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The map label for this gene is codB [H]

Identifier: 238894348

GI number: 238894348

Start: 2238297

End: 2239742

Strand: Direct

Name: codB [H]

Synonym: KP1_2330

Alternate gene names: 238894348

Gene position: 2238297-2239742 (Clockwise)

Preceding gene: 238894340

Following gene: 238894355

Centisome position: 42.65

GC content: 54.01

Gene sequence:

>1446_bases
TTGAGTGAGGAACCTATGTCTTCGTTTTCGTCTACAGACGGGCAGTCAAAGAGCAATTATGCTGGAATGAGTGAAAGGCG
GTCGATTGATTACATCCCGGAAAGCGAACGGCATGGACACCCTTTTAGCCAGTTCACCCTTTGGTTTGGCGGCAATCTGC
AAATTACGGCGATTGTCACTGGCGCTTTAGCCGTTGTGCTGGGCGGCGATGTAGTGTGGTCTCTGGTCGGGCTGCTGGTC
GGTCAGATGCTGGGGGCGGCGGTGATGTCTCTGCATGCGCTGCAGGGACCGCGACTGGGACTTCCGCAAATGATCCTTAG
CCGCGCCCAGTTTGGGGTTTTTGGCGCGGTGGTGCCGCTGGTGCTGGTTTGCGTCATGTATATCGGTTTTTCTGCCAGCG
GCACCGTATTGGCCGGGCAGGCAATGGCCAAACTACTGAATATCAGCCACGTAGCCGGGATGCTGATATTCAGTGCGATT
ATTATCGTTATCGCCGTCCTCGGTTATAAGGTGATCCACAAGCTGGGCAAACTGGCGAGTATCGTCGGAATTCTCGCCTT
CGTTTATATGTTCATCACGCTGCTACTTTCGGCCGATCTCAGTGCGCTCGCGCACAATAACCATTTTTCGCTGCCGACGT
TTTTATTAGCCGTATCGCTCTCCTCATCGTGGCAGATCGCTTTTTGCCCCTATGTATCCGACTATTCGCGCTACCTGCCA
CGCGATGTTTCCGCCACGAAAACGTGGTGCTCAGTGTTTTTCGGCACCGTATTTGGTACCCAAACGTCGATGACGCTCGG
GGTTCTGACAGCGGCCATTGCCGGCAGCGCGTTCCCTGGTCATGAGGTGAGCTATCTGGTGGGATTAGGTAAGAGTCAGG
CGATGGCCATGGTTATCTATTTCGCCATCTGTTTTGGTAAAATTACCTTCACTACCCTCAATGCGTACGGCAGCTTTATG
TCGCTGACCACCATTGTTTCCGCCTTCCGCCGGCAAACCGTGCTGTCGCAAAAGTGTCGCATTGCATTCGTGGTGCTGAT
GGTGACGGCTTCCTGCATTATCGCGTTGCTTAGCGAACCCGCTTTCTTAAAGCATTTCACGCATTTTCTTCTGTTTCTGC
TGGCGTTCTTCGTGCCGTGGAGCGCCATCTGTCTGACGGATTATTATCTTATCTCGAAGGGCGCCATCGATATTCCGGCG
CTAAGCGACCCGCAGCAACGCTACGGGTTCTGGAACCTGTACGCGATCACCCTGTTTATCGTCGGTGTGCTTATCCAGTT
GCCGTTCATTGAGAACCCGTTGTTCCATGGTTCGCTCACGTGGATCTTCGCCGGTAACGATGTCTCATGGATAATAGGCT
GGTTTGGCACCGGGGTTCTTTACTACGCGCTGCGCCGCTTTGACCGCCGGTCGCTGCCGGCGCAGAGTCTTTTCCCTTCC
ACCTGA

Upstream 100 bases:

>100_bases
AATATTTTACATATTCGTCACAAAGTGAGAGTGCATGCAAGGCGCTGAGTTGTCAATGCTTGTATATACAAGAACGATTG
AGTGAGGTGATATTAATAAC

Downstream 100 bases:

>100_bases
ATGACAAGGGCGGCGTGAGGGCCGCCCCTGCCGTTGCCTGCCAGCTATTTCCCGTCTTTGCGCCAGGCGTCGGCGGTGAG
GGCTTCCCCGAAGTGGCCGG

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MSEEPMSSFSSTDGQSKSNYAGMSERRSIDYIPESERHGHPFSQFTLWFGGNLQITAIVTGALAVVLGGDVVWSLVGLLV
GQMLGAAVMSLHALQGPRLGLPQMILSRAQFGVFGAVVPLVLVCVMYIGFSASGTVLAGQAMAKLLNISHVAGMLIFSAI
IIVIAVLGYKVIHKLGKLASIVGILAFVYMFITLLLSADLSALAHNNHFSLPTFLLAVSLSSSWQIAFCPYVSDYSRYLP
RDVSATKTWCSVFFGTVFGTQTSMTLGVLTAAIAGSAFPGHEVSYLVGLGKSQAMAMVIYFAICFGKITFTTLNAYGSFM
SLTTIVSAFRRQTVLSQKCRIAFVVLMVTASCIIALLSEPAFLKHFTHFLLFLLAFFVPWSAICLTDYYLISKGAIDIPA
LSDPQQRYGFWNLYAITLFIVGVLIQLPFIENPLFHGSLTWIFAGNDVSWIIGWFGTGVLYYALRRFDRRSLPAQSLFPS
T

Sequences:

>Translated_481_residues
MSEEPMSSFSSTDGQSKSNYAGMSERRSIDYIPESERHGHPFSQFTLWFGGNLQITAIVTGALAVVLGGDVVWSLVGLLV
GQMLGAAVMSLHALQGPRLGLPQMILSRAQFGVFGAVVPLVLVCVMYIGFSASGTVLAGQAMAKLLNISHVAGMLIFSAI
IIVIAVLGYKVIHKLGKLASIVGILAFVYMFITLLLSADLSALAHNNHFSLPTFLLAVSLSSSWQIAFCPYVSDYSRYLP
RDVSATKTWCSVFFGTVFGTQTSMTLGVLTAAIAGSAFPGHEVSYLVGLGKSQAMAMVIYFAICFGKITFTTLNAYGSFM
SLTTIVSAFRRQTVLSQKCRIAFVVLMVTASCIIALLSEPAFLKHFTHFLLFLLAFFVPWSAICLTDYYLISKGAIDIPA
LSDPQQRYGFWNLYAITLFIVGVLIQLPFIENPLFHGSLTWIFAGNDVSWIIGWFGTGVLYYALRRFDRRSLPAQSLFPS
T
>Mature_480_residues
SEEPMSSFSSTDGQSKSNYAGMSERRSIDYIPESERHGHPFSQFTLWFGGNLQITAIVTGALAVVLGGDVVWSLVGLLVG
QMLGAAVMSLHALQGPRLGLPQMILSRAQFGVFGAVVPLVLVCVMYIGFSASGTVLAGQAMAKLLNISHVAGMLIFSAII
IVIAVLGYKVIHKLGKLASIVGILAFVYMFITLLLSADLSALAHNNHFSLPTFLLAVSLSSSWQIAFCPYVSDYSRYLPR
DVSATKTWCSVFFGTVFGTQTSMTLGVLTAAIAGSAFPGHEVSYLVGLGKSQAMAMVIYFAICFGKITFTTLNAYGSFMS
LTTIVSAFRRQTVLSQKCRIAFVVLMVTASCIIALLSEPAFLKHFTHFLLFLLAFFVPWSAICLTDYYLISKGAIDIPAL
SDPQQRYGFWNLYAITLFIVGVLIQLPFIENPLFHGSLTWIFAGNDVSWIIGWFGTGVLYYALRRFDRRSLPAQSLFPST

Specific function: Unknown

COG id: COG1457

COG function: function code F; Purine-cytosine permease and related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the purine-cytosine permease family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320903, Length=398, Percent_Identity=25.1256281407035, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6320897, Length=400, Percent_Identity=23.25, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001248 [H]

Pfam domain/function: PF02133 Transp_cyt_pur [H]

EC number: NA

Molecular weight: Translated: 52392; Mature: 52261

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEPMSSFSSTDGQSKSNYAGMSERRSIDYIPESERHGHPFSQFTLWFGGNLQITAIVT
CCCCCCHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHEEEEECCCEEEEHHHH
GALAVVLGGDVVWSLVGLLVGQMLGAAVMSLHALQGPRLGLPQMILSRAQFGVFGAVVPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
VLVCVMYIGFSASGTVLAGQAMAKLLNISHVAGMLIFSAIIIVIAVLGYKVIHKLGKLAS
HHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVGILAFVYMFITLLLSADLSALAHNNHFSLPTFLLAVSLSSSWQIAFCPYVSDYSRYLP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHCC
RDVSATKTWCSVFFGTVFGTQTSMTLGVLTAAIAGSAFPGHEVSYLVGLGKSQAMAMVIY
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHEECCCHHHHHHHHH
FAICFGKITFTTLNAYGSFMSLTTIVSAFRRQTVLSQKCRIAFVVLMVTASCIIALLSEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AFLKHFTHFLLFLLAFFVPWSAICLTDYYLISKGAIDIPALSDPQQRYGFWNLYAITLFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHH
VGVLIQLPFIENPLFHGSLTWIFAGNDVSWIIGWFGTGVLYYALRRFDRRSLPAQSLFPS
HHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
T
C
>Mature Secondary Structure 
SEEPMSSFSSTDGQSKSNYAGMSERRSIDYIPESERHGHPFSQFTLWFGGNLQITAIVT
CCCCCHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHEEEEECCCEEEEHHHH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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]