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The map label for this gene is ydcZ [H]

Identifier: 238894954

GI number: 238894954

Start: 2843935

End: 2844384

Strand: Direct

Name: ydcZ [H]

Synonym: KP1_2979

Alternate gene names: 238894954

Gene position: 2843935-2844384 (Clockwise)

Preceding gene: 238894953

Following gene: 238894957

Centisome position: 54.19

GC content: 63.11

Gene sequence:

>450_bases
ATGAACGCGTCGCTCACTCTCGCCTGCCTGATCGCCGCCGGCGTTGGCCTGGTAGTGCAGAACACTCTGATGGTGCGCAT
CACCCAGTCGGCGTCGACGATCCTTATCGCTATGCTGCTCAATTCGCTGGTCGGGATCGTTATCTTCGTGACGATGTTAC
TGCTGCGCCAGGGCGTCGCCGGCTTTCAGGAGCTGGCCCTGAGCGTGAAGTGGTGGACGCTGATCCCCGGCCTGCTGGGG
TCCTTTTTCGTCTTCGCCAGCATCAGCGGTTATCAAAACGTTGGCGCGGCGACGACCATTGCGGTACTGGTGGCCAGCCA
GCTGGTGGGCGGGTTGATCATGGATTTAGTTCGCGCCCACGGCGTGCCGGTGCGGGCGCTGATCGGACCGTTATGCGGGG
CGGTGATGCTGGTGGTGGGCGCCTGGCTGGTGGCCAGACGCCAGTTCTGA

Upstream 100 bases:

>100_bases
CCGGGCAGATGCCGCAGGTGGGCACCAAATTTGGCCGCTGGCTGGATCTGACCTTTATGCAGCTGCAGCTGGATGCGCGT
CAGGACCCGGACGGCAAAGC

Downstream 100 bases:

>100_bases
GCGCATCTTCAGAGGATCGCGCCGCCTTTGGTCAACTGCTCGCGGCGCGCGTCCTGCTCTTCCTGATGCTGTCGCCCATG
ATGGGCGATGGCGGTGCGCA

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MNASLTLACLIAAGVGLVVQNTLMVRITQSASTILIAMLLNSLVGIVIFVTMLLLRQGVAGFQELALSVKWWTLIPGLLG
SFFVFASISGYQNVGAATTIAVLVASQLVGGLIMDLVRAHGVPVRALIGPLCGAVMLVVGAWLVARRQF

Sequences:

>Translated_149_residues
MNASLTLACLIAAGVGLVVQNTLMVRITQSASTILIAMLLNSLVGIVIFVTMLLLRQGVAGFQELALSVKWWTLIPGLLG
SFFVFASISGYQNVGAATTIAVLVASQLVGGLIMDLVRAHGVPVRALIGPLCGAVMLVVGAWLVARRQF
>Mature_149_residues
MNASLTLACLIAAGVGLVVQNTLMVRITQSASTILIAMLLNSLVGIVIFVTMLLLRQGVAGFQELALSVKWWTLIPGLLG
SFFVFASISGYQNVGAATTIAVLVASQLVGGLIMDLVRAHGVPVRALIGPLCGAVMLVVGAWLVARRQF

Specific function: Unknown

COG id: COG3238

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787718, Length=149, Percent_Identity=81.2080536912752, Blast_Score=241, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006750 [H]

Pfam domain/function: PF04657 DUF606 [H]

EC number: NA

Molecular weight: Translated: 15591; Mature: 15591

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASLTLACLIAAGVGLVVQNTLMVRITQSASTILIAMLLNSLVGIVIFVTMLLLRQGVA
CCCHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
GFQELALSVKWWTLIPGLLGSFFVFASISGYQNVGAATTIAVLVASQLVGGLIMDLVRAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GVPVRALIGPLCGAVMLVVGAWLVARRQF
CCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNASLTLACLIAAGVGLVVQNTLMVRITQSASTILIAMLLNSLVGIVIFVTMLLLRQGVA
CCCHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
GFQELALSVKWWTLIPGLLGSFFVFASISGYQNVGAATTIAVLVASQLVGGLIMDLVRAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GVPVRALIGPLCGAVMLVVGAWLVARRQF
CCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]