| Definition | Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome. |
|---|---|
| Accession | NC_012731 |
| Length | 5,248,520 |
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The map label for this gene is yhxD [H]
Identifier: 238894885
GI number: 238894885
Start: 2770501
End: 2771421
Strand: Direct
Name: yhxD [H]
Synonym: KP1_2904
Alternate gene names: 238894885
Gene position: 2770501-2771421 (Clockwise)
Preceding gene: 238894879
Following gene: 238894886
Centisome position: 52.79
GC content: 59.5
Gene sequence:
>921_bases ATGACTATGCAAGATGAAAAACCGCCAATGAAGAAGTTACCCACCTCCATGTTGCCAGAAGAGACGGCTCCACGTCCGGA GTTCCCGGAGCAAGAACAAACCCCGCCGGGTCTGGATGCGGAAATGGAGCCATCCCCGGACCACGGTGAAACCAGCTACA CCGGCTCCGGGCGACTGGCCGGTAAGAAAGCGTTAATTACCGGCGGCGACTCCGGTATTGGCCGTGCGGTGGCGATCGCC TTTGCCCGCGAAGGCGCCGACGTCGCGATAAACTATCTGCCCGAAGAGCAAAAGGATGCGGATGAAGTTATCGCCCTGAT CAAAGCCGAAGGGCGCACCGCGGTGGCCCTCCCGGGTGATATTCGCTCCGAATCCTTCTGCCAGTCGCTGGTGGCCGACG CGGTGGAACAGCTGGGAGGTCTGAGCATCCTGGTTAATAACGCCGGGCGTCAGCAATACTGTGAAACCCTTGAGGAACTC ACTACCGAAGATTTCGACGCTACCTTCAAAACCAACGTCTACGCGCCGTTCTGGATCACCCGCGCCGCACTGCCTCACCT CCAGGCCGGAAGCGCGATTATCAATACCACCTCGGTGCAGGCGTATAAACCCAGCCCGATCCTGCTCGATTATGCGCAGA CCAAAGCCTGTCTCGCGATCTTCACTAAATCGCTGGCTAAACAGGTGGCGAAACGAGGCATTCGCGTGAACGCCGTAGCG CCTGGCCCTTACTGGACGGTGCTGCAATCCAGCGGCGGCCAGCCGGACGAGAAGGTGAAACAGTTTGGCAAAGACACGCC GATGGGGCGCCCGGGGCAACCGGTAGAGATCGCCCCGCTGTATGTCACCCTGGCTTCCGATGCCTGCTCATATACCTCCG GACAGGTGTGGTGTTCTGACGGCGGGGATGGTGTGGTCTAA
Upstream 100 bases:
>100_bases CCTACGGTTGGCCATTGACTGCGATGTTGCGAGTCATCCAGGGTCTGTCGCCAGGAGAAGCTGACCTATTCTTAGAGCTG GCCCGTTCTGTCTGAAGGAG
Downstream 100 bases:
>100_bases GCCTCCCGGCATACCGACGCGCGCCAGCGCGCGCCGGTATTTTCCCGGCCAACCCTTGCGGCTATATACTGGCCCCTCGC CTCCCGGTTGCGGCAATTTT
Product: putative oxidoreductase
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTMQDEKPPMKKLPTSMLPEETAPRPEFPEQEQTPPGLDAEMEPSPDHGETSYTGSGRLAGKKALITGGDSGIGRAVAIA FAREGADVAINYLPEEQKDADEVIALIKAEGRTAVALPGDIRSESFCQSLVADAVEQLGGLSILVNNAGRQQYCETLEEL TTEDFDATFKTNVYAPFWITRAALPHLQAGSAIINTTSVQAYKPSPILLDYAQTKACLAIFTKSLAKQVAKRGIRVNAVA PGPYWTVLQSSGGQPDEKVKQFGKDTPMGRPGQPVEIAPLYVTLASDACSYTSGQVWCSDGGDGVV
Sequences:
>Translated_306_residues MTMQDEKPPMKKLPTSMLPEETAPRPEFPEQEQTPPGLDAEMEPSPDHGETSYTGSGRLAGKKALITGGDSGIGRAVAIA FAREGADVAINYLPEEQKDADEVIALIKAEGRTAVALPGDIRSESFCQSLVADAVEQLGGLSILVNNAGRQQYCETLEEL TTEDFDATFKTNVYAPFWITRAALPHLQAGSAIINTTSVQAYKPSPILLDYAQTKACLAIFTKSLAKQVAKRGIRVNAVA PGPYWTVLQSSGGQPDEKVKQFGKDTPMGRPGQPVEIAPLYVTLASDACSYTSGQVWCSDGGDGVV >Mature_305_residues TMQDEKPPMKKLPTSMLPEETAPRPEFPEQEQTPPGLDAEMEPSPDHGETSYTGSGRLAGKKALITGGDSGIGRAVAIAF AREGADVAINYLPEEQKDADEVIALIKAEGRTAVALPGDIRSESFCQSLVADAVEQLGGLSILVNNAGRQQYCETLEELT TEDFDATFKTNVYAPFWITRAALPHLQAGSAIINTTSVQAYKPSPILLDYAQTKACLAIFTKSLAKQVAKRGIRVNAVAP GPYWTVLQSSGGQPDEKVKQFGKDTPMGRPGQPVEIAPLYVTLASDACSYTSGQVWCSDGGDGVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=268, Percent_Identity=31.3432835820896, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI5031737, Length=240, Percent_Identity=30, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI40254992, Length=241, Percent_Identity=31.5352697095436, Blast_Score=98, Evalue=8e-21, Organism=Homo sapiens, GI19923817, Length=258, Percent_Identity=29.4573643410853, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI126723191, Length=205, Percent_Identity=31.219512195122, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI33667109, Length=187, Percent_Identity=32.620320855615, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI10190704, Length=250, Percent_Identity=30, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI126723750, Length=249, Percent_Identity=28.1124497991968, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI59889578, Length=229, Percent_Identity=28.82096069869, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI4504505, Length=246, Percent_Identity=28.8617886178862, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI15277342, Length=252, Percent_Identity=29.7619047619048, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI66933014, Length=253, Percent_Identity=34.3873517786561, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI4758504, Length=255, Percent_Identity=29.4117647058824, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI7705925, Length=256, Percent_Identity=28.515625, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI302344755, Length=108, Percent_Identity=35.1851851851852, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI210032110, Length=188, Percent_Identity=27.6595744680851, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI40254986, Length=199, Percent_Identity=29.1457286432161, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1789378, Length=277, Percent_Identity=56.3176895306859, Blast_Score=315, Evalue=2e-87, Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=38.3673469387755, Blast_Score=135, Evalue=4e-33, Organism=Escherichia coli, GI87082100, Length=256, Percent_Identity=34.765625, Blast_Score=125, Evalue=4e-30, Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=31.8548387096774, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI87082160, Length=246, Percent_Identity=31.7073170731707, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=33.2, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1790717, Length=246, Percent_Identity=28.4552845528455, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI2367365, Length=249, Percent_Identity=32.9317269076305, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=31.2757201646091, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787335, Length=244, Percent_Identity=31.9672131147541, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1786812, Length=257, Percent_Identity=30.3501945525292, Blast_Score=88, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17561402, Length=251, Percent_Identity=36.2549800796813, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17562904, Length=263, Percent_Identity=33.0798479087452, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI193204405, Length=264, Percent_Identity=32.1969696969697, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=31.1787072243346, Blast_Score=114, Evalue=7e-26, Organism=Caenorhabditis elegans, GI17531453, Length=276, Percent_Identity=32.9710144927536, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71994604, Length=260, Percent_Identity=33.4615384615385, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=30.1587301587302, Blast_Score=109, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17562906, Length=267, Percent_Identity=31.4606741573034, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17560220, Length=267, Percent_Identity=34.0823970037453, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17538480, Length=268, Percent_Identity=33.955223880597, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17563726, Length=264, Percent_Identity=31.8181818181818, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17560150, Length=266, Percent_Identity=33.0827067669173, Blast_Score=103, Evalue=8e-23, Organism=Caenorhabditis elegans, GI25147288, Length=251, Percent_Identity=33.8645418326693, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI72000259, Length=265, Percent_Identity=31.3207547169811, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17560676, Length=250, Percent_Identity=30.8, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17562910, Length=268, Percent_Identity=33.5820895522388, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17551412, Length=268, Percent_Identity=33.2089552238806, Blast_Score=101, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=30.5660377358491, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17544670, Length=261, Percent_Identity=28.3524904214559, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17562990, Length=266, Percent_Identity=32.3308270676692, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17536025, Length=259, Percent_Identity=31.6602316602317, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=32.089552238806, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17536651, Length=262, Percent_Identity=30.9160305343511, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17508651, Length=253, Percent_Identity=29.6442687747036, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17538486, Length=273, Percent_Identity=28.2051282051282, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17568967, Length=193, Percent_Identity=31.0880829015544, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI115534694, Length=249, Percent_Identity=28.5140562248996, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17561272, Length=257, Percent_Identity=31.9066147859922, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17555706, Length=261, Percent_Identity=30.2681992337165, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17565030, Length=267, Percent_Identity=30.3370786516854, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71982365, Length=225, Percent_Identity=28, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17538182, Length=257, Percent_Identity=30.7392996108949, Blast_Score=71, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6323882, Length=218, Percent_Identity=30.2752293577982, Blast_Score=80, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6322861, Length=196, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24644339, Length=251, Percent_Identity=35.8565737051793, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=33.0645161290323, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI28571526, Length=248, Percent_Identity=33.8709677419355, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI21355319, Length=247, Percent_Identity=30.3643724696356, Blast_Score=104, Evalue=6e-23, Organism=Drosophila melanogaster, GI24639444, Length=257, Percent_Identity=34.6303501945525, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24643142, Length=248, Percent_Identity=31.8548387096774, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24644337, Length=254, Percent_Identity=33.0708661417323, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI17737361, Length=232, Percent_Identity=30.1724137931034, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI21357673, Length=198, Percent_Identity=28.7878787878788, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI18859837, Length=248, Percent_Identity=26.6129032258064, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI161076933, Length=212, Percent_Identity=29.2452830188679, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24584748, Length=212, Percent_Identity=29.2452830188679, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 32650; Mature: 32519
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMQDEKPPMKKLPTSMLPEETAPRPEFPEQEQTPPGLDAEMEPSPDHGETSYTGSGRLA CCCCCCCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEQKDADEVIALIKAEGRTAVALPGD CCEEEEECCCCCCCHHEEEEEHHCCCCEEEEECCCCCCCHHHHHHHEECCCCEEEECCCC IRSESFCQSLVADAVEQLGGLSILVNNAGRQQYCETLEELTTEDFDATFKTNVYAPFWIT CCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHH RAALPHLQAGSAIINTTSVQAYKPSPILLDYAQTKACLAIFTKSLAKQVAKRGIRVNAVA HHHCCCCCCCCEEEEECEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC PGPYWTVLQSSGGQPDEKVKQFGKDTPMGRPGQPVEIAPLYVTLASDACSYTSGQVWCSD CCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEECC GGDGVV CCCCCC >Mature Secondary Structure TMQDEKPPMKKLPTSMLPEETAPRPEFPEQEQTPPGLDAEMEPSPDHGETSYTGSGRLA CCCCCCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEQKDADEVIALIKAEGRTAVALPGD CCEEEEECCCCCCCHHEEEEEHHCCCCEEEEECCCCCCCHHHHHHHEECCCCEEEECCCC IRSESFCQSLVADAVEQLGGLSILVNNAGRQQYCETLEELTTEDFDATFKTNVYAPFWIT CCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHH RAALPHLQAGSAIINTTSVQAYKPSPILLDYAQTKACLAIFTKSLAKQVAKRGIRVNAVA HHHCCCCCCCCEEEEECEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC PGPYWTVLQSSGGQPDEKVKQFGKDTPMGRPGQPVEIAPLYVTLASDACSYTSGQVWCSD CCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEECC GGDGVV CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 8196543 [H]