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The map label for this gene is ydhJ [H]

Identifier: 238895026

GI number: 238895026

Start: 2911565

End: 2912482

Strand: Direct

Name: ydhJ [H]

Synonym: KP1_3056

Alternate gene names: 238895026

Gene position: 2911565-2912482 (Clockwise)

Preceding gene: 238895025

Following gene: 238895027

Centisome position: 55.47

GC content: 59.04

Gene sequence:

>918_bases
TTGCCTGGTGATCTCCCTGTTATGAAAAGATTAAAATATCTGTCAACGCTGCTGGTCGCGGCCGTCGCCCTGATTGCCGC
ATGGTTGTTATGGAATTTCTACACTCAGTCACCCTGGACCCGCGACGGCAAAGTGCGCGCCGAGCAGGTTGGGATCACCC
CTCAGGTCTCCGGCAGTATTCTGCAGTTGAACGTAACCGATAACCAACGGGTCAAAGCTGGGGAAGTATTGTTTACCATC
GACGACACCCCCTATCGCATCGCGGTGCTGAACGCCCAGGCGCAGCTGGCGAAAGCCCAGGCGGAGGTGGAGAAAGCGCA
GGCGGAGCAAAGCAAGGCCGCCAGCGAGGCTCGCCGTCGCCGAAGCCTGTCGCAAAATGCCATCTCGGCTGAAGACCTTG
AGAACGTCAATACCGCCCTGAATACCGCCACCACCACCCTGGCTGCCGCCAGAGCGGGGGTCGGCGTAACTGAAGCGGCG
CTGAAACATGCGCAGTGGCAGCTCAGCCAGACGGTTGTCAAAGCGCCGGTGGATGGCTGGGTGACCAACCTTTCCACCCG
CGTCGGTGATTACGCTACCACCGGCCATCCGGTCTTTGCCCTGGTGGACAGCCATTCGTTTTACGTACTGGGCTACTTCG
AAGAGACCAAACTGCGCCACATTCGCATCGGCGATCCGGCACAAATTATTCTCTATAGCAATCAGCAGACGCTAAAGGGC
CATGTCGCCAGCATCGGCCGCGCGATTGTCGACCAGAGCGTGGAACAGGGAACCGGGCTGGTGGCCAACATCAAACCAAA
TATCCCCTGGGTTCGTCTCGCCCAACGCGTTCCGGTGCGAATTGCCTTTGATACGCTGCCGGCCGATGTCACCCTGGTCT
CCGGCACCACCTGCACTGTCTCAATTGGCGGGCAGTAA

Upstream 100 bases:

>100_bases
CAGCTGCGTGACTGGATGTATGCGGGCGACATCTGGCACCCGCTACTAATGGATCTCTCCCTGTTCGCGCTCTCGGTCTG
TCTGGCCCTGGTATTGCTCA

Downstream 100 bases:

>100_bases
TGAACCTGCAGACCCTGTCGTGGCGCACACTCCCCTGGGTTAAAGCCACCCGGCCGCAGTGGCGGTACGCATTGCGCAAC
GGCATCGCGATGTGTCTTGC

Product: putative multidrug resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MPGDLPVMKRLKYLSTLLVAAVALIAAWLLWNFYTQSPWTRDGKVRAEQVGITPQVSGSILQLNVTDNQRVKAGEVLFTI
DDTPYRIAVLNAQAQLAKAQAEVEKAQAEQSKAASEARRRRSLSQNAISAEDLENVNTALNTATTTLAAARAGVGVTEAA
LKHAQWQLSQTVVKAPVDGWVTNLSTRVGDYATTGHPVFALVDSHSFYVLGYFEETKLRHIRIGDPAQIILYSNQQTLKG
HVASIGRAIVDQSVEQGTGLVANIKPNIPWVRLAQRVPVRIAFDTLPADVTLVSGTTCTVSIGGQ

Sequences:

>Translated_305_residues
MPGDLPVMKRLKYLSTLLVAAVALIAAWLLWNFYTQSPWTRDGKVRAEQVGITPQVSGSILQLNVTDNQRVKAGEVLFTI
DDTPYRIAVLNAQAQLAKAQAEVEKAQAEQSKAASEARRRRSLSQNAISAEDLENVNTALNTATTTLAAARAGVGVTEAA
LKHAQWQLSQTVVKAPVDGWVTNLSTRVGDYATTGHPVFALVDSHSFYVLGYFEETKLRHIRIGDPAQIILYSNQQTLKG
HVASIGRAIVDQSVEQGTGLVANIKPNIPWVRLAQRVPVRIAFDTLPADVTLVSGTTCTVSIGGQ
>Mature_304_residues
PGDLPVMKRLKYLSTLLVAAVALIAAWLLWNFYTQSPWTRDGKVRAEQVGITPQVSGSILQLNVTDNQRVKAGEVLFTID
DTPYRIAVLNAQAQLAKAQAEVEKAQAEQSKAASEARRRRSLSQNAISAEDLENVNTALNTATTTLAAARAGVGVTEAAL
KHAQWQLSQTVVKAPVDGWVTNLSTRVGDYATTGHPVFALVDSHSFYVLGYFEETKLRHIRIGDPAQIILYSNQQTLKGH
VASIGRAIVDQSVEQGTGLVANIKPNIPWVRLAQRVPVRIAFDTLPADVTLVSGTTCTVSIGGQ

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=296, Percent_Identity=64.1891891891892, Blast_Score=400, Evalue=1e-113,
Organism=Escherichia coli, GI1789637, Length=290, Percent_Identity=41.3793103448276, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1790519, Length=297, Percent_Identity=34.006734006734, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1788711, Length=316, Percent_Identity=29.746835443038, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1789041, Length=307, Percent_Identity=26.0586319218241, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1790024, Length=270, Percent_Identity=25.1851851851852, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1790012, Length=259, Percent_Identity=26.2548262548263, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 32993; Mature: 32862

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGDLPVMKRLKYLSTLLVAAVALIAAWLLWNFYTQSPWTRDGKVRAEQVGITPQVSGSI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHCCCCCCCCCCE
LQLNVTDNQRVKAGEVLFTIDDTPYRIAVLNAQAQLAKAQAEVEKAQAEQSKAASEARRR
EEEEECCCCCEEECEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLSQNAISAEDLENVNTALNTATTTLAAARAGVGVTEAALKHAQWQLSQTVVKAPVDGW
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
VTNLSTRVGDYATTGHPVFALVDSHSFYVLGYFEETKLRHIRIGDPAQIILYSNQQTLKG
HHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEECCCEEEEEECCCEEEEEECCCHHHHH
HVASIGRAIVDQSVEQGTGLVANIKPNIPWVRLAQRVPVRIAFDTLPADVTLVSGTTCTV
HHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCEEEEEECCCCCEEEEECCEEEE
SIGGQ
EECCC
>Mature Secondary Structure 
PGDLPVMKRLKYLSTLLVAAVALIAAWLLWNFYTQSPWTRDGKVRAEQVGITPQVSGSI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHCCCCCCCCCCE
LQLNVTDNQRVKAGEVLFTIDDTPYRIAVLNAQAQLAKAQAEVEKAQAEQSKAASEARRR
EEEEECCCCCEEECEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLSQNAISAEDLENVNTALNTATTTLAAARAGVGVTEAALKHAQWQLSQTVVKAPVDGW
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
VTNLSTRVGDYATTGHPVFALVDSHSFYVLGYFEETKLRHIRIGDPAQIILYSNQQTLKG
HHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEECCCEEEEEECCCEEEEEECCCHHHHH
HVASIGRAIVDQSVEQGTGLVANIKPNIPWVRLAQRVPVRIAFDTLPADVTLVSGTTCTV
HHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCEEEEEECCCCCEEEEECCEEEE
SIGGQ
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]