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The map label for this gene is ycfJ [H]

Identifier: 238894143

GI number: 238894143

Start: 2043034

End: 2043612

Strand: Direct

Name: ycfJ [H]

Synonym: KP1_2100

Alternate gene names: 238894143

Gene position: 2043034-2043612 (Clockwise)

Preceding gene: 238894142

Following gene: 238894147

Centisome position: 38.93

GC content: 57.69

Gene sequence:

>579_bases
TTGCAAAATTGTATCAACAGCAACAAAGGAGGAACTCCCGTGAATAAATCTATGTTGGCGGGTATAGGGATAGGCGTGGC
TGCCGCGCTGGGCGTTGCAGCTGTCGCTGGTCTCAACGTGTTGGATCGCGGCCCGCAGTATGCGCAAGTGGTCTCCAGTA
CACCGATTAAAGAAACCGTGAAAACGCCGCGTCAGGAATGCCGCAATGTCACGGTGACTCATCGTCGTCCGGTACAGGAT
GAAAACCGCATCGCCGGTTCGGTGCTGGGCGCGGTGGCGGGCGGGGTGATTGGCCACCAGTTTGGCGGCGGTCACGGACG
CAGCGTGGCGACGGTCGTAGGTGCGCTGGGCGGCGGCTATGCAGGCAACCAGATCCAGGGCGCGATGCAGGACAACGATA
CCTACACCACCACCCAGCAGCGCTGCAAAACGGTGTATGACAAATCCGATAAAATGCTCGGCTACGATGTGACCTATAAG
ATAGGCGATCAGCAGGGGAAAATCCGCATGGATCACGATCCCGGCAGCCAGATCCCGCTGGACAACAACGGCCAGCTGGT
CCTGAACAACAAAATCTAA

Upstream 100 bases:

>100_bases
AACCGCAGAGATCCCGCTCGGAATCCTCTGAATCCCTTTGATTTGCAGCGAATTCTCGCACTTTTCATCCGCTATCTGAT
TTGCGCCCTCCCGGCTCCGG

Downstream 100 bases:

>100_bases
AAACAGATTTGTGTAGTGATTAGCCCCTCAATCGCTCAGGCTGAGGGGCTTTTTTTATCAGAAGGTTAAGGCGTAGTTCA
GACCAAAGGTGCGGCCACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MQNCINSNKGGTPVNKSMLAGIGIGVAAALGVAAVAGLNVLDRGPQYAQVVSSTPIKETVKTPRQECRNVTVTHRRPVQD
ENRIAGSVLGAVAGGVIGHQFGGGHGRSVATVVGALGGGYAGNQIQGAMQDNDTYTTTQQRCKTVYDKSDKMLGYDVTYK
IGDQQGKIRMDHDPGSQIPLDNNGQLVLNNKI

Sequences:

>Translated_192_residues
MQNCINSNKGGTPVNKSMLAGIGIGVAAALGVAAVAGLNVLDRGPQYAQVVSSTPIKETVKTPRQECRNVTVTHRRPVQD
ENRIAGSVLGAVAGGVIGHQFGGGHGRSVATVVGALGGGYAGNQIQGAMQDNDTYTTTQQRCKTVYDKSDKMLGYDVTYK
IGDQQGKIRMDHDPGSQIPLDNNGQLVLNNKI
>Mature_192_residues
MQNCINSNKGGTPVNKSMLAGIGIGVAAALGVAAVAGLNVLDRGPQYAQVVSSTPIKETVKTPRQECRNVTVTHRRPVQD
ENRIAGSVLGAVAGGVIGHQFGGGHGRSVATVVGALGGGYAGNQIQGAMQDNDTYTTTQQRCKTVYDKSDKMLGYDVTYK
IGDQQGKIRMDHDPGSQIPLDNNGQLVLNNKI

Specific function: Unknown

COG id: COG3134

COG function: function code S; Predicted outer membrane lipoprotein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Rickettsia 17 kDa surface antigen [H]

Homologues:

Organism=Escherichia coli, GI1787353, Length=179, Percent_Identity=89.3854748603352, Blast_Score=308, Evalue=2e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 20118; Mature: 20118

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNCINSNKGGTPVNKSMLAGIGIGVAAALGVAAVAGLNVLDRGPQYAQVVSSTPIKETV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHCCCHHHHH
KTPRQECRNVTVTHRRPVQDENRIAGSVLGAVAGGVIGHQFGGGHGRSVATVVGALGGGY
HHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC
AGNQIQGAMQDNDTYTTTQQRCKTVYDKSDKMLGYDVTYKIGDQQGKIRMDHDPGSQIPL
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCEEECCCCCCCCCC
DNNGQLVLNNKI
CCCCEEEECCCC
>Mature Secondary Structure
MQNCINSNKGGTPVNKSMLAGIGIGVAAALGVAAVAGLNVLDRGPQYAQVVSSTPIKETV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHCCCHHHHH
KTPRQECRNVTVTHRRPVQDENRIAGSVLGAVAGGVIGHQFGGGHGRSVATVVGALGGGY
HHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC
AGNQIQGAMQDNDTYTTTQQRCKTVYDKSDKMLGYDVTYKIGDQQGKIRMDHDPGSQIPL
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCEEECCCCCCCCCC
DNNGQLVLNNKI
CCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]