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The map label for this gene is yciC [C]

Identifier: 238894302

GI number: 238894302

Start: 2191651

End: 2192394

Strand: Reverse

Name: yciC [C]

Synonym: KP1_2280

Alternate gene names: 238894302

Gene position: 2192394-2191651 (Counterclockwise)

Preceding gene: 238894303

Following gene: 238894301

Centisome position: 41.77

GC content: 58.6

Gene sequence:

>744_bases
ATGTCTATCACGGCGAAGTCCGTCTACCGTGACACCGGGAATTTTTTTCGTAATCAGTTCATTACTATTTTACTGATTGC
GCTGTTGTGCGCGTTTATTACGGTAGTACTTGGCTATGCCTTTTCACCCAGCGACGAGCAGCTGTCGATACTCAGCGAAG
GCGATAACCTCGCCGGTAGCGCCGGGCTTTTCGAGCTGGTGCAGAACATGACGCCGGAGCAGCAGCAGGTTCTGCTGCGC
GCCTCGGCGGCATCAACCTTCTCGGGTCTGGTAGGTAATGCGATCCTCGTCGGCGGCGTCCTGCTGCTGATCCAGCTGAT
CTCCGCCGGTCATCGCGTTAGCGCCCTGCGCGCCATCGGCGCCTCGGCGCCGGTGCTGCCCAAGCTGCTGCTTCTGATCC
TGTTCACCACCTTCCTGGTGCAGATGGGGATGATGCTGGTGCTGGTGCCCGGCGTGCTGCTGGCCATCGTGCTGGCCTTT
GCGCCGATCATGCTGGTACAGGACAAAATGGGCATCCTCGGCGCCATGCGCAGCAGCATGCGCCTGGCGTGGGCCAATCT
GCGGCTGGTGGCGCCGGCTATTATCGGTTGGCTGGTGGCGAAAACCCTGCTGTTACTGTTTGCTTCCAGCTTTGCCGCCC
TGACGCCAAACGTCGGCGCGGTGGTGATTAATACCATCAGCAACCTGATTTCCGCCCTGTTGCTGATCTATTTATTCCGC
GTGTATATGCTTATCCGCAGCTAA

Upstream 100 bases:

>100_bases
AAAGATATACCTGCCCTGACCGGCGCAGAGAGTGCTACGACGGAACGATTTGCGGTACAATCGCCGGCTAGTTAACACCT
GCGACACTCAAGGAGAATGC

Downstream 100 bases:

>100_bases
TTTTAACCAGGACCGGGGCCTTCCCCGGTCCGTCCTGAAAGACGGGATCGATGTATGAAGCAGTTTCTGGATTTTTTACC
GCTGGTGGTCTTCTTTGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSITAKSVYRDTGNFFRNQFITILLIALLCAFITVVLGYAFSPSDEQLSILSEGDNLAGSAGLFELVQNMTPEQQQVLLR
ASAASTFSGLVGNAILVGGVLLLIQLISAGHRVSALRAIGASAPVLPKLLLLILFTTFLVQMGMMLVLVPGVLLAIVLAF
APIMLVQDKMGILGAMRSSMRLAWANLRLVAPAIIGWLVAKTLLLLFASSFAALTPNVGAVVINTISNLISALLLIYLFR
VYMLIRS

Sequences:

>Translated_247_residues
MSITAKSVYRDTGNFFRNQFITILLIALLCAFITVVLGYAFSPSDEQLSILSEGDNLAGSAGLFELVQNMTPEQQQVLLR
ASAASTFSGLVGNAILVGGVLLLIQLISAGHRVSALRAIGASAPVLPKLLLLILFTTFLVQMGMMLVLVPGVLLAIVLAF
APIMLVQDKMGILGAMRSSMRLAWANLRLVAPAIIGWLVAKTLLLLFASSFAALTPNVGAVVINTISNLISALLLIYLFR
VYMLIRS
>Mature_246_residues
SITAKSVYRDTGNFFRNQFITILLIALLCAFITVVLGYAFSPSDEQLSILSEGDNLAGSAGLFELVQNMTPEQQQVLLRA
SAASTFSGLVGNAILVGGVLLLIQLISAGHRVSALRAIGASAPVLPKLLLLILFTTFLVQMGMMLVLVPGVLLAIVLAFA
PIMLVQDKMGILGAMRSSMRLAWANLRLVAPAIIGWLVAKTLLLLFASSFAALTPNVGAVVINTISNLISALLLIYLFRV
YMLIRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0259 family [H]

Homologues:

Organism=Escherichia coli, GI1787508, Length=246, Percent_Identity=76.4227642276423, Blast_Score=374, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009627 [H]

Pfam domain/function: PF06790 UPF0259 [H]

EC number: NA

Molecular weight: Translated: 26391; Mature: 26260

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITAKSVYRDTGNFFRNQFITILLIALLCAFITVVLGYAFSPSDEQLSILSEGDNLAGS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCH
AGLFELVQNMTPEQQQVLLRASAASTFSGLVGNAILVGGVLLLIQLISAGHRVSALRAIG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
ASAPVLPKLLLLILFTTFLVQMGMMLVLVPGVLLAIVLAFAPIMLVQDKMGILGAMRSSM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLAWANLRLVAPAIIGWLVAKTLLLLFASSFAALTPNVGAVVINTISNLISALLLIYLFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
VYMLIRS
HHHHHCC
>Mature Secondary Structure 
SITAKSVYRDTGNFFRNQFITILLIALLCAFITVVLGYAFSPSDEQLSILSEGDNLAGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCH
AGLFELVQNMTPEQQQVLLRASAASTFSGLVGNAILVGGVLLLIQLISAGHRVSALRAIG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
ASAPVLPKLLLLILFTTFLVQMGMMLVLVPGVLLAIVLAFAPIMLVQDKMGILGAMRSSM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLAWANLRLVAPAIIGWLVAKTLLLLFASSFAALTPNVGAVVINTISNLISALLLIYLFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
VYMLIRS
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA