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The map label for this gene is ycaD [C]

Identifier: 238895140

GI number: 238895140

Start: 3021090

End: 3022289

Strand: Direct

Name: ycaD [C]

Synonym: KP1_3180

Alternate gene names: 238895140

Gene position: 3021090-3022289 (Clockwise)

Preceding gene: 238895138

Following gene: 238895141

Centisome position: 57.56

GC content: 64.08

Gene sequence:

>1200_bases
ATGTTTAACCCAGACCAGAATCGTCTTGCCCCCACGCTGGCGATGATCATGGCCGCGTCGCTTGTGGGATTTATCACCGG
CTATACGGTGCCGTTAATCAGTCTTGAGCTGGCGCAGCAGCAGATCGCGCCGCTGTACGTCGGCCTGCTGGCCGCCCTGC
CGCCCGCCGGCATGATGATCTCCTCTTTCCTCTCTCCTGCGCTGTGCCGGCGCGTTGAAATGGGCGTGCTGCTGAGCGGC
AGTCTGATCCTGCTGGCGCTGGCGACCATCGCCTCATGCATGACTACCGATATGACGCTGCTTTTGCTGCCGCGCCTGCT
GACCGGCCTGGCCTCCGGGGTCATTATCGTACTCGGCGAAAGCTGGATCACCGGCGGCGCGGCGGGCAGCCAGCGCGCTA
CCCTCACCGGTCTCTACGCCTCGGCCTTTACCGGCTGCCAGCTGGCCGGGCCGCTGCTGATCTCCGTCGGCCCAGCCTGG
CAGACCTCAGCGCTGATAGCGATTGTCGCGGTCACCGCCGTCTGCCTGCTGATGCTGCGCCATCTGCCCACCGGCACTCG
TGAAAGCCTCGGGGAGCGCGCCAGCTGGCGCAGCCTCGGCGCCTTTCTGCCGGTACTGGCCTCCGGGGTCTTCTGCTTCG
CCTTCTTTGACGCCAGCATCCTCGCCCTGCTGCCGCTGTACGGCATGGACAAAGGGCTGAATGAAGGGCTGGCGGTGCTG
CTGGTCACCATGGTGCTTACCGGAGATGCGATGTTCCAGACCCCGCTCGGCTGGCTGGCCGACCGGGTCGGGATTCGCCG
CGTGCATCTGAGCTGCGCGGTGGTTTTCAGCCTGTCGCTGCTGGCCCTGCCGCTGATGCTCGGCTCGCGCATTCAGCTGA
TGGCCATTTGTCTGCTGCTGGGCGCCGCGGCGGGCGCACTTTATACCCTGTCGCTGGTGCGGGCGGGGAAAACCTTCAAT
GGGCAGAAGCTGATTATGATTAACGCCCTGTTCGGCTTTTTCTGGTCCGCCGGCAGCGTTGCCGGGCCGGTAGTCAGCGG
CATGCTGATCGGCATCACCGGTTACGATGGCCTGATCGTCACCCTGGTGGCCAGCGGCGTACTGTTCCTGTTGATTCAGT
GTCTGTGCAAAAACGAGAAAACCCTGCTTGCCAGTGAGCAGGAAGATGACATGGACGAGGCGACGGAGTCCGCACGGTAG

Upstream 100 bases:

>100_bases
ATTTCAACGGTGACAACGGCCAGTCGATTAATTATTATGCAACTCAGGACGGCAATTTGCCGAAGGATCCACTACTGACC
TCTCCGTCATCGGAAATAAA

Downstream 100 bases:

>100_bases
TCCTCACGGGCTGGCCTGGCGCCAGCCCTTTTTTATGGCCCTCACCGGAGGGTATCCTGTTCTTGCTGGCTCACTGCTGT
TAACCATTGCCGGCCCCCCA

Product: putative transporter protein

Products: NA

Alternate protein names: Facilitator Family Transporter; MFS Permease; Facilitator Superfamily Protein; Transmembrane Protein; Facilitator Superfamily Transporter; Cyanate Permease; Facilitator Family Transporter Protein; ABC Transporter Permease Protein; MFS Transporter; Transporter-Like Membrane Protein; Multidrug Resistance Protein; MFS Family Transporter

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MFNPDQNRLAPTLAMIMAASLVGFITGYTVPLISLELAQQQIAPLYVGLLAALPPAGMMISSFLSPALCRRVEMGVLLSG
SLILLALATIASCMTTDMTLLLLPRLLTGLASGVIIVLGESWITGGAAGSQRATLTGLYASAFTGCQLAGPLLISVGPAW
QTSALIAIVAVTAVCLLMLRHLPTGTRESLGERASWRSLGAFLPVLASGVFCFAFFDASILALLPLYGMDKGLNEGLAVL
LVTMVLTGDAMFQTPLGWLADRVGIRRVHLSCAVVFSLSLLALPLMLGSRIQLMAICLLLGAAAGALYTLSLVRAGKTFN
GQKLIMINALFGFFWSAGSVAGPVVSGMLIGITGYDGLIVTLVASGVLFLLIQCLCKNEKTLLASEQEDDMDEATESAR

Sequences:

>Translated_399_residues
MFNPDQNRLAPTLAMIMAASLVGFITGYTVPLISLELAQQQIAPLYVGLLAALPPAGMMISSFLSPALCRRVEMGVLLSG
SLILLALATIASCMTTDMTLLLLPRLLTGLASGVIIVLGESWITGGAAGSQRATLTGLYASAFTGCQLAGPLLISVGPAW
QTSALIAIVAVTAVCLLMLRHLPTGTRESLGERASWRSLGAFLPVLASGVFCFAFFDASILALLPLYGMDKGLNEGLAVL
LVTMVLTGDAMFQTPLGWLADRVGIRRVHLSCAVVFSLSLLALPLMLGSRIQLMAICLLLGAAAGALYTLSLVRAGKTFN
GQKLIMINALFGFFWSAGSVAGPVVSGMLIGITGYDGLIVTLVASGVLFLLIQCLCKNEKTLLASEQEDDMDEATESAR
>Mature_399_residues
MFNPDQNRLAPTLAMIMAASLVGFITGYTVPLISLELAQQQIAPLYVGLLAALPPAGMMISSFLSPALCRRVEMGVLLSG
SLILLALATIASCMTTDMTLLLLPRLLTGLASGVIIVLGESWITGGAAGSQRATLTGLYASAFTGCQLAGPLLISVGPAW
QTSALIAIVAVTAVCLLMLRHLPTGTRESLGERASWRSLGAFLPVLASGVFCFAFFDASILALLPLYGMDKGLNEGLAVL
LVTMVLTGDAMFQTPLGWLADRVGIRRVHLSCAVVFSLSLLALPLMLGSRIQLMAICLLLGAAAGALYTLSLVRAGKTFN
GQKLIMINALFGFFWSAGSVAGPVVSGMLIGITGYDGLIVTLVASGVLFLLIQCLCKNEKTLLASEQEDDMDEATESAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41775; Mature: 41775

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNPDQNRLAPTLAMIMAASLVGFITGYTVPLISLELAQQQIAPLYVGLLAALPPAGMMI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
SSFLSPALCRRVEMGVLLSGSLILLALATIASCMTTDMTLLLLPRLLTGLASGVIIVLGE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
SWITGGAAGSQRATLTGLYASAFTGCQLAGPLLISVGPAWQTSALIAIVAVTAVCLLMLR
CCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
HLPTGTRESLGERASWRSLGAFLPVLASGVFCFAFFDASILALLPLYGMDKGLNEGLAVL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LVTMVLTGDAMFQTPLGWLADRVGIRRVHLSCAVVFSLSLLALPLMLGSRIQLMAICLLL
HHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GAAAGALYTLSLVRAGKTFNGQKLIMINALFGFFWSAGSVAGPVVSGMLIGITGYDGLIV
HHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHCEEEEEECCCHHHH
TLVASGVLFLLIQCLCKNEKTLLASEQEDDMDEATESAR
HHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHCCC
>Mature Secondary Structure
MFNPDQNRLAPTLAMIMAASLVGFITGYTVPLISLELAQQQIAPLYVGLLAALPPAGMMI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
SSFLSPALCRRVEMGVLLSGSLILLALATIASCMTTDMTLLLLPRLLTGLASGVIIVLGE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
SWITGGAAGSQRATLTGLYASAFTGCQLAGPLLISVGPAWQTSALIAIVAVTAVCLLMLR
CCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
HLPTGTRESLGERASWRSLGAFLPVLASGVFCFAFFDASILALLPLYGMDKGLNEGLAVL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LVTMVLTGDAMFQTPLGWLADRVGIRRVHLSCAVVFSLSLLALPLMLGSRIQLMAICLLL
HHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GAAAGALYTLSLVRAGKTFNGQKLIMINALFGFFWSAGSVAGPVVSGMLIGITGYDGLIV
HHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHCEEEEEECCCHHHH
TLVASGVLFLLIQCLCKNEKTLLASEQEDDMDEATESAR
HHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA