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The map label for this gene is ydhP [H]

Identifier: 238895039

GI number: 238895039

Start: 2922598

End: 2923764

Strand: Reverse

Name: ydhP [H]

Synonym: KP1_3069

Alternate gene names: 238895039

Gene position: 2923764-2922598 (Counterclockwise)

Preceding gene: 238895041

Following gene: 238895037

Centisome position: 55.71

GC content: 61.27

Gene sequence:

>1167_bases
ATGAAAATCAACTTTCCTTTACTTGCGCTGGCGATCGGCGCCTTTGGCATCGGTACCACCGAGTTCTCCCCGATGGGATT
GCTGCCGGTGATTGCGAAAGGTGTGGACGTCTCGATACCGGTAGCGGGAATGCTGATCAGTGCGTATGCCATCGGCGTCA
TGGTCGGCGCACCGCTGATGACGCTGCTGTTGTCGCATCGCGCACGGCGCAATGCGCTGATTTTTCTGATGGGGATCTTC
ACCGTCGGCAACCTGTTGTCATCCATCGCGCCGGATTACACCACGCTGCTGCTGTCGCGGATTATTACCAGCCTCAACCA
CGGCGCTTTTTTCGGCCTGGGATCGGTGGTGGCGGCCAGCGTCGTGCCAAAGCATAAGCAGGCCAGCGCGGTAGCCACTA
TGTTTATGGGCCTGACCATCGCCAACATTGGCGGCGTGCCGGCGGCCACCTGGCTTGGCGAAACCATCGGTTGGCGGATG
TCCTTCCTTGCTACTGCGGGATTAGGCCTGCTGGCGATGGTTAGCCTGTGGTTCTCCCTGCCGAAGGGCAGCGCGGGGGA
ACGTCCTGATGTCAAAAAAGAGCTTTCTGTCCTGCTGCGCCCGCAGGTGCTCTCCGCGTTGCTGACCACCGTGCTGGGCG
CCGGGGCGATGTTTACGCTGTATACCTACATTTCGCCAGTGCTCAATACGCTGACCCACGCTTCATCGCTGTTTATAACC
GCGATGCTGGTGCTGATTGGCGTCGGTTTTTCGCTAGGCAACTATCTGGGCGGCAAATTTGCTGACCGGTCGGTCTCCGG
CACGCTGAAGGGCTTTCTGCTGCTGCTGATGGCGATCATGCTGGCGATCCCGCTGCTGGCGCAATCCCAGGCCGGGGCGG
CCATCAGCATGATTGTCTGGGGCGCAGCAACCTTTGCGGTGGTTCCGCCGCTGCAGATGCGGGTTATGCGCGTAGCGCAT
GAGGCGCCGGGGCTCTCTTCTTCGGTGAATATCGGCGCGTTCAACCTCGGCAACGCGCTGGGCGCCGCCGCCGGTGGGGC
GGTGATCTCTGGCGGACTGGGCTATGCGTTTGTGCCGGTGATGGGCGCGATTATCGCTGGTCTGGCGCTGCTGCTGGTCT
GGTTTAGCGGGCGAGCGCAGCCGGAAGAGGCTTTCGCCAGCCAGTAA

Upstream 100 bases:

>100_bases
CTTTTGTCATTTCGTTCACTTTTGTTTTTTTGTGATTGATGTCATGCTTTTGACTTCTGATGTTACGCCGTCCTCTCTGA
CGGTCTGATGGAGTCATTGA

Downstream 100 bases:

>100_bases
TCATCGGCTGGGCAAGGGCAAAAAAAACCGCAGCCGGGGAGACCCCGCTGCGGTTTGTCGTTTATGCCGCCAGGTTAGCC
GCAACAAACTTCCAGTTTAC

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MKINFPLLALAIGAFGIGTTEFSPMGLLPVIAKGVDVSIPVAGMLISAYAIGVMVGAPLMTLLLSHRARRNALIFLMGIF
TVGNLLSSIAPDYTTLLLSRIITSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTIANIGGVPAATWLGETIGWRM
SFLATAGLGLLAMVSLWFSLPKGSAGERPDVKKELSVLLRPQVLSALLTTVLGAGAMFTLYTYISPVLNTLTHASSLFIT
AMLVLIGVGFSLGNYLGGKFADRSVSGTLKGFLLLLMAIMLAIPLLAQSQAGAAISMIVWGAATFAVVPPLQMRVMRVAH
EAPGLSSSVNIGAFNLGNALGAAAGGAVISGGLGYAFVPVMGAIIAGLALLLVWFSGRAQPEEAFASQ

Sequences:

>Translated_388_residues
MKINFPLLALAIGAFGIGTTEFSPMGLLPVIAKGVDVSIPVAGMLISAYAIGVMVGAPLMTLLLSHRARRNALIFLMGIF
TVGNLLSSIAPDYTTLLLSRIITSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTIANIGGVPAATWLGETIGWRM
SFLATAGLGLLAMVSLWFSLPKGSAGERPDVKKELSVLLRPQVLSALLTTVLGAGAMFTLYTYISPVLNTLTHASSLFIT
AMLVLIGVGFSLGNYLGGKFADRSVSGTLKGFLLLLMAIMLAIPLLAQSQAGAAISMIVWGAATFAVVPPLQMRVMRVAH
EAPGLSSSVNIGAFNLGNALGAAAGGAVISGGLGYAFVPVMGAIIAGLALLLVWFSGRAQPEEAFASQ
>Mature_388_residues
MKINFPLLALAIGAFGIGTTEFSPMGLLPVIAKGVDVSIPVAGMLISAYAIGVMVGAPLMTLLLSHRARRNALIFLMGIF
TVGNLLSSIAPDYTTLLLSRIITSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTIANIGGVPAATWLGETIGWRM
SFLATAGLGLLAMVSLWFSLPKGSAGERPDVKKELSVLLRPQVLSALLTTVLGAGAMFTLYTYISPVLNTLTHASSLFIT
AMLVLIGVGFSLGNYLGGKFADRSVSGTLKGFLLLLMAIMLAIPLLAQSQAGAAISMIVWGAATFAVVPPLQMRVMRVAH
EAPGLSSSVNIGAFNLGNALGAAAGGAVISGGLGYAFVPVMGAIIAGLALLLVWFSGRAQPEEAFASQ

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=382, Percent_Identity=87.696335078534, Blast_Score=634, Evalue=0.0,
Organism=Escherichia coli, GI1786595, Length=381, Percent_Identity=31.2335958005249, Blast_Score=194, Evalue=1e-50,
Organism=Escherichia coli, GI1787808, Length=344, Percent_Identity=30.2325581395349, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI145693198, Length=327, Percent_Identity=28.1345565749235, Blast_Score=107, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39960; Mature: 39960

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINFPLLALAIGAFGIGTTEFSPMGLLPVIAKGVDVSIPVAGMLISAYAIGVMVGAPLM
CCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TLLLSHRARRNALIFLMGIFTVGNLLSSIAPDYTTLLLSRIITSLNHGAFFGLGSVVAAS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VVPKHKQASAVATMFMGLTIANIGGVPAATWLGETIGWRMSFLATAGLGLLAMVSLWFSL
HCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PKGSAGERPDVKKELSVLLRPQVLSALLTTVLGAGAMFTLYTYISPVLNTLTHASSLFIT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLVLIGVGFSLGNYLGGKFADRSVSGTLKGFLLLLMAIMLAIPLLAQSQAGAAISMIVW
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
GAATFAVVPPLQMRVMRVAHEAPGLSSSVNIGAFNLGNALGAAAGGAVISGGLGYAFVPV
HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHHHCCCHHHCCCCHHHHHHH
MGAIIAGLALLLVWFSGRAQPEEAFASQ
HHHHHHHHHHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure
MKINFPLLALAIGAFGIGTTEFSPMGLLPVIAKGVDVSIPVAGMLISAYAIGVMVGAPLM
CCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TLLLSHRARRNALIFLMGIFTVGNLLSSIAPDYTTLLLSRIITSLNHGAFFGLGSVVAAS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VVPKHKQASAVATMFMGLTIANIGGVPAATWLGETIGWRMSFLATAGLGLLAMVSLWFSL
HCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PKGSAGERPDVKKELSVLLRPQVLSALLTTVLGAGAMFTLYTYISPVLNTLTHASSLFIT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLVLIGVGFSLGNYLGGKFADRSVSGTLKGFLLLLMAIMLAIPLLAQSQAGAAISMIVW
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
GAATFAVVPPLQMRVMRVAHEAPGLSSSVNIGAFNLGNALGAAAGGAVISGGLGYAFVPV
HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHHHCCCHHHCCCCHHHHHHH
MGAIIAGLALLLVWFSGRAQPEEAFASQ
HHHHHHHHHHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]