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The map label for this gene is ydeE [H]

Identifier: 238894651

GI number: 238894651

Start: 2542982

End: 2544178

Strand: Reverse

Name: ydeE [H]

Synonym: KP1_2655

Alternate gene names: 238894651

Gene position: 2544178-2542982 (Counterclockwise)

Preceding gene: 238894653

Following gene: 238894650

Centisome position: 48.47

GC content: 61.24

Gene sequence:

>1197_bases
ATGATCACCACTCTCCGGCGCTCCACCATCGCGCTGCTGGCATCGTCGTTACTGTTGACTATCGGCCGCGGGGCCACACT
GCCGTTTATGACCATCTATCTCACCCGACGCTTTCAGCTGGAGGTGGATGTGATTGGCTATGCCCTGTCGCTGGCGCTGG
TGGTTGGGGTGTTGTTCAGCATGGGTTTTGGCATCCTCGCTGACAGGTTCGATAAAAAGCGCTATATGGTGTGGTCAGTG
CTGGTGTTTATTCTCGGCTTCAGCGCAATACCGCTGGTCAATAACGCCCCCCTGGTGGTGATCTTCTTTGCACTGATCAA
CTGCGCCTACTCGGTCTTTTCCACCGTCCTGAAAGCCTGGTTCGCCGACCGGCTGACGGCAGAGAAAAAAGCGCGCATCT
TCTCGCTGAACTACACCATCCTCAACATCGGCTGGACCGTTGGGCCGCCCATCGGCACCCTGCTGGTAATGCACAGTATC
AATTTGCCGTTCTGGCTGGCGGCCGCCTGCGCCGCCTTTCCGCTGGTGTTTATTCAGCTGTTTCTTCAGCGGGATGGCGC
CGCCGCGGCCCAGCCGGGCGCCGCGCCCTGGTCGCCTTCGGTGTTGCTGCGCGACCGGGCGCTGCTGTGGTTTACCTGCT
CCGGGCTGCTGGCCTCCTTCGTCGGCGGCGCCTTCGCCTCCTGTCTCTCGCAGTATGTGCTGGTGGTCGCCAGCAGCGAT
TTCGCCGAGAAAGTGGTGGCCGTGGTGCTGCCGGTCAACGCCGCGGTGGTGGTTGCTCTGCAGTATGCGGTTGGCCGGCG
GCTGAGCGCGAGAAATATCCGCCCGCTGATGACCTTCGGCACCGTCTGCTTTGTGATCGGCCTTGTGGGCTTTATGTTCT
CTGGCGCCAGCCTGTGGGCGTGGGGGATCTCGGCGGCGATCTTCACCCTCGGGGAAGTGATTTATGCCCCCGGGGAGTAT
ATGCTGATTGACCATATTGCCCCGCCGGGGATGAAGGCCAGCTACTTCTCCGCCCAGTCGCTGGGGTGGCTGGGGGCGGC
ATTCAACCCGATGCTGACGGGGTTGATCCTCACCCATCTGCCGCACTGGTCGCTTTTTGTCATTCTTATCGTGGCGATTG
TCGCCGCCTGGCTGATGATTTTTCGCGGGATCAATGCCCGCCCCTGGCAACCGGATTCTCCGCTGGCCAACGCCTGA

Upstream 100 bases:

>100_bases
AAGTGCGCCCGTCGACCGCGATGACCTGTACAAGGCGTAATGGCCGTGTTATTTGTGATCGAAGACATAAAATTATAACA
ACATGACAGGCAAGGAAATC

Downstream 100 bases:

>100_bases
CGCCAGCTGGCATGCGGCTGTCAGGTTGCTGTCGGGCCGTTGTCGGGTCGCTGTCGTGGTGGCTGGCGGCCCGGTTCACC
ATACTCCATCACAGGTTTAC

Product: putative MFS-type transporter YdeE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MITTLRRSTIALLASSLLLTIGRGATLPFMTIYLTRRFQLEVDVIGYALSLALVVGVLFSMGFGILADRFDKKRYMVWSV
LVFILGFSAIPLVNNAPLVVIFFALINCAYSVFSTVLKAWFADRLTAEKKARIFSLNYTILNIGWTVGPPIGTLLVMHSI
NLPFWLAAACAAFPLVFIQLFLQRDGAAAAQPGAAPWSPSVLLRDRALLWFTCSGLLASFVGGAFASCLSQYVLVVASSD
FAEKVVAVVLPVNAAVVVALQYAVGRRLSARNIRPLMTFGTVCFVIGLVGFMFSGASLWAWGISAAIFTLGEVIYAPGEY
MLIDHIAPPGMKASYFSAQSLGWLGAAFNPMLTGLILTHLPHWSLFVILIVAIVAAWLMIFRGINARPWQPDSPLANA

Sequences:

>Translated_398_residues
MITTLRRSTIALLASSLLLTIGRGATLPFMTIYLTRRFQLEVDVIGYALSLALVVGVLFSMGFGILADRFDKKRYMVWSV
LVFILGFSAIPLVNNAPLVVIFFALINCAYSVFSTVLKAWFADRLTAEKKARIFSLNYTILNIGWTVGPPIGTLLVMHSI
NLPFWLAAACAAFPLVFIQLFLQRDGAAAAQPGAAPWSPSVLLRDRALLWFTCSGLLASFVGGAFASCLSQYVLVVASSD
FAEKVVAVVLPVNAAVVVALQYAVGRRLSARNIRPLMTFGTVCFVIGLVGFMFSGASLWAWGISAAIFTLGEVIYAPGEY
MLIDHIAPPGMKASYFSAQSLGWLGAAFNPMLTGLILTHLPHWSLFVILIVAIVAAWLMIFRGINARPWQPDSPLANA
>Mature_398_residues
MITTLRRSTIALLASSLLLTIGRGATLPFMTIYLTRRFQLEVDVIGYALSLALVVGVLFSMGFGILADRFDKKRYMVWSV
LVFILGFSAIPLVNNAPLVVIFFALINCAYSVFSTVLKAWFADRLTAEKKARIFSLNYTILNIGWTVGPPIGTLLVMHSI
NLPFWLAAACAAFPLVFIQLFLQRDGAAAAQPGAAPWSPSVLLRDRALLWFTCSGLLASFVGGAFASCLSQYVLVVASSD
FAEKVVAVVLPVNAAVVVALQYAVGRRLSARNIRPLMTFGTVCFVIGLVGFMFSGASLWAWGISAAIFTLGEVIYAPGEY
MLIDHIAPPGMKASYFSAQSLGWLGAAFNPMLTGLILTHLPHWSLFVILIVAIVAAWLMIFRGINARPWQPDSPLANA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787815, Length=392, Percent_Identity=71.6836734693878, Blast_Score=556, Evalue=1e-160,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43182; Mature: 43182

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTLRRSTIALLASSLLLTIGRGATLPFMTIYLTRRFQLEVDVIGYALSLALVVGVLFS
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHH
MGFGILADRFDKKRYMVWSVLVFILGFSAIPLVNNAPLVVIFFALINCAYSVFSTVLKAW
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FADRLTAEKKARIFSLNYTILNIGWTVGPPIGTLLVMHSINLPFWLAAACAAFPLVFIQL
HHHHHHHHHHCEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FLQRDGAAAAQPGAAPWSPSVLLRDRALLWFTCSGLLASFVGGAFASCLSQYVLVVASSD
HHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
FAEKVVAVVLPVNAAVVVALQYAVGRRLSARNIRPLMTFGTVCFVIGLVGFMFSGASLWA
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
WGISAAIFTLGEVIYAPGEYMLIDHIAPPGMKASYFSAQSLGWLGAAFNPMLTGLILTHL
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHCHHHCHHHHHHHHHHHHHHHHHHC
PHWSLFVILIVAIVAAWLMIFRGINARPWQPDSPLANA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MITTLRRSTIALLASSLLLTIGRGATLPFMTIYLTRRFQLEVDVIGYALSLALVVGVLFS
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHH
MGFGILADRFDKKRYMVWSVLVFILGFSAIPLVNNAPLVVIFFALINCAYSVFSTVLKAW
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FADRLTAEKKARIFSLNYTILNIGWTVGPPIGTLLVMHSINLPFWLAAACAAFPLVFIQL
HHHHHHHHHHCEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FLQRDGAAAAQPGAAPWSPSVLLRDRALLWFTCSGLLASFVGGAFASCLSQYVLVVASSD
HHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
FAEKVVAVVLPVNAAVVVALQYAVGRRLSARNIRPLMTFGTVCFVIGLVGFMFSGASLWA
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
WGISAAIFTLGEVIYAPGEYMLIDHIAPPGMKASYFSAQSLGWLGAAFNPMLTGLILTHL
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHCHHHCHHHHHHHHHHHHHHHHHHC
PHWSLFVILIVAIVAAWLMIFRGINARPWQPDSPLANA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8383113; 9097039; 9278503 [H]