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The map label for this gene is ydcK [H]

Identifier: 238894983

GI number: 238894983

Start: 2870270

End: 2871250

Strand: Direct

Name: ydcK [H]

Synonym: KP1_3009

Alternate gene names: 238894983

Gene position: 2870270-2871250 (Clockwise)

Preceding gene: 238894979

Following gene: 238894986

Centisome position: 54.69

GC content: 61.06

Gene sequence:

>981_bases
ATGCGTAAATACCGTCTCAGCGAACAGACCCGGCAGTATTGTTATGAGGAAGAGCATGGCAAACAAAGCGTCACCCTGCG
CCAGATCGTGGCGCTTATTGATTTCGCTGACGTCAAAGCGGGCAGCGAAGGCGGCTGGGTGGATGAGGAATGCGCTCTCA
GCCAGCAGGGGGAGTGCTGGATCTACGATGTCAACAGCGTGGTCTTCGCCGGGGCGCGCATCCGTGACGACGCCCGCTTA
ACCGGGTTCTGCGTGGTCAGCCATGAGGCCACCATCGGCGGACGGGCCTGCATTCACGCCTCGCAGATCAGCCATCACGC
GCAGATCAGTGACAACGTCACGGTTATGCAGAGCCAGGTGCGCGGTTATTGTCGCCTTGCCGACGAGGCGCGCCTTCTCC
CCCACTGCCAGGTGATTGCCGCGCGCGGGTTAACCGCCGATCGCGACAAAGTCCTGCAGATCTATCAGCGAGCCACCGTC
AGCGCCTCGCGCATTCTCCACCAGGCGCAAATCTACGGCGATGCCTTCGTTGAGCATGCGTTTGTCGAACATCGGGCGGA
AGTGTTTGACCAGGCAAGACTTGAAGGGAACGAAGAAAACGACGTCTGGGTATGCGATAACGCCCGGGTATACGGGCACG
CGCGCCTGATCGCCGGTCGCGGAGAGGATGCCATTCCCACCGTGCGCTACAGTTCGCAGGTGGCAGAGAATGCGGTGATT
GAAGGCAACTGCCTGCTGAAGCATCGGGCGATGGTCGGCGGCGAGGCGCAGCTGCGAGGTGGTCCGATTCTGCTCGACGA
CGATGTGCTGATCCAGGGGCGGACAGTCATCACCGGCGATGTGATCGTTGAGCACCAGGTCTCCATCAATGACGAGGTGC
AGATTGCCGCACAGGAGGGAGAGGCCATTCATCTGCGCGGCCCGAAAACGCTTGACGGCCAGCAGCACATCACCCGCACG
CCGCTGTTAGGCGCGCTTTAA

Upstream 100 bases:

>100_bases
TATCAATTTAATTTGAAGTTGCATTCTAAAGGAACCTTATCCCGCGCGCTATGGCGATCTTTGCTATGTTTATGTTAACC
ATAAGTAATAAGGATCGGCC

Downstream 100 bases:

>100_bases
TGCCTCATCGCGGTCAATAATGCGGGCGTAGATATTCTGATCGTCATAGCTACCGTTCAGATACTCGGCTTGTCGGAGAC
AGCCTTCCAGAACAAACCCG

Product: putative LpxA-like enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MRKYRLSEQTRQYCYEEEHGKQSVTLRQIVALIDFADVKAGSEGGWVDEECALSQQGECWIYDVNSVVFAGARIRDDARL
TGFCVVSHEATIGGRACIHASQISHHAQISDNVTVMQSQVRGYCRLADEARLLPHCQVIAARGLTADRDKVLQIYQRATV
SASRILHQAQIYGDAFVEHAFVEHRAEVFDQARLEGNEENDVWVCDNARVYGHARLIAGRGEDAIPTVRYSSQVAENAVI
EGNCLLKHRAMVGGEAQLRGGPILLDDDVLIQGRTVITGDVIVEHQVSINDEVQIAAQEGEAIHLRGPKTLDGQQHITRT
PLLGAL

Sequences:

>Translated_326_residues
MRKYRLSEQTRQYCYEEEHGKQSVTLRQIVALIDFADVKAGSEGGWVDEECALSQQGECWIYDVNSVVFAGARIRDDARL
TGFCVVSHEATIGGRACIHASQISHHAQISDNVTVMQSQVRGYCRLADEARLLPHCQVIAARGLTADRDKVLQIYQRATV
SASRILHQAQIYGDAFVEHAFVEHRAEVFDQARLEGNEENDVWVCDNARVYGHARLIAGRGEDAIPTVRYSSQVAENAVI
EGNCLLKHRAMVGGEAQLRGGPILLDDDVLIQGRTVITGDVIVEHQVSINDEVQIAAQEGEAIHLRGPKTLDGQQHITRT
PLLGAL
>Mature_326_residues
MRKYRLSEQTRQYCYEEEHGKQSVTLRQIVALIDFADVKAGSEGGWVDEECALSQQGECWIYDVNSVVFAGARIRDDARL
TGFCVVSHEATIGGRACIHASQISHHAQISDNVTVMQSQVRGYCRLADEARLLPHCQVIAARGLTADRDKVLQIYQRATV
SASRILHQAQIYGDAFVEHAFVEHRAEVFDQARLEGNEENDVWVCDNARVYGHARLIAGRGEDAIPTVRYSSQVAENAVI
EGNCLLKHRAMVGGEAQLRGGPILLDDDVLIQGRTVITGDVIVEHQVSINDEVQIAAQEGEAIHLRGPKTLDGQQHITRT
PLLGAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1787698, Length=326, Percent_Identity=55.8282208588957, Blast_Score=374, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36030; Mature: 36030

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYRLSEQTRQYCYEEEHGKQSVTLRQIVALIDFADVKAGSEGGWVDEECALSQQGECW
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEE
IYDVNSVVFAGARIRDDARLTGFCVVSHEATIGGRACIHASQISHHAQISDNVTVMQSQV
EEECCCEEEECCEECCCCCEEEEEEEECCCCCCCCEEEEHHHHCCCCCCCCCHHHHHHHH
RGYCRLADEARLLPHCQVIAARGLTADRDKVLQIYQRATVSASRILHQAQIYGDAFVEHA
HHHEEECCCHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVEHRAEVFDQARLEGNEENDVWVCDNARVYGHARLIAGRGEDAIPTVRYSSQVAENAVI
HHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCCEEECHHHHHCCEEE
EGNCLLKHRAMVGGEAQLRGGPILLDDDVLIQGRTVITGDVIVEHQVSINDEVQIAAQEG
ECCEEEEEHHHCCCCCEECCCCEEECCCEEEECCEEEECCEEEEEEECCCCCEEEEECCC
EAIHLRGPKTLDGQQHITRTPLLGAL
CEEEECCCCCCCCCCHHCCCCCCCCC
>Mature Secondary Structure
MRKYRLSEQTRQYCYEEEHGKQSVTLRQIVALIDFADVKAGSEGGWVDEECALSQQGECW
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEE
IYDVNSVVFAGARIRDDARLTGFCVVSHEATIGGRACIHASQISHHAQISDNVTVMQSQV
EEECCCEEEECCEECCCCCEEEEEEEECCCCCCCCEEEEHHHHCCCCCCCCCHHHHHHHH
RGYCRLADEARLLPHCQVIAARGLTADRDKVLQIYQRATVSASRILHQAQIYGDAFVEHA
HHHEEECCCHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVEHRAEVFDQARLEGNEENDVWVCDNARVYGHARLIAGRGEDAIPTVRYSSQVAENAVI
HHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCCEEECHHHHHCCEEE
EGNCLLKHRAMVGGEAQLRGGPILLDDDVLIQGRTVITGDVIVEHQVSINDEVQIAAQEG
ECCEEEEEHHHCCCCCEECCCCEEECCCEEEECCEEEECCEEEEEEECCCCCEEEEECCC
EAIHLRGPKTLDGQQHITRTPLLGAL
CEEEECCCCCCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]