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The map label for this gene is pqqD [H]

Identifier: 238894847

GI number: 238894847

Start: 2731095

End: 2731373

Strand: Direct

Name: pqqD [H]

Synonym: KP1_2863

Alternate gene names: 238894847

Gene position: 2731095-2731373 (Clockwise)

Preceding gene: 238894846

Following gene: 238894848

Centisome position: 52.04

GC content: 59.5

Gene sequence:

>279_bases
ATGCAAAAAACGTCCATCGTTGCCTTTCGTCGCGGCTACCGACTGCAGTGGGAAGCCGCCCAGGAGAGCCATGTGATCCT
CTATCCGGAGGGTATGGCCAAACTCAATGAGACCGCCGCGGCGATCCTCGAGCTGGTCGATGGCCGGCGCGACGTCGCGG
CGATTATCGCCATGCTTAATGAACGTTTCCCGGAAGCCGGCGGCGTCGATGACGACGTCATCGAGTTCCTGCAGATCGCC
TGTCAACAGAAGTGGATCACCTGCCGTGAGCCAGAGTAA

Upstream 100 bases:

>100_bases
CGATGCTCGATGCCATGACCATGGCCTATGCCCTGCAGCGCCCGCCCTATCACACGGTCACCGACAAGGCGGCCTGGCAC
ACGACCCGACTGGTGTAATC

Downstream 100 bases:

>100_bases
ACCCACCGTCAATCCGCCACTGTGGCTGCTGGCGGAGCTGACCTACCGCTGCCCGCTGCAGTGTCCCTACTGTTCCAATC
CGCTGGACTTCGCCCGGCAG

Product: pyrroloquinoline quinone synthesis protein D

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein D [H]

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MQKTSIVAFRRGYRLQWEAAQESHVILYPEGMAKLNETAAAILELVDGRRDVAAIIAMLNERFPEAGGVDDDVIEFLQIA
CQQKWITCREPE

Sequences:

>Translated_92_residues
MQKTSIVAFRRGYRLQWEAAQESHVILYPEGMAKLNETAAAILELVDGRRDVAAIIAMLNERFPEAGGVDDDVIEFLQIA
CQQKWITCREPE
>Mature_92_residues
MQKTSIVAFRRGYRLQWEAAQESHVILYPEGMAKLNETAAAILELVDGRRDVAAIIAMLNERFPEAGGVDDDVIEFLQIA
CQQKWITCREPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008792
- InterPro:   IPR022479 [H]

Pfam domain/function: PF05402 PqqD [H]

EC number: NA

Molecular weight: Translated: 10436; Mature: 10436

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKTSIVAFRRGYRLQWEAAQESHVILYPEGMAKLNETAAAILELVDGRRDVAAIIAMLN
CCCCHHHHECCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ERFPEAGGVDDDVIEFLQIACQQKWITCREPE
HHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQKTSIVAFRRGYRLQWEAAQESHVILYPEGMAKLNETAAAILELVDGRRDVAAIIAMLN
CCCCHHHHECCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ERFPEAGGVDDDVIEFLQIACQQKWITCREPE
HHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA