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The map label for this gene is ydgI [H]

Identifier: 238894539

GI number: 238894539

Start: 2436581

End: 2437963

Strand: Reverse

Name: ydgI [H]

Synonym: KP1_2534

Alternate gene names: 238894539

Gene position: 2437963-2436581 (Counterclockwise)

Preceding gene: 238894540

Following gene: 238894538

Centisome position: 46.45

GC content: 60.95

Gene sequence:

>1383_bases
ATGGAAAAGAAACTGGGCCTGAGCGCCCTGACCGCCCTGGTCCTTAGCTCAATGCTCGGCGCTGGCGTATTCAGTTTGCC
GCAAAATATGGCTGCCGTGGCCAGCCCCTCCGCTCTGCTCATTGGCTGGGCCATCACCGGCGTCGGGATCCTGTTTCTCG
CTTTCGCCATGCTGCTGTTGACCCGTATTCGTCCCGACCTCGACGGCGGGATCTTCACCTACGCTCGCGAAGGATTCGGC
GAACTGATCGGCTTCTGCTCCGCCTGGGGATACTGGCTGTGCGCGGTGATCGCCAACGTCTCCTATCTGGTTATCGTCTT
TTCGGCGCTCAGTTTTTTCACCGATACCCCTGAGCTGCGCCTGTTTGGCGATGGTAATACCTGGCAGTCTATCGTTGGCG
CGTCGGTTCTGCTGTGGGTCGTCCACTTTCTGGTCCTGCGCGGTGTCCAGACGGCAGCGGGGATTAACCTGGTGGCCACC
CTCGCCAAGCTTCTGCCGCTGGGCGCCTTCGTCGCGCTCGCCGCCCTGGCCTTTCAGCTGGATACGTTCCGCCTCGATTT
TAGCGGCCTGGCGCTGGGCGTGCCGGTATGGGAGCAGGTCAAAAACACCATGCTGATCACCCTGTGGGTGTTTATCGGCG
TGGAGGGGGCGGTAGTCGTGTCCGCGCGGGCGCGACACAAGCGCGACGTTGGCCGCGCGACGCTGCTGGCGGTGCTGTCG
GCCCTCGCGGTGTATCTGCTGGTCACCCTGCTGTCGCTGGGCGTTGTGCCGCGCAGCGAACTGGCCGAAATGCGTAACCC
GTCGATGGCGGGACTGATGGTCAGGCTGATGGGGTCGTGGGGGGAGATCGTCATTGCCGCCGGGCTGATCGTGTCGGTGT
GCGGCGCTTATCTCAGCTGGACCATCATGGCCGCGGAGGTGCCTTTCCTCGCCGCCACTCATAAAGCCTTCCCGCGCCTG
TTTGCCCGTCAGAATAGCAACAACGCCCCCTCCGCCTCATTGTGGTTGACCAATATCAGCGTTCAGGTATCGCTGGTGCT
GATCTGGCTGACCGGATCGGACTACGGCACGCTGCTGACCATTGCCTCTGAGATGATTCTCGTGCCTTATCTGCTGGTCG
GCGCCTTTCTGCTGAAAATCGCCACTCGCCCGCTGCATAAAGCGGTGGCTATCGGCGCCTGTATTTATGGCATATGGTTA
TTATACGCGTCGGGGCCTGTGCATTTGCTGTTGTCGGTGGTACTTTACGCTCCGGGTCTTCTGGTCTTTTTGTACGCCCG
ACGTACGCACCAGCACGATCGTTCGCTCAAACGCCGCGAAGTGGCGCTAATTGGTTTATTGCTGGTTGCCGCTTTGCCGG
CAACGTGGATGCTGGTGGGGTAA

Upstream 100 bases:

>100_bases
GGACACTCCGTAAAATCCCGCGCCTTAGCGCAATCCTCCATTTTTATGCGATTTCGCAAAATAAATATTCTGGAACAGCC
ATTTTCACCTCGGGAATGCA

Downstream 100 bases:

>100_bases
GCGGTCGCCCTGCCGCAGAACGCATAGGAGATACCCATGGCTGAACAACAGCCCCGCCCGATTCTGATCACAGGAGCAGG
CCGCCGCATCGGCCTCGCTC

Product: putative arginine/ornithine antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPSALLIGWAITGVGILFLAFAMLLLTRIRPDLDGGIFTYAREGFG
ELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPELRLFGDGNTWQSIVGASVLLWVVHFLVLRGVQTAAGINLVAT
LAKLLPLGAFVALAALAFQLDTFRLDFSGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARHKRDVGRATLLAVLS
ALAVYLLVTLLSLGVVPRSELAEMRNPSMAGLMVRLMGSWGEIVIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRL
FARQNSNNAPSASLWLTNISVQVSLVLIWLTGSDYGTLLTIASEMILVPYLLVGAFLLKIATRPLHKAVAIGACIYGIWL
LYASGPVHLLLSVVLYAPGLLVFLYARRTHQHDRSLKRREVALIGLLLVAALPATWMLVG

Sequences:

>Translated_460_residues
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPSALLIGWAITGVGILFLAFAMLLLTRIRPDLDGGIFTYAREGFG
ELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPELRLFGDGNTWQSIVGASVLLWVVHFLVLRGVQTAAGINLVAT
LAKLLPLGAFVALAALAFQLDTFRLDFSGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARHKRDVGRATLLAVLS
ALAVYLLVTLLSLGVVPRSELAEMRNPSMAGLMVRLMGSWGEIVIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRL
FARQNSNNAPSASLWLTNISVQVSLVLIWLTGSDYGTLLTIASEMILVPYLLVGAFLLKIATRPLHKAVAIGACIYGIWL
LYASGPVHLLLSVVLYAPGLLVFLYARRTHQHDRSLKRREVALIGLLLVAALPATWMLVG
>Mature_460_residues
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPSALLIGWAITGVGILFLAFAMLLLTRIRPDLDGGIFTYAREGFG
ELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPELRLFGDGNTWQSIVGASVLLWVVHFLVLRGVQTAAGINLVAT
LAKLLPLGAFVALAALAFQLDTFRLDFSGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARHKRDVGRATLLAVLS
ALAVYLLVTLLSLGVVPRSELAEMRNPSMAGLMVRLMGSWGEIVIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRL
FARQNSNNAPSASLWLTNISVQVSLVLIWLTGSDYGTLLTIASEMILVPYLLVGAFLLKIATRPLHKAVAIGACIYGIWL
LYASGPVHLLLSVVLYAPGLLVFLYARRTHQHDRSLKRREVALIGLLLVAALPATWMLVG

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=460, Percent_Identity=88.4782608695652, Blast_Score=818, Evalue=0.0,
Organism=Escherichia coli, GI2367353, Length=454, Percent_Identity=29.5154185022026, Blast_Score=135, Evalue=6e-33,
Organism=Escherichia coli, GI1786908, Length=422, Percent_Identity=27.2511848341232, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1790575, Length=450, Percent_Identity=22.8888888888889, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004754 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49377; Mature: 49377

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPSALLIGWAITGVGILFLAFAMLLL
CCCCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
TRIRPDLDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPELR
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LFGDGNTWQSIVGASVLLWVVHFLVLRGVQTAAGINLVATLAKLLPLGAFVALAALAFQL
EEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTFRLDFSGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARHKRDVGRATLLAVLS
HHHEEECCCCEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHH
ALAVYLLVTLLSLGVVPRSELAEMRNPSMAGLMVRLMGSWGEIVIAAGLIVSVCGAYLSW
HHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TIMAAEVPFLAATHKAFPRLFARQNSNNAPSASLWLTNISVQVSLVLIWLTGSDYGTLLT
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEEEECCCCHHHHH
IASEMILVPYLLVGAFLLKIATRPLHKAVAIGACIYGIWLLYASGPVHLLLSVVLYAPGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LVFLYARRTHQHDRSLKRREVALIGLLLVAALPATWMLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECC
>Mature Secondary Structure
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPSALLIGWAITGVGILFLAFAMLLL
CCCCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
TRIRPDLDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPELR
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LFGDGNTWQSIVGASVLLWVVHFLVLRGVQTAAGINLVATLAKLLPLGAFVALAALAFQL
EEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTFRLDFSGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARHKRDVGRATLLAVLS
HHHEEECCCCEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHH
ALAVYLLVTLLSLGVVPRSELAEMRNPSMAGLMVRLMGSWGEIVIAAGLIVSVCGAYLSW
HHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TIMAAEVPFLAATHKAFPRLFARQNSNNAPSASLWLTNISVQVSLVLIWLTGSDYGTLLT
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEEEECCCCHHHHH
IASEMILVPYLLVGAFLLKIATRPLHKAVAIGACIYGIWLLYASGPVHLLLSVVLYAPGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LVFLYARRTHQHDRSLKRREVALIGLLLVAALPATWMLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]