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The map label for this gene is ydcE [H]

Identifier: 238894932

GI number: 238894932

Start: 2822168

End: 2822434

Strand: Reverse

Name: ydcE [H]

Synonym: KP1_2955

Alternate gene names: 238894932

Gene position: 2822434-2822168 (Counterclockwise)

Preceding gene: 238894933

Following gene: 238894930

Centisome position: 53.78

GC content: 55.06

Gene sequence:

>267_bases
GTGGTAGCGTTATGGCTCTCATCACAAGGAGTCTTTGCTATGCCGCATGTTGATATTAAATGTTTTCCCCGTGAACTGAC
TGATGAACAAAAAACCGCGCTGGCCGCCGACATCACTGAGGTGCTGATCCGCCATCTGAACAGCAAAGAGAGCGCCGTCA
GCGTCGCACTCACTCAGGTTGAGCCGGACGCGTGGCAGGCGGTGTGGGACAGTGAGATCGCCCCGCAGATGGCGCAGTTG
ATTAAGCAGCCGGGTTATAGCATGTAG

Upstream 100 bases:

>100_bases
GCCATCGCCCGGGCGGTCTGTCAGCGACCGGAGCTGGCCGCGGCGCTACGCCGTAACAAGCTGATTTAACGCACGCGATG
CCAACCAGAACGGCCATTCT

Downstream 100 bases:

>100_bases
TTGCCACTGGCGGGCATGATGCCCGCCAGTGACACTCGGTCAGAACCAAATCTCCGTCTGCACGCCGAAGTTCCATGTCC
CACCGGCGGTAAAGCCTTTG

Product: 4-oxalocrotonate tautomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MVALWLSSQGVFAMPHVDIKCFPRELTDEQKTALAADITEVLIRHLNSKESAVSVALTQVEPDAWQAVWDSEIAPQMAQL
IKQPGYSM

Sequences:

>Translated_88_residues
MVALWLSSQGVFAMPHVDIKCFPRELTDEQKTALAADITEVLIRHLNSKESAVSVALTQVEPDAWQAVWDSEIAPQMAQL
IKQPGYSM
>Mature_88_residues
MVALWLSSQGVFAMPHVDIKCFPRELTDEQKTALAADITEVLIRHLNSKESAVSVALTQVEPDAWQAVWDSEIAPQMAQL
IKQPGYSM

Specific function: Unknown

COG id: COG1942

COG function: function code R; Uncharacterized protein, 4-oxalocrotonate tautomerase homolog

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-oxalocrotonate tautomerase family. PptA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787734, Length=75, Percent_Identity=72, Blast_Score=127, Evalue=1e-31,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004370
- InterPro:   IPR014347
- InterPro:   IPR017284 [H]

Pfam domain/function: PF01361 Tautomerase [H]

EC number: 5.3.2.- [C]

Molecular weight: Translated: 9782; Mature: 9782

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVALWLSSQGVFAMPHVDIKCFPRELTDEQKTALAADITEVLIRHLNSKESAVSVALTQV
CEEEEECCCCEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHEEHHCCC
EPDAWQAVWDSEIAPQMAQLIKQPGYSM
CCHHHHHHHCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MVALWLSSQGVFAMPHVDIKCFPRELTDEQKTALAADITEVLIRHLNSKESAVSVALTQV
CEEEEECCCCEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHEEHHCCC
EPDAWQAVWDSEIAPQMAQLIKQPGYSM
CCHHHHHHHCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA