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The map label for this gene is ydcX [H]

Identifier: 238894959

GI number: 238894959

Start: 2848796

End: 2849023

Strand: Reverse

Name: ydcX [H]

Synonym: KP1_2985

Alternate gene names: 238894959

Gene position: 2849023-2848796 (Counterclockwise)

Preceding gene: 238894961

Following gene: 238894958

Centisome position: 54.28

GC content: 51.75

Gene sequence:

>228_bases
ATGGCAGATAATCATCCCACCATGGAACGCCCCTCAGGGAAGGAAAAAGTAAGAATGACGTTATATCAAAAAATGTTGGT
GTTTTACGCCATTATGGGCGTGATATGCGCCGTGATTAGCTGGTTTTTAACCAAAGAGAGCCGGATGATCCGCCTGCTGG
CGGCCCTGCTGATCGGCGCCACCTGGCCGTTCAGCTTCCCGATGGCGCTGCTCGTCTCGCTGTTTTAA

Upstream 100 bases:

>100_bases
GCCAGCGGTTGCGCTATCAGATTAAGACGAATCAGGCTTTATTCTGAATATTCAGCCCGTTTCTGATTTTGTTATACAGG
TATCTCTGAATCACGACGTC

Downstream 100 bases:

>100_bases
CCCTCAGGCGCTAGACGGCAGAAAAGGGTAGCACAAAGGATAAGGTTACTGTATAAAAAACCAGTAACCTTATCATGGAG
GCATACAGGTGAACGGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MADNHPTMERPSGKEKVRMTLYQKMLVFYAIMGVICAVISWFLTKESRMIRLLAALLIGATWPFSFPMALLVSLF

Sequences:

>Translated_75_residues
MADNHPTMERPSGKEKVRMTLYQKMLVFYAIMGVICAVISWFLTKESRMIRLLAALLIGATWPFSFPMALLVSLF
>Mature_74_residues
ADNHPTMERPSGKEKVRMTLYQKMLVFYAIMGVICAVISWFLTKESRMIRLLAALLIGATWPFSFPMALLVSLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjdO [H]

Homologues:

Organism=Escherichia coli, GI87081912, Length=57, Percent_Identity=61.4035087719298, Blast_Score=77, Evalue=2e-16,
Organism=Escherichia coli, GI87082373, Length=57, Percent_Identity=54.3859649122807, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019689 [H]

Pfam domain/function: PF10753 DUF2566 [H]

EC number: NA

Molecular weight: Translated: 8584; Mature: 8452

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
9.3 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
8.1 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADNHPTMERPSGKEKVRMTLYQKMLVFYAIMGVICAVISWFLTKESRMIRLLAALLIGA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TWPFSFPMALLVSLF
CCCCHHHHHHHHHHC
>Mature Secondary Structure 
ADNHPTMERPSGKEKVRMTLYQKMLVFYAIMGVICAVISWFLTKESRMIRLLAALLIGA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TWPFSFPMALLVSLF
CCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]