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The map label for this gene is ydeI [H]

Identifier: 238894876

GI number: 238894876

Start: 2763873

End: 2764277

Strand: Reverse

Name: ydeI [H]

Synonym: KP1_2894

Alternate gene names: 238894876

Gene position: 2764277-2763873 (Counterclockwise)

Preceding gene: 238894880

Following gene: 238894875

Centisome position: 52.67

GC content: 56.79

Gene sequence:

>405_bases
ATGAAAAAACTAGCATTGGCCATGGCATGTCTGTTTGCCGTAGGTGTCGCGCAGGCGGACGATAAGGGAGGGTTTAGCCA
GAATGCCGCGCCGCCGCCGCCGCACAAACTCGATGACGGCTATCGCGGCGTCGAGGATGGCCGGATCATGACCGTTGAGC
AGGCGAAAACCATGCACGATGGCGCGACCGTTTCGCTGCGCGGCAATCTGCTCAAGCGGCAGGGAGATGACCGTTATCAG
TTTCGTGATAAAAGCGGCACCATCACCGTTATTATCCCGGTCGCCGCGTTTAACGAACAACACGTAGAGCCAGACGATCT
GGTCAATATCAACGGCAGTCTGGATCGCAAAATGACGCCGCCGGTCGTGCGAATCGATCGTCTGCTCAAGCAGTCGCCTA
AGTAA

Upstream 100 bases:

>100_bases
GGACATTCTTATATTAGACGATATCAGAACAATTGACTTTGTAAAAATGGCCAGCCTCAGCCAGGCTTTATTCTCATCGT
CAGCAAAAAACGGAGGCATG

Downstream 100 bases:

>100_bases
GCGGAGCACGTCGATATGAGCACCTTTTCTCACTCGCAAGACGAAGAGCGCGGTAAGCAACCTGCCCGTGAGGCGCCCGG
GGAGCAGGGCGAAGTTCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKKLALAMACLFAVGVAQADDKGGFSQNAAPPPPHKLDDGYRGVEDGRIMTVEQAKTMHDGATVSLRGNLLKRQGDDRYQ
FRDKSGTITVIIPVAAFNEQHVEPDDLVNINGSLDRKMTPPVVRIDRLLKQSPK

Sequences:

>Translated_134_residues
MKKLALAMACLFAVGVAQADDKGGFSQNAAPPPPHKLDDGYRGVEDGRIMTVEQAKTMHDGATVSLRGNLLKRQGDDRYQ
FRDKSGTITVIIPVAAFNEQHVEPDDLVNINGSLDRKMTPPVVRIDRLLKQSPK
>Mature_134_residues
MKKLALAMACLFAVGVAQADDKGGFSQNAAPPPPHKLDDGYRGVEDGRIMTVEQAKTMHDGATVSLRGNLLKRQGDDRYQ
FRDKSGTITVIIPVAAFNEQHVEPDDLVNINGSLDRKMTPPVVRIDRLLKQSPK

Specific function: Unknown

COG id: COG3111

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787817, Length=130, Percent_Identity=56.9230769230769, Blast_Score=160, Evalue=2e-41,
Organism=Escherichia coli, GI1789401, Length=134, Percent_Identity=35.0746268656716, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016052
- InterPro:   IPR005220 [H]

Pfam domain/function: PF04076 BOF [H]

EC number: NA

Molecular weight: Translated: 14682; Mature: 14682

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLALAMACLFAVGVAQADDKGGFSQNAAPPPPHKLDDGYRGVEDGRIMTVEQAKTMHD
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCC
GATVSLRGNLLKRQGDDRYQFRDKSGTITVIIPVAAFNEQHVEPDDLVNINGSLDRKMTP
CCEEEEECCCHHCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCC
PVVRIDRLLKQSPK
HHHHHHHHHHCCCC
>Mature Secondary Structure
MKKLALAMACLFAVGVAQADDKGGFSQNAAPPPPHKLDDGYRGVEDGRIMTVEQAKTMHD
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCC
GATVSLRGNLLKRQGDDRYQFRDKSGTITVIIPVAAFNEQHVEPDDLVNINGSLDRKMTP
CCEEEEECCCHHCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCC
PVVRIDRLLKQSPK
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8383113; 9097039; 9278503 [H]