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The map label for this gene is yfdR [H]

Identifier: 238894191

GI number: 238894191

Start: 2093227

End: 2093772

Strand: Reverse

Name: yfdR [H]

Synonym: KP1_2154

Alternate gene names: 238894191

Gene position: 2093772-2093227 (Counterclockwise)

Preceding gene: 238894192

Following gene: 238894190

Centisome position: 39.89

GC content: 52.38

Gene sequence:

>546_bases
TTGGTTTATGGAGAAAAAATGAGATTTATACAAACCATTTCAGGCAAACATTTTAATTATCTCGATATCCAGCAAGACGC
GATCGAGATCGAGGATATTGCCACCGCCCTCTCGCATATCTGCCGATTTGCTGGCCACCTGCCAGAGTTCTACAGCGTTG
GACAGCACAGCGTTTTATCCAGCCGGCTCGTACCACAGGAGTTCGCACTTGAGGCACTTCTCCACGATGCTGCCGAGGCT
TACCTGCAGGATATTCCGGCTCCGCTTAAGCACCTCTTACCTGACTATCGCGCAATGGAGATTCGGGTTGATGCTGCAAT
ACGTCAGAAATTCGGGCTGCCGGCTGAGCAGCACCCGACCGTTAAATATGCCGACCTGGTGATGTTGGCCAGCGAACGTC
GCGACTTTGAGATCGACGACGGCACTGTCTGGCCCATGCTCGAAGGCATTATTCCGACGGATCAATTCGTTATTAATCCG
GTTCGCCCAGGCCAGGCCTATGGGATGTTCATGAACCGCTTCCACCAGTTGATGGAGCGGCGCTAA

Upstream 100 bases:

>100_bases
ATAGAGAGCAAATTCACGCCAAACAACCAGAGTTGATTTGGAATGATCCGTGCGCGGATTATACCGCATTCACAAATAAA
CGCAACAAGCAAGGCGATAT

Downstream 100 bases:

>100_bases
TGGCACATATGAAAGTTAAAGAACTGGTCGCTGCAGCTTACGCTGCCGCACCCGATCTTCCACCGGAAAAAGCAGAGTTA
ATGCGCAATATCGCTTCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MVYGEKMRFIQTISGKHFNYLDIQQDAIEIEDIATALSHICRFAGHLPEFYSVGQHSVLSSRLVPQEFALEALLHDAAEA
YLQDIPAPLKHLLPDYRAMEIRVDAAIRQKFGLPAEQHPTVKYADLVMLASERRDFEIDDGTVWPMLEGIIPTDQFVINP
VRPGQAYGMFMNRFHQLMERR

Sequences:

>Translated_181_residues
MVYGEKMRFIQTISGKHFNYLDIQQDAIEIEDIATALSHICRFAGHLPEFYSVGQHSVLSSRLVPQEFALEALLHDAAEA
YLQDIPAPLKHLLPDYRAMEIRVDAAIRQKFGLPAEQHPTVKYADLVMLASERRDFEIDDGTVWPMLEGIIPTDQFVINP
VRPGQAYGMFMNRFHQLMERR
>Mature_181_residues
MVYGEKMRFIQTISGKHFNYLDIQQDAIEIEDIATALSHICRFAGHLPEFYSVGQHSVLSSRLVPQEFALEALLHDAAEA
YLQDIPAPLKHLLPDYRAMEIRVDAAIRQKFGLPAEQHPTVKYADLVMLASERRDFEIDDGTVWPMLEGIIPTDQFVINP
VRPGQAYGMFMNRFHQLMERR

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082090, Length=175, Percent_Identity=64.5714285714286, Blast_Score=238, Evalue=1e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20799; Mature: 20799

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYGEKMRFIQTISGKHFNYLDIQQDAIEIEDIATALSHICRFAGHLPEFYSVGQHSVLS
CCCCHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHH
SRLVPQEFALEALLHDAAEAYLQDIPAPLKHLLPDYRAMEIRVDAAIRQKFGLPAEQHPT
HHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
VKYADLVMLASERRDFEIDDGTVWPMLEGIIPTDQFVINPVRPGQAYGMFMNRFHQLMER
HHHHHHHHHHHCCCCEECCCCCHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHC
R
C
>Mature Secondary Structure
MVYGEKMRFIQTISGKHFNYLDIQQDAIEIEDIATALSHICRFAGHLPEFYSVGQHSVLS
CCCCHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHH
SRLVPQEFALEALLHDAAEAYLQDIPAPLKHLLPDYRAMEIRVDAAIRQKFGLPAEQHPT
HHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
VKYADLVMLASERRDFEIDDGTVWPMLEGIIPTDQFVINPVRPGQAYGMFMNRFHQLMER
HHHHHHHHHHHCCCCEECCCCCHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]