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The map label for this gene is ompN [H]

Identifier: 238894464

GI number: 238894464

Start: 2356000

End: 2357124

Strand: Reverse

Name: ompN [H]

Synonym: KP1_2454

Alternate gene names: 238894464

Gene position: 2357124-2356000 (Counterclockwise)

Preceding gene: 238894465

Following gene: 238894463

Centisome position: 44.91

GC content: 52.8

Gene sequence:

>1125_bases
ATGAAAAGAAAAGTACTGGCCCTCGTTATTCCGGCTTTATTAGCCGCCGGTGCCGCGCATGCGGCGGAAATTTATAATAA
AGACGGGAATAAATTAGATCTCTATGGCAAGGTAGATGGTCTGCATTATTTCTCCAGCGACTCGAAAAAAGACGGCGATC
AAACTTATTTACGTTTTGGCTTTAAAGGCGAAACCCAGATCAACGATATGCTTACCGGCTATGGCCAGTGGGAATATAAC
GTTCAGGCCAACAACACCGAGACCTCCAGCGATCAGGCGTGGACCCGTCTGGCATTCGCCGGTATCAAAGTGGGCGATTA
CGGCTCCTTCGACTACGGTCGTAACTACGGCGTGCTGTACGACGTTGAAGGCTGGACCGATATGCTGCCGGAGTTCGGCG
GCGACTCCTACACCTATGCGGATAACTTTATGGCAGGCCGCGCCAACGGCGTCGCAACCTACCGCAACAGCGATTTCTTC
GGTCTGGTGGAGGGTCTGAACTTCGCCCTGCAGTATCAGGGCAAAAACGAAGGCCAGAACGCGCAGGATATCAACGTCGG
CACCAATAACCGCAGCAGCGACAGCGATGTTCGCTTCGACAATGGCGATGGTTTCGGCCTCTCCACTTCCTACGACTTCG
GCATGGGCATCAGCGCGGCGGCAGCTTACACCTCGTCTGACCGTACTAACGATCAGATGACCCAGACCAACGCGCGCGGC
GATAAAGCGGAAGCATGGACCGCCGGCCTGAAGTACGACGCCAACGATATCTACCTGGCGGCCATGTACTCTGAAACCCG
CAATATGACCCCGTACGGCAATGACGGCGTGGCCAATAAAACGCAAAACTTCGAAGTCACCGCGCAGTATCAGTTCGACT
TCGGCCTGCGTCCGGCCATCTCCTACCTGCAGTCCAAAGGCAAAGATCTGTACAATAACGGCCGCTATGCCGATAAAGAT
CTGGTCAAATATATGGACGTTGGCGCGACCTATTACTTCAACCGTAATATGTCCACCTATGTTGATTACAAAATCAACCT
GCTGGATGGTAACGACAAATTCTACGAAGACAACGGTATCTCTACCGATAACATCGTCGCCCTGGGCCTGGTTTACCAGT
TCTGA

Upstream 100 bases:

>100_bases
CGTAACAATTGAGTCTTACCGGATCTCAGACCGCTCCTTTAGCATGAGTTCACTTCCCACCCGGAAGTTAAAACATAAAA
ACAGTTAAAGGAATTTCTTC

Downstream 100 bases:

>100_bases
TGCGCCTGCCCGCCGGTTCCGGCGGGCTTTCCCCCTCCCGCCTCGCTGCAGATAAAACAAAACGCTATATCTCGCGGACT
AAAATAGCCGTCCGTTTAAT

Product: non-specific outer membrane pore protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKRKVLALVIPALLAAGAAHAAEIYNKDGNKLDLYGKVDGLHYFSSDSKKDGDQTYLRFGFKGETQINDMLTGYGQWEYN
VQANNTETSSDQAWTRLAFAGIKVGDYGSFDYGRNYGVLYDVEGWTDMLPEFGGDSYTYADNFMAGRANGVATYRNSDFF
GLVEGLNFALQYQGKNEGQNAQDINVGTNNRSSDSDVRFDNGDGFGLSTSYDFGMGISAAAAYTSSDRTNDQMTQTNARG
DKAEAWTAGLKYDANDIYLAAMYSETRNMTPYGNDGVANKTQNFEVTAQYQFDFGLRPAISYLQSKGKDLYNNGRYADKD
LVKYMDVGATYYFNRNMSTYVDYKINLLDGNDKFYEDNGISTDNIVALGLVYQF

Sequences:

>Translated_374_residues
MKRKVLALVIPALLAAGAAHAAEIYNKDGNKLDLYGKVDGLHYFSSDSKKDGDQTYLRFGFKGETQINDMLTGYGQWEYN
VQANNTETSSDQAWTRLAFAGIKVGDYGSFDYGRNYGVLYDVEGWTDMLPEFGGDSYTYADNFMAGRANGVATYRNSDFF
GLVEGLNFALQYQGKNEGQNAQDINVGTNNRSSDSDVRFDNGDGFGLSTSYDFGMGISAAAAYTSSDRTNDQMTQTNARG
DKAEAWTAGLKYDANDIYLAAMYSETRNMTPYGNDGVANKTQNFEVTAQYQFDFGLRPAISYLQSKGKDLYNNGRYADKD
LVKYMDVGATYYFNRNMSTYVDYKINLLDGNDKFYEDNGISTDNIVALGLVYQF
>Mature_374_residues
MKRKVLALVIPALLAAGAAHAAEIYNKDGNKLDLYGKVDGLHYFSSDSKKDGDQTYLRFGFKGETQINDMLTGYGQWEYN
VQANNTETSSDQAWTRLAFAGIKVGDYGSFDYGRNYGVLYDVEGWTDMLPEFGGDSYTYADNFMAGRANGVATYRNSDFF
GLVEGLNFALQYQGKNEGQNAQDINVGTNNRSSDSDVRFDNGDGFGLSTSYDFGMGISAAAAYTSSDRTNDQMTQTNARG
DKAEAWTAGLKYDANDIYLAAMYSETRNMTPYGNDGVANKTQNFEVTAQYQFDFGLRPAISYLQSKGKDLYNNGRYADKD
LVKYMDVGATYYFNRNMSTYVDYKINLLDGNDKFYEDNGISTDNIVALGLVYQF

Specific function: Non-Specific Porin. [C]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Gram-negative porin family [H]

Homologues:

Organism=Escherichia coli, GI1787641, Length=382, Percent_Identity=78.0104712041885, Blast_Score=550, Evalue=1e-158,
Organism=Escherichia coli, GI1788544, Length=377, Percent_Identity=65.5172413793103, Blast_Score=460, Evalue=1e-131,
Organism=Escherichia coli, GI1786436, Length=375, Percent_Identity=60.5333333333333, Blast_Score=441, Evalue=1e-125,
Organism=Escherichia coli, GI1787160, Length=387, Percent_Identity=59.1731266149871, Blast_Score=411, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001897
- InterPro:   IPR001702 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 41619; Mature: 41619

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKVLALVIPALLAAGAAHAAEIYNKDGNKLDLYGKVDGLHYFSSDSKKDGDQTYLRFG
CCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEECCEEEECCCCCCCCCCEEEEEC
FKGETQINDMLTGYGQWEYNVQANNTETSSDQAWTRLAFAGIKVGDYGSFDYGRNYGVLY
CCCCCCHHHHHCCCCCEEEEEECCCCCCCCCHHHHEEEEEEEEECCCCCCCCCCCCCEEE
DVEGWTDMLPEFGGDSYTYADNFMAGRANGVATYRNSDFFGLVEGLNFALQYQGKNEGQN
ECCCHHHHHHHHCCCCEEECCCCCCCCCCCEEEEECCCCEEECCCCCEEEEECCCCCCCC
AQDINVGTNNRSSDSDVRFDNGDGFGLSTSYDFGMGISAAAAYTSSDRTNDQMTQTNARG
CCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHEEECCCCCCCCHHHHCCCCC
DKAEAWTAGLKYDANDIYLAAMYSETRNMTPYGNDGVANKTQNFEVTAQYQFDFGLRPAI
CCCHHEECCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHH
SYLQSKGKDLYNNGRYADKDLVKYMDVGATYYFNRNMSTYVDYKINLLDGNDKFYEDNGI
HHHHHCCCHHHCCCCCCHHHHHHHHHCCEEEEECCCCCEEEEEEEEEECCCCCEEECCCC
STDNIVALGLVYQF
CCCCEEEEEEEECC
>Mature Secondary Structure
MKRKVLALVIPALLAAGAAHAAEIYNKDGNKLDLYGKVDGLHYFSSDSKKDGDQTYLRFG
CCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEECCEEEECCCCCCCCCCEEEEEC
FKGETQINDMLTGYGQWEYNVQANNTETSSDQAWTRLAFAGIKVGDYGSFDYGRNYGVLY
CCCCCCHHHHHCCCCCEEEEEECCCCCCCCCHHHHEEEEEEEEECCCCCCCCCCCCCEEE
DVEGWTDMLPEFGGDSYTYADNFMAGRANGVATYRNSDFFGLVEGLNFALQYQGKNEGQN
ECCCHHHHHHHHCCCCEEECCCCCCCCCCCEEEEECCCCEEECCCCCEEEEECCCCCCCC
AQDINVGTNNRSSDSDVRFDNGDGFGLSTSYDFGMGISAAAAYTSSDRTNDQMTQTNARG
CCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHEEECCCCCCCCHHHHCCCCC
DKAEAWTAGLKYDANDIYLAAMYSETRNMTPYGNDGVANKTQNFEVTAQYQFDFGLRPAI
CCCHHEECCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHH
SYLQSKGKDLYNNGRYADKDLVKYMDVGATYYFNRNMSTYVDYKINLLDGNDKFYEDNGI
HHHHHCCCHHHCCCCCCHHHHHHHHHCCEEEEECCCCCEEEEEEEEEECCCCCEEECCCC
STDNIVALGLVYQF
CCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]