Click here to switch to the map view.

The map label for this gene is ydgK [H]

Identifier: 238895006

GI number: 238895006

Start: 2893972

End: 2894412

Strand: Direct

Name: ydgK [H]

Synonym: KP1_3034

Alternate gene names: 238895006

Gene position: 2893972-2894412 (Clockwise)

Preceding gene: 238895005

Following gene: 238895007

Centisome position: 55.14

GC content: 59.64

Gene sequence:

>441_bases
ATGACGTCTCAATCTGCAGAGCGCATCGGCGGATGGCTGCTGGCTCCGCTGGCCTGGTTGCTGGTGGCGCTGCTGAGCGC
CTCGTTATCGCTGCTGTTTTTTGCCAATGCGCTGATGTCGCCGCAGACCTATACCCTACTGCGCGCCATGAGCGCGGGCC
ATATGGCGCTGTGGGTCGCCTCGCTGCTGTTTGCCCTCGCCATGTGGTATTACACGCTCTGGCTGACTATCGCCTTTTTC
AAGCGGCGCTCGGTGGTGCCGAAACACTACATTATCTGGCTGCTCATCACCCTGCTGCTGGCGATAAAGGCTTTTGCCTT
CTCGCCGGTCTCGGATGTGCTTGCCCTGCGTCAGCTGCTGTTTCCGCTGCTGGCCGCTGCGCTGCTGGCGCCCTATTTTC
GCCGTTCGCAGCGGGTAAAACGGACTTTTGTTAATCCGTAA

Upstream 100 bases:

>100_bases
AAGGCTGGGATGCCAGAAAGCGTGCGTATTGCCTGAAAATCCAGCCAGCTACAGGGTCGTTCGCACGAAATCTTATTTAT
TCAACAAAGCCGGGAGAAAC

Downstream 100 bases:

>100_bases
TACCCCCACACTTAACCTGTTGTCGCTGGTATCGTTTTATTCGATAATAAGCGGCTTTTTTTCGTTTCAGGTCGCATGAT
GGCTGATTATTTACTGCTCT

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTSQSAERIGGWLLAPLAWLLVALLSASLSLLFFANALMSPQTYTLLRAMSAGHMALWVASLLFALAMWYYTLWLTIAFF
KRRSVVPKHYIIWLLITLLLAIKAFAFSPVSDVLALRQLLFPLLAAALLAPYFRRSQRVKRTFVNP

Sequences:

>Translated_146_residues
MTSQSAERIGGWLLAPLAWLLVALLSASLSLLFFANALMSPQTYTLLRAMSAGHMALWVASLLFALAMWYYTLWLTIAFF
KRRSVVPKHYIIWLLITLLLAIKAFAFSPVSDVLALRQLLFPLLAAALLAPYFRRSQRVKRTFVNP
>Mature_145_residues
TSQSAERIGGWLLAPLAWLLVALLSASLSLLFFANALMSPQTYTLLRAMSAGHMALWVASLLFALAMWYYTLWLTIAFFK
RRSVVPKHYIIWLLITLLLAIKAFAFSPVSDVLALRQLLFPLLAAALLAPYFRRSQRVKRTFVNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll0481 [H]

Homologues:

Organism=Escherichia coli, GI87081948, Length=146, Percent_Identity=66.4383561643836, Blast_Score=162, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019690 [H]

Pfam domain/function: PF10754 DUF2569 [H]

EC number: NA

Molecular weight: Translated: 16517; Mature: 16386

Theoretical pI: Translated: 11.79; Mature: 11.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQSAERIGGWLLAPLAWLLVALLSASLSLLFFANALMSPQTYTLLRAMSAGHMALWVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
SLLFALAMWYYTLWLTIAFFKRRSVVPKHYIIWLLITLLLAIKAFAFSPVSDVLALRQLL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FPLLAAALLAPYFRRSQRVKRTFVNP
HHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSQSAERIGGWLLAPLAWLLVALLSASLSLLFFANALMSPQTYTLLRAMSAGHMALWVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
SLLFALAMWYYTLWLTIAFFKRRSVVPKHYIIWLLITLLLAIKAFAFSPVSDVLALRQLL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FPLLAAALLAPYFRRSQRVKRTFVNP
HHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]