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The map label for this gene is ycaC [H]

Identifier: 238894089

GI number: 238894089

Start: 1989805

End: 1990482

Strand: Reverse

Name: ycaC [H]

Synonym: KP1_2040

Alternate gene names: 238894089

Gene position: 1990482-1989805 (Counterclockwise)

Preceding gene: 238894090

Following gene: 238894083

Centisome position: 37.92

GC content: 60.03

Gene sequence:

>678_bases
ATGTCTACTCCCGCTAACTTTAACGGTGCTCGTCCGGTGATTGATGTTAACGATACCGCAATGCTGTTGATTGACCATCA
GAGCGGTCTGTTCCAGACCGTCGGCGATATGCCGATGCCAGAACTGCGCGCTCGCGCCGCCGCGCTGGCCAAGATGGCGT
CGCTTGCCGGGATCCCGGTGATCACGACCGCCTCCGTGCCGCAGGGGCCGAACGGTCCGCTGATCCCGGAGATTCATGAA
AACGCGCCGCATGCGAAATACATCGCCCGTAAAGGTGAGATTAACGCCTGGGATAACCCGGAATTCGTCGCCGCGGTGAA
AGCGACCGGCCGTAAAACGCTGATTATCGCCGGGACCATCACCAGCGTCTGCATGGCCTTCCCGGCTATCGCCGCTGTCG
CCGACGGTTATAAAGTGTTTGCCGTGATTGACGCTTCCGGCACCTACAGCAAAATGGCGCAGGAGATCACCCTGGCTCGC
GTGGTACAGGCCGGCGTAGTGCCAATGGATACCGCCGCCGTCGCCTCTGAGCTGCAGCGCACCTGGAATCGCCCGGACGC
CGCAGAATGGGCGGAGGTGTACACCAAAGTCTTCCCGGCCTACCAGCTGCTGATCGAAAGCTACAGCAAAGCGCAGGACG
TCGTGAAGAATAACGAACAGCTGGATTCCCAGCGCTAA

Upstream 100 bases:

>100_bases
TGGCCCGTTTGTCATGAATAACAAAACGCAGATCGCAGAAGCTGTACGCGATTTTAACAGCGGCCGCTTTGGCCAAATCT
AACTGATTGAGGTGAATACT

Downstream 100 bases:

>100_bases
AACGCCCGCCCCGCTGAGCCGCAGCGGGGCATTGTTCATTGCGTGAGCGAACGGCAAAGAAAGAAGAAAATATGCTTGAC
CGTTTTAACGCAACTCCCTA

Product: putative cysteine hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSTPANFNGARPVIDVNDTAMLLIDHQSGLFQTVGDMPMPELRARAAALAKMASLAGIPVITTASVPQGPNGPLIPEIHE
NAPHAKYIARKGEINAWDNPEFVAAVKATGRKTLIIAGTITSVCMAFPAIAAVADGYKVFAVIDASGTYSKMAQEITLAR
VVQAGVVPMDTAAVASELQRTWNRPDAAEWAEVYTKVFPAYQLLIESYSKAQDVVKNNEQLDSQR

Sequences:

>Translated_225_residues
MSTPANFNGARPVIDVNDTAMLLIDHQSGLFQTVGDMPMPELRARAAALAKMASLAGIPVITTASVPQGPNGPLIPEIHE
NAPHAKYIARKGEINAWDNPEFVAAVKATGRKTLIIAGTITSVCMAFPAIAAVADGYKVFAVIDASGTYSKMAQEITLAR
VVQAGVVPMDTAAVASELQRTWNRPDAAEWAEVYTKVFPAYQLLIESYSKAQDVVKNNEQLDSQR
>Mature_224_residues
STPANFNGARPVIDVNDTAMLLIDHQSGLFQTVGDMPMPELRARAAALAKMASLAGIPVITTASVPQGPNGPLIPEIHEN
APHAKYIARKGEINAWDNPEFVAAVKATGRKTLIIAGTITSVCMAFPAIAAVADGYKVFAVIDASGTYSKMAQEITLARV
VQAGVVPMDTAAVASELQRTWNRPDAAEWAEVYTKVFPAYQLLIESYSKAQDVVKNNEQLDSQR

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=196, Percent_Identity=45.9183673469388, Blast_Score=182, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 24095; Mature: 23964

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPANFNGARPVIDVNDTAMLLIDHQSGLFQTVGDMPMPELRARAAALAKMASLAGIPV
CCCCCCCCCCCCEEECCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCE
ITTASVPQGPNGPLIPEIHENAPHAKYIARKGEINAWDNPEFVAAVKATGRKTLIIAGTI
EEECCCCCCCCCCCCCHHCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEHHH
TSVCMAFPAIAAVADGYKVFAVIDASGTYSKMAQEITLARVVQAGVVPMDTAAVASELQR
HHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
TWNRPDAAEWAEVYTKVFPAYQLLIESYSKAQDVVKNNEQLDSQR
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC
>Mature Secondary Structure 
STPANFNGARPVIDVNDTAMLLIDHQSGLFQTVGDMPMPELRARAAALAKMASLAGIPV
CCCCCCCCCCCEEECCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCE
ITTASVPQGPNGPLIPEIHENAPHAKYIARKGEINAWDNPEFVAAVKATGRKTLIIAGTI
EEECCCCCCCCCCCCCHHCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEHHH
TSVCMAFPAIAAVADGYKVFAVIDASGTYSKMAQEITLARVVQAGVVPMDTAAVASELQR
HHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
TWNRPDAAEWAEVYTKVFPAYQLLIESYSKAQDVVKNNEQLDSQR
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]