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The map label for this gene is yajD [H]

Identifier: 238894254

GI number: 238894254

Start: 2142799

End: 2143143

Strand: Reverse

Name: yajD [H]

Synonym: KP1_2225

Alternate gene names: 238894254

Gene position: 2143143-2142799 (Counterclockwise)

Preceding gene: 238894255

Following gene: 238894251

Centisome position: 40.83

GC content: 53.62

Gene sequence:

>345_bases
ATGGCCTATATCCCCAAAAATTACGCACGTCTGGAAGTGGGTTACCGCGAAAAGGCGCTCAAGCTTTTTCCCTGGGTGTG
CGGACGCTGCTCACGGGAGTTTGTCTACTCCAATCTGCGCGAGCTGACGGTGCACCACATCGATCACGACCACTCCAATA
ACCCGGAAGATGGCAGCAACTGGGAGATGTTGTGCCTGTACTGTCACGATCACGAACATTCCAAGTACACCGAAGCCGAT
CAGTATGGCTCCACGGTGGTGGCAGGAGAAGATGCGCAAAAGAGCGTCGGCGAGGCCACCTACAACCCGTTTGCCGATCT
GAAAGCGATGATGAACAAAAAGTAA

Upstream 100 bases:

>100_bases
AATGCAGGTATATCGCGCCGCCCGGGATAGGTTATGATGCCTGTTATCCGCTGCGCCAGGGGTTGGCGCAGCTTAACCGT
TTGACAGGAGGCAGGGGGCC

Downstream 100 bases:

>100_bases
GCGAAGCGGCTGACCGCCGGACGCGGTCATTCGACATGACGCCATCCGGCGCGCGGTTACCCGACGCCGGAACGTCTCAC
CGCCGGCCGGCGGTTTATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MAYIPKNYARLEVGYREKALKLFPWVCGRCSREFVYSNLRELTVHHIDHDHSNNPEDGSNWEMLCLYCHDHEHSKYTEAD
QYGSTVVAGEDAQKSVGEATYNPFADLKAMMNKK

Sequences:

>Translated_114_residues
MAYIPKNYARLEVGYREKALKLFPWVCGRCSREFVYSNLRELTVHHIDHDHSNNPEDGSNWEMLCLYCHDHEHSKYTEAD
QYGSTVVAGEDAQKSVGEATYNPFADLKAMMNKK
>Mature_113_residues
AYIPKNYARLEVGYREKALKLFPWVCGRCSREFVYSNLRELTVHHIDHDHSNNPEDGSNWEMLCLYCHDHEHSKYTEADQ
YGSTVVAGEDAQKSVGEATYNPFADLKAMMNKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786611, Length=114, Percent_Identity=91.2280701754386, Blast_Score=229, Evalue=3e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002711
- InterPro:   IPR003615
- InterPro:   IPR015880 [H]

Pfam domain/function: PF01844 HNH [H]

EC number: NA

Molecular weight: Translated: 13203; Mature: 13072

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYIPKNYARLEVGYREKALKLFPWVCGRCSREFVYSNLRELTVHHIDHDHSNNPEDGSN
CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
WEMLCLYCHDHEHSKYTEADQYGSTVVAGEDAQKSVGEATYNPFADLKAMMNKK
EEEEEEEEECCCCCCCCCHHHCCCEEEECCCHHHHHCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
AYIPKNYARLEVGYREKALKLFPWVCGRCSREFVYSNLRELTVHHIDHDHSNNPEDGSN
CCCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
WEMLCLYCHDHEHSKYTEADQYGSTVVAGEDAQKSVGEATYNPFADLKAMMNKK
EEEEEEEEECCCCCCCCCHHHCCCEEEECCCHHHHHCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]