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The map label for this gene is ybcO [H]

Identifier: 238894977

GI number: 238894977

Start: 2864496

End: 2865662

Strand: Direct

Name: ybcO [H]

Synonym: KP1_3003

Alternate gene names: 238894977

Gene position: 2864496-2865662 (Clockwise)

Preceding gene: 238894974

Following gene: 238894979

Centisome position: 54.58

GC content: 66.75

Gene sequence:

>1167_bases
ATGCGCTCGTTTAGTCTTCCGCTTCCCACTCTGTTCGCTGGCTTCGTCGCCGTGTTGGTGGGGTACGCCAGCTCCGCCGC
CATCATCTGGCAGGCCGCCGCCGCGGCCGGCGCTACCCCCGGGCAGATCGCCGGCTGGATGACGGCTCTTGGCCTCGCCA
TGGGCATCAGTACTCTCGCGCTGAGCGCCTGGCGGAAAGTTCCTGTGCTCACCGCCTGGTCAACGCCGGGCGCTGCGCTG
TTAGTTAGCGGCCTGCAGGGGGTGACCCTCGCCGAGGCCGTGGGGATCTTTATTTTCGCCAACGCGCTGATCGTTATCTG
CGGCGCCACCGGCCTGTTTGCCCGGCTGATGCAGATCATTCCCCATTCGCTGGCCGCCGCGATGCTGGCTGGGATCCTGC
TACGGTTTGGTTTGCAGGCCTTCGCCGGCTTACAGGATCATCTGCCGCTGTGCGGCGGGATGCTCGCCGCCTGGCTGCTG
TGTAAAGCGCTGTGGCCCCGCTTCGCCGTGGTGGCCGCGCTGGTGATTGGAGCGCTGATTGCGGCGGCGTCCGGGGATGT
GGCTAGCGCCGCCGTGCCGTTGGCATTTGTGACGCCGGAATGGGTCGCCCCGCAGTTTACTCCGGCGCTTTTGCTCAGCG
TCGGTCTGCCGTTCTTCCTCGTCACCATGGCCTCGCAGAACGCTCCGGGGTTCGCCACCCTGCAGGCATCAGGCTATACC
GTACCGGTCTCCGCACTGATCGTCGTTTGCGGGGGGTTGGCACTACTGCTGGCGCCGTTTGGGGTTTATTCCATCTGCAT
CGCGGCGATCACCGCCGCCATATGCCAGAGCCCGGAGGCGCACCCGGATCCGAACCAGCGCTGGCTGGCGGCCATAGCTG
CGGGCGGTTTTTATCTGCTGGCCGGTCTGTTCGGCGGGTCAATCACCGCCCTGATGTCGGCCCTGCCGCCGGCGTGGATC
CAGATGCTGGCGGGTCTGGCGCTGCTCGGCACCATCGGCGGGAGTCTGTTTCAGGCAGTGCATCAGGCCAGTGAACGCGA
TGCGGCGGTGCTAACCTTCCTGGTCACCGCCAGCGGGGTGACGCTGGCGGGAATTGGCTCCGCCTTCTGGGGCGTGGTGC
TCGGCGGGGTGAGTTACGGCGTGCTATCCGCGCTGCGCCGCCCGTAG

Upstream 100 bases:

>100_bases
GCGAGTATTTCTCCCAGGGTAGCTGCGCGAACCACCGCTTGTGCGTTATAACGCACAATGATACAGTGAATGGATGTTAT
AACGCACATGAGAATCATCG

Downstream 100 bases:

>100_bases
CTGGGAGGGCGTCAGCCCGGTGGCGGCTTTGACCCGATGGCTGAAATGGCTGGGGGAGCTAAAACCACAGGCCAGCGCTA
TCTCGGTTAACGGCAGCGCG

Product: putative benzoate membrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MRSFSLPLPTLFAGFVAVLVGYASSAAIIWQAAAAAGATPGQIAGWMTALGLAMGISTLALSAWRKVPVLTAWSTPGAAL
LVSGLQGVTLAEAVGIFIFANALIVICGATGLFARLMQIIPHSLAAAMLAGILLRFGLQAFAGLQDHLPLCGGMLAAWLL
CKALWPRFAVVAALVIGALIAAASGDVASAAVPLAFVTPEWVAPQFTPALLLSVGLPFFLVTMASQNAPGFATLQASGYT
VPVSALIVVCGGLALLLAPFGVYSICIAAITAAICQSPEAHPDPNQRWLAAIAAGGFYLLAGLFGGSITALMSALPPAWI
QMLAGLALLGTIGGSLFQAVHQASERDAAVLTFLVTASGVTLAGIGSAFWGVVLGGVSYGVLSALRRP

Sequences:

>Translated_388_residues
MRSFSLPLPTLFAGFVAVLVGYASSAAIIWQAAAAAGATPGQIAGWMTALGLAMGISTLALSAWRKVPVLTAWSTPGAAL
LVSGLQGVTLAEAVGIFIFANALIVICGATGLFARLMQIIPHSLAAAMLAGILLRFGLQAFAGLQDHLPLCGGMLAAWLL
CKALWPRFAVVAALVIGALIAAASGDVASAAVPLAFVTPEWVAPQFTPALLLSVGLPFFLVTMASQNAPGFATLQASGYT
VPVSALIVVCGGLALLLAPFGVYSICIAAITAAICQSPEAHPDPNQRWLAAIAAGGFYLLAGLFGGSITALMSALPPAWI
QMLAGLALLGTIGGSLFQAVHQASERDAAVLTFLVTASGVTLAGIGSAFWGVVLGGVSYGVLSALRRP
>Mature_388_residues
MRSFSLPLPTLFAGFVAVLVGYASSAAIIWQAAAAAGATPGQIAGWMTALGLAMGISTLALSAWRKVPVLTAWSTPGAAL
LVSGLQGVTLAEAVGIFIFANALIVICGATGLFARLMQIIPHSLAAAMLAGILLRFGLQAFAGLQDHLPLCGGMLAAWLL
CKALWPRFAVVAALVIGALIAAASGDVASAAVPLAFVTPEWVAPQFTPALLLSVGLPFFLVTMASQNAPGFATLQASGYT
VPVSALIVVCGGLALLLAPFGVYSICIAAITAAICQSPEAHPDPNQRWLAAIAAGGFYLLAGLFGGSITALMSALPPAWI
QMLAGLALLGTIGGSLFQAVHQASERDAAVLTFLVTASGVTLAGIGSAFWGVVLGGVSYGVLSALRRP

Specific function: Unknown

COG id: COG3135

COG function: function code Q; Uncharacterized protein involved in benzoate metabolism

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081909, Length=383, Percent_Identity=70.4960835509138, Blast_Score=517, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004711 [H]

Pfam domain/function: PF03594 BenE [H]

EC number: NA

Molecular weight: Translated: 39219; Mature: 39219

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFSLPLPTLFAGFVAVLVGYASSAAIIWQAAAAAGATPGQIAGWMTALGLAMGISTLA
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LSAWRKVPVLTAWSTPGAALLVSGLQGVTLAEAVGIFIFANALIVICGATGLFARLMQII
HHHHHCCCEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
PHSLAAAMLAGILLRFGLQAFAGLQDHLPLCGGMLAAWLLCKALWPRFAVVAALVIGALI
HHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAASGDVASAAVPLAFVTPEWVAPQFTPALLLSVGLPFFLVTMASQNAPGFATLQASGYT
HHCCCCHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
VPVSALIVVCGGLALLLAPFGVYSICIAAITAAICQSPEAHPDPNQRWLAAIAAGGFYLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
AGLFGGSITALMSALPPAWIQMLAGLALLGTIGGSLFQAVHQASERDAAVLTFLVTASGV
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
TLAGIGSAFWGVVLGGVSYGVLSALRRP
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSFSLPLPTLFAGFVAVLVGYASSAAIIWQAAAAAGATPGQIAGWMTALGLAMGISTLA
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LSAWRKVPVLTAWSTPGAALLVSGLQGVTLAEAVGIFIFANALIVICGATGLFARLMQII
HHHHHCCCEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
PHSLAAAMLAGILLRFGLQAFAGLQDHLPLCGGMLAAWLLCKALWPRFAVVAALVIGALI
HHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAASGDVASAAVPLAFVTPEWVAPQFTPALLLSVGLPFFLVTMASQNAPGFATLQASGYT
HHCCCCHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
VPVSALIVVCGGLALLLAPFGVYSICIAAITAAICQSPEAHPDPNQRWLAAIAAGGFYLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
AGLFGGSITALMSALPPAWIQMLAGLALLGTIGGSLFQAVHQASERDAAVLTFLVTASGV
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
TLAGIGSAFWGVVLGGVSYGVLSALRRP
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]