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The map label for this gene is ydcJ [H]

Identifier: 238894988

GI number: 238894988

Start: 2876643

End: 2877986

Strand: Reverse

Name: ydcJ [H]

Synonym: KP1_3014

Alternate gene names: 238894988

Gene position: 2877986-2876643 (Counterclockwise)

Preceding gene: 238894993

Following gene: 238894987

Centisome position: 54.83

GC content: 61.9

Gene sequence:

>1344_bases
ATGGCGAACACCATCACGGCTGATGAGATTCGGGAGCACTTTTCGCAGGCCATGTCGGCCATGTACCAGCAGGAAGTTCC
GCAGTACGGAACGCTGCTGGAGCTGGTGGCTGACGTCAACCTGGCGGTACTGGAAAATAATCCGCAGCTGCATGAACAGC
TCGCTAACGCTGACGAGCTGGCGCGCTTAAACGTGGAGCGCCACGGCGCGATTCGCGTGGGCACAGCGGAAGAACTGGCG
ACGCTCCGTCGCATGTTTGCCATCATGGGAATGTATCCCGTTAGCTATTACGATCTCTCGCAGGCCGGCGTGCCGGTCCA
CTCCACGGCGTTTCGTCCCATCGACGATGCCGCGCTGGCGCGCAATCCATTTCGGATTTTCACCTCGCTGCTGCGCCTGG
AGCTGATTGAAAATCGCGCCCTGCGCGAGCGGGCCGAGGCGATCCTCGCGCGGCGCAAAATCTTCACCCCCCGCTGCCTG
GCGCTGATTGCGCAGTATGAAGCAGAGGGCGAATTCACCTCTGCCGACGCGCGCGAGTTTGTCCAGGAGGCGCTGGAGAC
GTTCCGCTGGCACCGGCAAGCCACCGTCGATGAGGAGACTTACCATGCTCTGCATCGCGAGCACCGCCTGATTGCCGATG
TGGTCTGTTTCCCGGGGTGTCATATCAACCATCTCACGCCGCGGACGCTGGATATTGACCGCGTCCAGTCCCTGATGCCG
GAGTGCGGTATTGAACCCAAAGCGTTGATTGAAGGGCCACCGCGCCGGGAGGTCCCGATCCTCCTGCGGCAGACCAGCTT
TAAGGCGCTTGAGGAGCCGGTGATGTTCGCCGGAGAACACCGAGGCACCCATAGCGCCCGCTTTGGCGAAATTGAGCAGC
GGGGCGTGGCGCTGACGCCGAAAGGGCGCGCGCTGTACGATCGGCTGCTGCAGGCGGCAGGAACCGGGAAAGACAATCTC
AGCCACCAGCAGCATCTACAGGAGGTGTTTAGCGAATTTCCCGACAGCGAATTTCTGCTCCGTCAGCAGGGGCTGGCCTG
GTTTCGCTACCGCCTGACGCCCACGGGTGAGGCACATCGCCAGGCGTTTCGCCCGGGCGACGATCCGCAGCCGCTGATTG
AGCGCGGGTGGGTGGTCGCCCAGCCGATTATTTATGAAGATTTTTTACCGGTCAGCGCGGCGGGCATTTTTCAGTCCAAT
CTGGGCAACGAAACCCAGGCGCGCAGCCACGGGAACGCCAGTCGCGAGGCGTTTGAGGCAGCTCTGGGCTGCCCGGTGCA
GGATGAGTTTGAACTATACCGACAGGCGGAGGAGCGCAGCAAACGACGTTGCGGTCTGCTGTAA

Upstream 100 bases:

>100_bases
GCCGGCGGCAGGTTATCGCCATCACAGTTTGTAAATTCTTCCCCCCGCCGCGAGGCAGCTTTCCTACACTCCAGGAAGTA
TTCACTGGAGGTAACACATC

Downstream 100 bases:

>100_bases
AATCAGTACCCTGCTGGCATCAGCCTTACAGGGAGCAGGTTATGCAACATCCGTCGAAACCGTTGGCGAAAACCCGTCAG
GGAACGCTGGCCGGGAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MANTITADEIREHFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEQLANADELARLNVERHGAIRVGTAEELA
TLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDAALARNPFRIFTSLLRLELIENRALRERAEAILARRKIFTPRCL
ALIAQYEAEGEFTSADAREFVQEALETFRWHRQATVDEETYHALHREHRLIADVVCFPGCHINHLTPRTLDIDRVQSLMP
ECGIEPKALIEGPPRREVPILLRQTSFKALEEPVMFAGEHRGTHSARFGEIEQRGVALTPKGRALYDRLLQAAGTGKDNL
SHQQHLQEVFSEFPDSEFLLRQQGLAWFRYRLTPTGEAHRQAFRPGDDPQPLIERGWVVAQPIIYEDFLPVSAAGIFQSN
LGNETQARSHGNASREAFEAALGCPVQDEFELYRQAEERSKRRCGLL

Sequences:

>Translated_447_residues
MANTITADEIREHFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEQLANADELARLNVERHGAIRVGTAEELA
TLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDAALARNPFRIFTSLLRLELIENRALRERAEAILARRKIFTPRCL
ALIAQYEAEGEFTSADAREFVQEALETFRWHRQATVDEETYHALHREHRLIADVVCFPGCHINHLTPRTLDIDRVQSLMP
ECGIEPKALIEGPPRREVPILLRQTSFKALEEPVMFAGEHRGTHSARFGEIEQRGVALTPKGRALYDRLLQAAGTGKDNL
SHQQHLQEVFSEFPDSEFLLRQQGLAWFRYRLTPTGEAHRQAFRPGDDPQPLIERGWVVAQPIIYEDFLPVSAAGIFQSN
LGNETQARSHGNASREAFEAALGCPVQDEFELYRQAEERSKRRCGLL
>Mature_446_residues
ANTITADEIREHFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEQLANADELARLNVERHGAIRVGTAEELAT
LRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDAALARNPFRIFTSLLRLELIENRALRERAEAILARRKIFTPRCLA
LIAQYEAEGEFTSADAREFVQEALETFRWHRQATVDEETYHALHREHRLIADVVCFPGCHINHLTPRTLDIDRVQSLMPE
CGIEPKALIEGPPRREVPILLRQTSFKALEEPVMFAGEHRGTHSARFGEIEQRGVALTPKGRALYDRLLQAAGTGKDNLS
HQQHLQEVFSEFPDSEFLLRQQGLAWFRYRLTPTGEAHRQAFRPGDDPQPLIERGWVVAQPIIYEDFLPVSAAGIFQSNL
GNETQARSHGNASREAFEAALGCPVQDEFELYRQAEERSKRRCGLL

Specific function: Unknown

COG id: COG5383

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv3292 [H]

Homologues:

Organism=Escherichia coli, GI1787692, Length=447, Percent_Identity=85.9060402684564, Blast_Score=805, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009770 [H]

Pfam domain/function: PF07063 DUF1338 [H]

EC number: NA

Molecular weight: Translated: 50716; Mature: 50585

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANTITADEIREHFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEQLANADEL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCHHHHHHHHCHHHH
ARLNVERHGAIRVGTAEELATLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDAALA
HHHCHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCCCCCHHHHC
RNPFRIFTSLLRLELIENRALRERAEAILARRKIFTPRCLALIAQYEAEGEFTSADAREF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHH
VQEALETFRWHRQATVDEETYHALHREHRLIADVVCFPGCHINHLTPRTLDIDRVQSLMP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
ECGIEPKALIEGPPRREVPILLRQTSFKALEEPVMFAGEHRGTHSARFGEIEQRGVALTP
HCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHCCEEECC
KGRALYDRLLQAAGTGKDNLSHQQHLQEVFSEFPDSEFLLRQQGLAWFRYRLTPTGEAHR
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEECCCCHHHH
QAFRPGDDPQPLIERGWVVAQPIIYEDFLPVSAAGIFQSNLGNETQARSHGNASREAFEA
HHCCCCCCCCHHHHCCCEEECCHHHHHCCCHHHHHHHHHCCCCCHHHHHCCCHHHHHHHH
ALGCPVQDEFELYRQAEERSKRRCGLL
HHCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ANTITADEIREHFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEQLANADEL
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCHHHHHHHHCHHHH
ARLNVERHGAIRVGTAEELATLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDAALA
HHHCHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCCCCCHHHHC
RNPFRIFTSLLRLELIENRALRERAEAILARRKIFTPRCLALIAQYEAEGEFTSADAREF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHH
VQEALETFRWHRQATVDEETYHALHREHRLIADVVCFPGCHINHLTPRTLDIDRVQSLMP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
ECGIEPKALIEGPPRREVPILLRQTSFKALEEPVMFAGEHRGTHSARFGEIEQRGVALTP
HCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHCCEEECC
KGRALYDRLLQAAGTGKDNLSHQQHLQEVFSEFPDSEFLLRQQGLAWFRYRLTPTGEAHR
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEECCCCHHHH
QAFRPGDDPQPLIERGWVVAQPIIYEDFLPVSAAGIFQSNLGNETQARSHGNASREAFEA
HHCCCCCCCCHHHHCCCEEECCHHHHHCCCHHHHHHHHHCCCCCHHHHHCCCHHHHHHHH
ALGCPVQDEFELYRQAEERSKRRCGLL
HHCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]