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The map label for this gene is yafM [H]

Identifier: 238894174

GI number: 238894174

Start: 2078087

End: 2078578

Strand: Direct

Name: yafM [H]

Synonym: KP1_2134

Alternate gene names: 238894174

Gene position: 2078087-2078578 (Clockwise)

Preceding gene: 238894173

Following gene: 238894178

Centisome position: 39.59

GC content: 52.24

Gene sequence:

>492_bases
ATGTCTGATTATCGTCGCAGTTATATCCCTGGCGGCTGCTGGTTCTTCACCGTTAATCTGCAAAATCGGCGCAGCGATCT
CCTGACGCGGCATATTGTTCATCTGCGTGCCGCTACAGCGTCTGTTAAAAGCAAAAAACCTTTTCTGATTAACGCCTGGG
TGGTTTTACCAGAGCATATGCACTGCATCTGGACCCTACCTGAGGGGGATACCGATTATTCCGGTCGCTGGCGGGACATT
AAAAAAATGTTTACCCGAGCGCTGGCGCAGCGCCATATCTGGCAGCCGCGATTCTGGGAACATGCCATCCGTAATGAAGA
AGATTACCGGCGGCATATGGATTACGTTTATATCAATCCCGTTAAGCACGGTCATGTCCGTCGGGTGCAGGATTGGCCGT
ATTCGACCTTTCATCGCGATGTGCGCCGGGGATGGTATCCGTCGGATTGGGCGGGTGAGGTAAGCGAATTTGATGCAGGC
GAGAGGCGATAA

Upstream 100 bases:

>100_bases
TCTGAGAGCCGCTTAATATGAACCATCCAACTTTATGGGGTCAGTCCAGCAGCGCCGCCGGGCAAAAGCGATAAGGCTAA
TACTGAGGAGGGAACCTCAC

Downstream 100 bases:

>100_bases
TGCTCGGGTAAGACATTGCCGCCATCGAAACCACAAAGTGCCGGATGGCGGCTTCGCCTTATCCGACCTACGGTCCAGCC
GATGAGCGCGGAACCCGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSDYRRSYIPGGCWFFTVNLQNRRSDLLTRHIVHLRAATASVKSKKPFLINAWVVLPEHMHCIWTLPEGDTDYSGRWRDI
KKMFTRALAQRHIWQPRFWEHAIRNEEDYRRHMDYVYINPVKHGHVRRVQDWPYSTFHRDVRRGWYPSDWAGEVSEFDAG
ERR

Sequences:

>Translated_163_residues
MSDYRRSYIPGGCWFFTVNLQNRRSDLLTRHIVHLRAATASVKSKKPFLINAWVVLPEHMHCIWTLPEGDTDYSGRWRDI
KKMFTRALAQRHIWQPRFWEHAIRNEEDYRRHMDYVYINPVKHGHVRRVQDWPYSTFHRDVRRGWYPSDWAGEVSEFDAG
ERR
>Mature_162_residues
SDYRRSYIPGGCWFFTVNLQNRRSDLLTRHIVHLRAATASVKSKKPFLINAWVVLPEHMHCIWTLPEGDTDYSGRWRDIK
KMFTRALAQRHIWQPRFWEHAIRNEEDYRRHMDYVYINPVKHGHVRRVQDWPYSTFHRDVRRGWYPSDWAGEVSEFDAGE
RR

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0217 [H]

Homologues:

Organism=Escherichia coli, GI1786422, Length=162, Percent_Identity=70.9876543209877, Blast_Score=245, Evalue=9e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19829; Mature: 19697

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDYRRSYIPGGCWFFTVNLQNRRSDLLTRHIVHLRAATASVKSKKPFLINAWVVLPEHM
CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC
HCIWTLPEGDTDYSGRWRDIKKMFTRALAQRHIWQPRFWEHAIRNEEDYRRHMDYVYINP
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCEEEECC
VKHGHVRRVQDWPYSTFHRDVRRGWYPSDWAGEVSEFDAGERR
CCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
SDYRRSYIPGGCWFFTVNLQNRRSDLLTRHIVHLRAATASVKSKKPFLINAWVVLPEHM
CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC
HCIWTLPEGDTDYSGRWRDIKKMFTRALAQRHIWQPRFWEHAIRNEEDYRRHMDYVYINP
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCEEEECC
VKHGHVRRVQDWPYSTFHRDVRRGWYPSDWAGEVSEFDAGERR
CCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7596361; 9278503 [H]