Click here to switch to the map view.

The map label for this gene is yhhZ [H]

Identifier: 238895123

GI number: 238895123

Start: 2999880

End: 3000995

Strand: Reverse

Name: yhhZ [H]

Synonym: KP1_3163

Alternate gene names: 238895123

Gene position: 3000995-2999880 (Counterclockwise)

Preceding gene: 238895124

Following gene: 238895122

Centisome position: 57.18

GC content: 45.97

Gene sequence:

>1116_bases
ATGTTTCGACTTTACCAGTCACATGATTTAATACGCCAATTAAATCCTGAAGACTTTCAATATATTTTGACACCAGCAGG
TTCGCTAAGAGAAGCGTGTATAAATTACGACCTCTCCTGTGAGGCGAATGGTCACAGCCTCGCTTTTGGCTTACCGAAGG
AAATATACAACTCATCTCCACATAAAAGGCCATATGAACGAAGGCAACGTAGCTATGCAGATCCTATCTATGATGAGGTA
GAGCACAGGTTACAAATTGGCTGGCTTGTTGGTGTGGATATCTCCAGGTGTTGGAGCAGTGACAGAAATCCATTTTACAT
CGACGACAATGGCGATTTAATTTTTACCCCTACCTCTTCGTCATACCATGCGTGGTTTAAGGACGAAATTATGAACGCCT
ACAGGCACACGATTGCCGATCGCCAAGGAAGGAGGCCAGCTCCCACTCAGCGTATACAACACAATTATAATGGCTCAAGA
ATCGCACCAGCGTCAAAGACACTAAACAGTAAGACCATTGGCCGACTGCTAGCCGCTGGCGGTATATATAATGGCAACCT
TGAAGGATTCCATGAAACAGCGTTGCAACTGGGTGGGGATGCGTCTGCAGGTTACGACCAGATTATGGGCAATAAAGGAT
TACTCATTGCAGGAGCCTCTTTCGCTGCAGGATTAACAATGGGTAGATTGAATCCTTTAAGTGAGTTAGATGAGTTATCG
AGTCTCAGTAAAATACCAGCCTTCGAAAGCCCGTATGTGAAGGGCTTCATCTCTGAGAACGGTACGTTAGTGAATGCTGA
ATACGCCGTTATCGATCCGAAAAAACTCGCGACGTACGCTTTAGATTCAACACATCCTACAGGCGGTCATAAGGCTCGGG
TGTTTGAGTCTGCCCTGGGGTACAACCCAACGAATGCGGATGTCTTAGCAGCACGAATTCAGAAGGGCGTATTATCGGCC
CCGGCAACGATTTTGCAGACAAACAACTACGGTCAAACAATGGCTGTAGATATGCCAATTTTAGGCATCAATGGTGAAAC
GGCGGTCATCCGTACAGGCTGGATGTATGAAACAGATGCGCTCGTTCCTCGCCTGACAACTATTTACGTTAAATAG

Upstream 100 bases:

>100_bases
CGTTTGGGAGAGGTAGGAATATTTTATTGCGAAAGAGAAGGGAACTGTTTAAAGCAATAACGGCGAATGATTCTTATAAA
ATGAAGGATAGGGAATTCAT

Downstream 100 bases:

>100_bases
GGAAATAAACATGAAAAGTGCCGAATTAGACGTTGTGGTTTTAAGTGAGGATTTGCCGAATGAAGGGCTGGTAAAAGGAA
CGCTTGGTACTATTGTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MFRLYQSHDLIRQLNPEDFQYILTPAGSLREACINYDLSCEANGHSLAFGLPKEIYNSSPHKRPYERRQRSYADPIYDEV
EHRLQIGWLVGVDISRCWSSDRNPFYIDDNGDLIFTPTSSSYHAWFKDEIMNAYRHTIADRQGRRPAPTQRIQHNYNGSR
IAPASKTLNSKTIGRLLAAGGIYNGNLEGFHETALQLGGDASAGYDQIMGNKGLLIAGASFAAGLTMGRLNPLSELDELS
SLSKIPAFESPYVKGFISENGTLVNAEYAVIDPKKLATYALDSTHPTGGHKARVFESALGYNPTNADVLAARIQKGVLSA
PATILQTNNYGQTMAVDMPILGINGETAVIRTGWMYETDALVPRLTTIYVK

Sequences:

>Translated_371_residues
MFRLYQSHDLIRQLNPEDFQYILTPAGSLREACINYDLSCEANGHSLAFGLPKEIYNSSPHKRPYERRQRSYADPIYDEV
EHRLQIGWLVGVDISRCWSSDRNPFYIDDNGDLIFTPTSSSYHAWFKDEIMNAYRHTIADRQGRRPAPTQRIQHNYNGSR
IAPASKTLNSKTIGRLLAAGGIYNGNLEGFHETALQLGGDASAGYDQIMGNKGLLIAGASFAAGLTMGRLNPLSELDELS
SLSKIPAFESPYVKGFISENGTLVNAEYAVIDPKKLATYALDSTHPTGGHKARVFESALGYNPTNADVLAARIQKGVLSA
PATILQTNNYGQTMAVDMPILGINGETAVIRTGWMYETDALVPRLTTIYVK
>Mature_371_residues
MFRLYQSHDLIRQLNPEDFQYILTPAGSLREACINYDLSCEANGHSLAFGLPKEIYNSSPHKRPYERRQRSYADPIYDEV
EHRLQIGWLVGVDISRCWSSDRNPFYIDDNGDLIFTPTSSSYHAWFKDEIMNAYRHTIADRQGRRPAPTQRIQHNYNGSR
IAPASKTLNSKTIGRLLAAGGIYNGNLEGFHETALQLGGDASAGYDQIMGNKGLLIAGASFAAGLTMGRLNPLSELDELS
SLSKIPAFESPYVKGFISENGTLVNAEYAVIDPKKLATYALDSTHPTGGHKARVFESALGYNPTNADVLAARIQKGVLSA
PATILQTNNYGQTMAVDMPILGINGETAVIRTGWMYETDALVPRLTTIYVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

Organism=Escherichia coli, GI1789850, Length=57, Percent_Identity=70.1754385964912, Blast_Score=79, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 41001; Mature: 41001

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLYQSHDLIRQLNPEDFQYILTPAGSLREACINYDLSCEANGHSLAFGLPKEIYNSSP
CCEECCCHHHHHHCCCCCEEEEECCCCHHHHHHHCCCEEECCCCCEEEECCCHHHHCCCC
HKRPYERRQRSYADPIYDEVEHRLQIGWLVGVDISRCWSSDRNPFYIDDNGDLIFTPTSS
CCCHHHHHHHHCCCHHHHHHHHHEEEEEEEECCHHHHHCCCCCCEEEECCCCEEEECCCC
SYHAWFKDEIMNAYRHTIADRQGRRPAPTQRIQHNYNGSRIAPASKTLNSKTIGRLLAAG
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCEECCHHHHCCHHHHHHHHHHC
GIYNGNLEGFHETALQLGGDASAGYDQIMGNKGLLIAGASFAAGLTMGRLNPLSELDELS
CCCCCCCCHHHHHHHHCCCCCCCCHHHHHCCCCEEEECCHHHHHHHHCCCCCHHHHHHHH
SLSKIPAFESPYVKGFISENGTLVNAEYAVIDPKKLATYALDSTHPTGGHKARVFESALG
HHHHCCCCCCCCEEEEECCCCEEEEEEEEEECHHHHHEEEECCCCCCCCCHHHHHHHHHC
YNPTNADVLAARIQKGVLSAPATILQTNNYGQTMAVDMPILGINGETAVIRTGWMYETDA
CCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECEEEECCCCEEEEEECCEEECCC
LVPRLTTIYVK
CCCCEEEEEEC
>Mature Secondary Structure
MFRLYQSHDLIRQLNPEDFQYILTPAGSLREACINYDLSCEANGHSLAFGLPKEIYNSSP
CCEECCCHHHHHHCCCCCEEEEECCCCHHHHHHHCCCEEECCCCCEEEECCCHHHHCCCC
HKRPYERRQRSYADPIYDEVEHRLQIGWLVGVDISRCWSSDRNPFYIDDNGDLIFTPTSS
CCCHHHHHHHHCCCHHHHHHHHHEEEEEEEECCHHHHHCCCCCCEEEECCCCEEEECCCC
SYHAWFKDEIMNAYRHTIADRQGRRPAPTQRIQHNYNGSRIAPASKTLNSKTIGRLLAAG
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCEECCHHHHCCHHHHHHHHHHC
GIYNGNLEGFHETALQLGGDASAGYDQIMGNKGLLIAGASFAAGLTMGRLNPLSELDELS
CCCCCCCCHHHHHHHHCCCCCCCCHHHHHCCCCEEEECCHHHHHHHHCCCCCHHHHHHHH
SLSKIPAFESPYVKGFISENGTLVNAEYAVIDPKKLATYALDSTHPTGGHKARVFESALG
HHHHCCCCCCCCEEEEECCCCEEEEEEEEEECHHHHHEEEECCCCCCCCCHHHHHHHHHC
YNPTNADVLAARIQKGVLSAPATILQTNNYGQTMAVDMPILGINGETAVIRTGWMYETDA
CCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECEEEECCCCEEEEEECCEEECCC
LVPRLTTIYVK
CCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]