGGCGGCTTGCTGCTGCTGGCGCTGAGCTAT
CGCTACTGGCGGGCGCGCGT

Downstream 100 bases:

>100_bases
CCGAGACGATAGCGCGCGGCGCGGCGGTATCCATCAGCCATCTTCATCATGCGTTTACGCTTGGCAAACAGACGGTACCG
GTGCTGGAGAATATTAGCCT

Product: putative ABC-type transport system permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MLHAGKWLALLPVLFAVWEGLTAKTAVLPVPFFAPPQALIEVLHDDWPRLLDSLLHSLGLLGLGVLLGTSSGFITGLAIG
WSQRIGYWVHPVLRLLGPVPSTALLPLCLFIFPSSFGASVFLIALSTWFPVTVLTWSGVMGIDKAWYDVARTLGASQRFL
ILRVAIPAALPNVFVGLFMGLGASFSVLIVAEMVGVKSGIGFYLQWAQGWAAYPNMYAALLVMALLCSGLISGLFMLRDR
LLSWQRGGMQW

Sequences:

>Translated_251_residues
MLHAGKWLALLPVLFAVWEGLTAKTAVLPVPFFAPPQALIEVLHDDWPRLLDSLLHSLGLLGLGVLLGTSSGFITGLAIG
WSQRIGYWVHPVLRLLGPVPSTALLPLCLFIFPSSFGASVFLIALSTWFPVTVLTWSGVMGIDKAWYDVARTLGASQRFL
ILRVAIPAALPNVFVGLFMGLGASFSVLIVAEMVGVKSGIGFYLQWAQGWAAYPNMYAALLVMALLCSGLISGLFMLRDR
LLSWQRGGMQW
>Mature_251_residues
MLHAGKWLALLPVLFAVWEGLTAKTAVLPVPFFAPPQALIEVLHDDWPRLLDSLLHSLGLLGLGVLLGTSSGFITGLAIG
WSQRIGYWVHPVLRLLGPVPSTALLPLCLFIFPSSFGASVFLIALSTWFPVTVLTWSGVMGIDKAWYDVARTLGASQRFL
ILRVAIPAALPNVFVGLFMGLGASFSVLIVAEMVGVKSGIGFYLQWAQGWAAYPNMYAALLVMALLCSGLISGLFMLRDR
LLSWQRGGMQW

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=146, Percent_Identity=34.9315068493151, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786564, Length=243, Percent_Identity=32.0987654320988, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27254; Mature: 27254

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCC
>Mature Secondary Structure
MLHAGKWLALLPVLFAVWEGLTAKTAVLPVPFFAPPQALIEVLHDDWPRLLDSLLHSLGL
CCCCCHHHHHHHHHHHHHCCCCCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LGLGVLLGTSSGFITGLAIGWSQRIGYWVHPVLRLLGPVPSTALLPLCLFIFPSSFGASV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHH
FLIALSTWFPVTVLTWSGVMGIDKAWYDVARTLGASQRFLILRVAIPAALPNVFVGLFMG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LGASFSVLIVAEMVGVKSGIGFYLQWAQGWAAYPNMYAALLVMALLCSGLISGLFMLRDR
CCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSWQRGGMQW
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]