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The map label for this gene is ymfB [H]

Identifier: 238894183

GI number: 238894183

Start: 2086883

End: 2087341

Strand: Reverse

Name: ymfB [H]

Synonym: KP1_2144

Alternate gene names: 238894183

Gene position: 2087341-2086883 (Counterclockwise)

Preceding gene: 238894184

Following gene: 238894182

Centisome position: 39.77

GC content: 58.39

Gene sequence:

>459_bases
ATGTTTAAACCTCATGTCACCGTTGCCTGCGTGGTTCACGCCCAGGATAAATTTCTCATCGTCGAAGAAACCATTAACGG
CAAAGCGCTGTGGAACCAGCCGGCGGGCCATCTCGAGGCCAATGAAACGCTGCTGCAGGCCGCCGAACGTGAACTGTGGG
AAGAGACCGGCATTCGCGCCACGCCGCAGCATTTCATCCGCATGCATCAGTGGCTGGCTCCCGATAACACCCCGTTTCTG
CGCTTCCTGTTCGCCATCGAACTTAGCGATCTGTGCGCCACTGAACCGCACGACAGCGATATCGATCGCTGCCTGTGGCT
CAGTGCTGAGGAAATTCTTAACGCGCCGAACCTGCGCTCGCCGCTGGTTGCCGAAAGCATTCGCTGCTACCTGCAGGACC
CGCGGCAGCCGCTGTCGCTGATTGGCGCATTTAACTGGCCGTTCACAGGGGGTGAATGA

Upstream 100 bases:

>100_bases
CCCACCCTGCGGCTGATCCGCTACGCCATGGGCGGCTATACCCTCGACGGACTGGCCAACGGCGACTGGCGCAAAGCCGA
ATAACTGAAAAGGAAAAGCG

Downstream 100 bases:

>100_bases
ACGGTGAGCGCGTGCTAGAATACGCCGCCTCGAAGTTCAATGTAGCGAGTATTTCCATGTCAGAAAGCCAGAAAAAAGTG
ATCGTCGGCATGTCCGGCGG

Product: putative NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MFKPHVTVACVVHAQDKFLIVEETINGKALWNQPAGHLEANETLLQAAERELWEETGIRATPQHFIRMHQWLAPDNTPFL
RFLFAIELSDLCATEPHDSDIDRCLWLSAEEILNAPNLRSPLVAESIRCYLQDPRQPLSLIGAFNWPFTGGE

Sequences:

>Translated_152_residues
MFKPHVTVACVVHAQDKFLIVEETINGKALWNQPAGHLEANETLLQAAERELWEETGIRATPQHFIRMHQWLAPDNTPFL
RFLFAIELSDLCATEPHDSDIDRCLWLSAEEILNAPNLRSPLVAESIRCYLQDPRQPLSLIGAFNWPFTGGE
>Mature_152_residues
MFKPHVTVACVVHAQDKFLIVEETINGKALWNQPAGHLEANETLLQAAERELWEETGIRATPQHFIRMHQWLAPDNTPFL
RFLFAIELSDLCATEPHDSDIDRCLWLSAEEILNAPNLRSPLVAESIRCYLQDPRQPLSLIGAFNWPFTGGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1787379, Length=151, Percent_Identity=80.1324503311258, Blast_Score=257, Evalue=3e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 17302; Mature: 17302

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPHVTVACVVHAQDKFLIVEETINGKALWNQPAGHLEANETLLQAAERELWEETGIRA
CCCCCEEEEEEEECCCCEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC
TPQHFIRMHQWLAPDNTPFLRFLFAIELSDLCATEPHDSDIDRCLWLSAEEILNAPNLRS
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHCCCCCCC
PLVAESIRCYLQDPRQPLSLIGAFNWPFTGGE
CHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFKPHVTVACVVHAQDKFLIVEETINGKALWNQPAGHLEANETLLQAAERELWEETGIRA
CCCCCEEEEEEEECCCCEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC
TPQHFIRMHQWLAPDNTPFLRFLFAIELSDLCATEPHDSDIDRCLWLSAEEILNAPNLRS
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHCCCCCCC
PLVAESIRCYLQDPRQPLSLIGAFNWPFTGGE
CHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA