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The map label for this gene is ccmC [H]

Identifier: 238895115

GI number: 238895115

Start: 2992209

End: 2992946

Strand: Reverse

Name: ccmC [H]

Synonym: KP1_3154

Alternate gene names: 238895115

Gene position: 2992946-2992209 (Counterclockwise)

Preceding gene: 238895116

Following gene: 238895114

Centisome position: 57.02

GC content: 65.58

Gene sequence:

>738_bases
ATGTGGAAAGCGTTACATCAACTGGCGATCCCCGAGCGGCTGTACCGCCTGTGCGGATGCTGGATCCCCTGGCTGGCGGC
GTTGAGCGCGCTGTTGCTGGTCATCGGCCTGGGGTGGGGCTTTGGCTTCGCCCCCGCGGACTATCAGCAGGGGGAAAGCT
ACCGGATCATGTACCTTCACGTCCCGGCGGCGATGTGGTCGATGGGGCTGTACCTGGCGATGGCCGTCGCGGCCTTCGTC
GGGGTGGTCTGGCAGATCAAAATGGCCGATCTGGCGATCGCCGCCCTGGCGCCGGTGGGGGCGGTCTGCACCCTGGTGGC
GCTGGTCAGCGGCGCGGCATGGGGCAAGCCGATGTGGGGGACCTGGTGGATCTGGGACGCCCGTCTGACCTCAGAGCTGG
TGCTGCTGTTTCTGTATGCCGGGGTCATCGCCCTGTGGCACGCCTTTGACGACCGGCGGCTGGCCGGGCGCGCGGCGGGG
ATCCTCGTGCTGGTCGGGGTGGTCAATCTGCCCATCATTCATTACTCGGTCTACTGGTGGAACACCCTGCACCAGGGCTC
GACCAACCTGCAGCAAACCATCGACCCAAGCATGCGTCTGCCGCTGCGGATCTGCATCTTTGCCTTCCTCACGCTGTCGG
TCACCCTGACCCTGATGCGCCTGCGTAACCTGATCCTGCAACTGGAGCGCCGTCGACCGTGGGTGGTGGCGCTGGTGAAT
AAAGGAGCCGCCCGATGA

Upstream 100 bases:

>100_bases
ACCCTGTGTCCGTTCGCCACCGCCGCTGCGCTGCGGCTGACCGTGCGATAACTCGCTGCGCCTGCGGGCGCGGCCATCAT
AACCGTGTGAGTAAGCGTCT

Downstream 100 bases:

>100_bases
GCCCCGCCTTTTCGTCTTTCGCCGCCTTCCTGAATATGGGCGGCTATGCCCTGTACGTCTGGCTGGCGGTGGCCGTGACC
GTCGCCGCATTTGGCCTGCT

Product: heme exporter protein C

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MWKALHQLAIPERLYRLCGCWIPWLAALSALLLVIGLGWGFGFAPADYQQGESYRIMYLHVPAAMWSMGLYLAMAVAAFV
GVVWQIKMADLAIAALAPVGAVCTLVALVSGAAWGKPMWGTWWIWDARLTSELVLLFLYAGVIALWHAFDDRRLAGRAAG
ILVLVGVVNLPIIHYSVYWWNTLHQGSTNLQQTIDPSMRLPLRICIFAFLTLSVTLTLMRLRNLILQLERRRPWVVALVN
KGAAR

Sequences:

>Translated_245_residues
MWKALHQLAIPERLYRLCGCWIPWLAALSALLLVIGLGWGFGFAPADYQQGESYRIMYLHVPAAMWSMGLYLAMAVAAFV
GVVWQIKMADLAIAALAPVGAVCTLVALVSGAAWGKPMWGTWWIWDARLTSELVLLFLYAGVIALWHAFDDRRLAGRAAG
ILVLVGVVNLPIIHYSVYWWNTLHQGSTNLQQTIDPSMRLPLRICIFAFLTLSVTLTLMRLRNLILQLERRRPWVVALVN
KGAAR
>Mature_245_residues
MWKALHQLAIPERLYRLCGCWIPWLAALSALLLVIGLGWGFGFAPADYQQGESYRIMYLHVPAAMWSMGLYLAMAVAAFV
GVVWQIKMADLAIAALAPVGAVCTLVALVSGAAWGKPMWGTWWIWDARLTSELVLLFLYAGVIALWHAFDDRRLAGRAAG
ILVLVGVVNLPIIHYSVYWWNTLHQGSTNLQQTIDPSMRLPLRICIFAFLTLSVTLTLMRLRNLILQLERRRPWVVALVN
KGAAR

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=241, Percent_Identity=77.1784232365145, Blast_Score=387, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 27427; Mature: 27427

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKALHQLAIPERLYRLCGCWIPWLAALSALLLVIGLGWGFGFAPADYQQGESYRIMYLH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEE
VPAAMWSMGLYLAMAVAAFVGVVWQIKMADLAIAALAPVGAVCTLVALVSGAAWGKPMWG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TWWIWDARLTSELVLLFLYAGVIALWHAFDDRRLAGRAAGILVLVGVVNLPIIHYSVYWW
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHEEEEHHH
NTLHQGSTNLQQTIDPSMRLPLRICIFAFLTLSVTLTLMRLRNLILQLERRRPWVVALVN
HHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
KGAAR
CCCCC
>Mature Secondary Structure
MWKALHQLAIPERLYRLCGCWIPWLAALSALLLVIGLGWGFGFAPADYQQGESYRIMYLH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEE
VPAAMWSMGLYLAMAVAAFVGVVWQIKMADLAIAALAPVGAVCTLVALVSGAAWGKPMWG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TWWIWDARLTSELVLLFLYAGVIALWHAFDDRRLAGRAAGILVLVGVVNLPIIHYSVYWW
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHEEEEHHH
NTLHQGSTNLQQTIDPSMRLPLRICIFAFLTLSVTLTLMRLRNLILQLERRRPWVVALVN
HHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
KGAAR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]