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The map label for this gene is ynfD [H]

Identifier: 238894603

GI number: 238894603

Start: 2499459

End: 2499770

Strand: Reverse

Name: ynfD [H]

Synonym: KP1_2604

Alternate gene names: 238894603

Gene position: 2499770-2499459 (Counterclockwise)

Preceding gene: 238894605

Following gene: 238894602

Centisome position: 47.63

GC content: 55.45

Gene sequence:

>312_bases
CTGCTATGCTTAAATCTGGATAACATCGATAAGGAGCGTAAGATGAAACTATCCCTCTGCACCGGCGCTGCGCTACTGCT
GTGCTCCACGGCCGTACTGGCGGCTCCCGACTCCTGTGAACGGGTCAAAAGCGACATCCAGCAGAAGATCATCAACAATG
GCGTACCGGAAACCGCCTTCAGCCTGGCCATTGTGCCAAACGATCAGGCAGACCAGCCCGGGGTTCAGGTGGTCGGTCAT
TGCGCCAACGACACCTTCAAAATCACCTATACGCGTAACAGCGACAGTCCCGCCGAAAACGACGCTCAGTAA

Upstream 100 bases:

>100_bases
AGCAGCAGCGCTGCCGGGATCAGCCAATACAATCTTTTCACAGACGATTCCTTTTGTGTACATCCGATCATATTAGCAAA
TACAATTGTTTACACCAGTT

Downstream 100 bases:

>100_bases
GCCCTCTTCGGTTTCAAATGAAAGATCTTATCCCTGCATTGACCAGGGATAAGGTCTACTGGCTACCCATAACGTATTAT
CGCTCACCCCTGCGTCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MLCLNLDNIDKERKMKLSLCTGAALLLCSTAVLAAPDSCERVKSDIQQKIINNGVPETAFSLAIVPNDQADQPGVQVVGH
CANDTFKITYTRNSDSPAENDAQ

Sequences:

>Translated_103_residues
MLCLNLDNIDKERKMKLSLCTGAALLLCSTAVLAAPDSCERVKSDIQQKIINNGVPETAFSLAIVPNDQADQPGVQVVGH
CANDTFKITYTRNSDSPAENDAQ
>Mature_103_residues
MLCLNLDNIDKERKMKLSLCTGAALLLCSTAVLAAPDSCERVKSDIQQKIINNGVPETAFSLAIVPNDQADQPGVQVVGH
CANDTFKITYTRNSDSPAENDAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081940, Length=91, Percent_Identity=64.8351648351648, Blast_Score=100, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010595
- ProDom:   PD336997 [H]

Pfam domain/function: PF06649 DUF1161 [H]

EC number: NA

Molecular weight: Translated: 11079; Mature: 11079

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCLNLDNIDKERKMKLSLCTGAALLLCSTAVLAAPDSCERVKSDIQQKIINNGVPETAF
CEEECCCCCCCCHHEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCE
SLAIVPNDQADQPGVQVVGHCANDTFKITYTRNSDSPAENDAQ
EEEECCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MLCLNLDNIDKERKMKLSLCTGAALLLCSTAVLAAPDSCERVKSDIQQKIINNGVPETAF
CEEECCCCCCCCHHEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCE
SLAIVPNDQADQPGVQVVGHCANDTFKITYTRNSDSPAENDAQ
EEEECCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9868784 [H]