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The map label for this gene is oppA [H]

Identifier: 238894028

GI number: 238894028

Start: 1924940

End: 1926655

Strand: Direct

Name: oppA [H]

Synonym: KP1_1974

Alternate gene names: 238894028

Gene position: 1924940-1926655 (Clockwise)

Preceding gene: 238894025

Following gene: 238894029

Centisome position: 36.68

GC content: 57.28

Gene sequence:

>1716_bases
ATGGCAGTTCTGCGACTAAGTGTGGAAGAGGGGGATTACCCCGTACGTCAAAGGCAAAGGGAAATGACATTACACAAAAA
AAATCACATCACCCGAACACTCCTGGCTGTCAGTATGCTGGCTATGAGCGGCGGGGCGCTGGCGGCGCAGGTGCCGCCGG
GCACCCAGCTGGCGGAAAAGCAGGAGCTGGTCAGAAATAACGGCAGTGAACCGGCGTCACTCGATCCGCATAAAGTCGAG
AGCGATGTTGAATTCAATATCATTAGCGATCTCTTTGAAGGGCTGGTTAACGTGTCGCCAGCGGGAGCGATCCAGCCGCG
ACTGGCGGAACGCTGGGAAAACAAAGACAACCTGTTATGGACCTTTCATTTACGCCCCGGTCTGACCTGGTCCGACGGCA
CGGCCATTACAGCGCAGGATATCGTCTGGAGCTGGCAACGGCTGGTCTCGCCGGCAACAGCCTCCCCCTACGCGAGCTAC
CCTGGCAATATGCATATCGCCAACGCCCGCGAGATTGCCCTCGGGCAAAAGGGACCCGAGACGTTGGGGGTGAAAGCGCT
GAACGACACCACGCTGCAGGTCACTCTGACCCAGCCGAATGCCGCCTTCCTGGCGATGCTGGCGCACCCTTCGCTGGTAC
CGATCGACAAAGTGCTGGTGGAGCGGTATGCCGATAAATGGACCCGACCAGAGCATATCGTCACCAGCGGCCCGTATAAG
CTGTCCCAATGGGTGGTGAATGAGCGGCTGGTGGCTGAACGTAATGCAAAGTACTGGGATAATGCGCATACCGTTATTAA
TAAAGTGACTTACCTGCCAATCTCTTCGGAGGCCGCCGATGTCAACCGCTACAAAGCAGGGGAGATTGATATTGTCTATA
CGGTGCCGATCAATCAGTTTGCGCAGTTGCAGAAAGCCATGGGCGACCAGCTGGACGTTTCGCCGCAGCTGGCGACCTAT
TACTACGAATTCAATACTACCCGGCCGCCGTTTAACGACGCCCGTGTGCGTCGCGCGCTGAATATGGCGCTTGATAAAGA
TATCATTGCCGGAAAAGTGCTTGGCCAGGGCCAGCGCCCGGCCTGGCTGATCGGTCAGCCGGATATCGGCGGCGTGACGC
TGCATAACCCGGACTACGCCAGCTGGCCGCGTGAGAAACGGATTGCCGAGGCGAAAAAACTGCTGGCGCAGGCGGGGTAT
GATGAAAGCCATCCGCTGGTCTTTACCCTGCTCTATAACACCTCTGAGTCGCACCAGCGTATCGCCATTGCCGCCAGCTC
TATGTGGAAGAAAAACCTCGGCGTCGAGGCGAAGCTACAGAACCAGGAGTGGAAGACGATGCTGGATACCATGCATACGC
ATAACTTCGACGCCGTCCGCTACGCGTGGATTGCCGACTACGACGATGCCGCCACCTTCCTCAATACTTTCCGTACCGGG
GATAGCGAGAACACCAGTCAGTACAGCAACCCGGCTTACGACGCGGCGCTGCGCAACGCGGCGCAAGCCTCCGACGTGGC
GACCCGGGGCAAATACTATCAGCAGGCGGAAGATCTGCTGGCGCAGGATGTTCCCGCCATTCCGGTCTATCACTATGTAC
GTACCCATCTGGTGAAACCTTGGGTAGGGGGCTTCACGCCGGATAAGCTGGGGTATTACTACACCAAAGACATGTACATT
AAAAAACACCCATCCGCCAGCGGCGATGGGCGTTGA

Upstream 100 bases:

>100_bases
TGGCATAAAATTCTATATAGATAGGGAAAAGCGATATATTTTCGCTTTTCGCGTCGCTGAGCCGATCGAAATCTTATAGG
TCACTGAAAAATATTGCCTT

Downstream 100 bases:

>100_bases
TTTTCTGTGCAAACTGCCTGAAATTCAGACGAATAACACAAAATTGTTTGTTTTTAAGGCAGTTGATCAAAATGATGCTT
TACAGCATCCGCCGAGGTGT

Product: putative extracellular solute-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 571; Mature: 570

Protein sequence:

>571_residues
MAVLRLSVEEGDYPVRQRQREMTLHKKNHITRTLLAVSMLAMSGGALAAQVPPGTQLAEKQELVRNNGSEPASLDPHKVE
SDVEFNIISDLFEGLVNVSPAGAIQPRLAERWENKDNLLWTFHLRPGLTWSDGTAITAQDIVWSWQRLVSPATASPYASY
PGNMHIANAREIALGQKGPETLGVKALNDTTLQVTLTQPNAAFLAMLAHPSLVPIDKVLVERYADKWTRPEHIVTSGPYK
LSQWVVNERLVAERNAKYWDNAHTVINKVTYLPISSEAADVNRYKAGEIDIVYTVPINQFAQLQKAMGDQLDVSPQLATY
YYEFNTTRPPFNDARVRRALNMALDKDIIAGKVLGQGQRPAWLIGQPDIGGVTLHNPDYASWPREKRIAEAKKLLAQAGY
DESHPLVFTLLYNTSESHQRIAIAASSMWKKNLGVEAKLQNQEWKTMLDTMHTHNFDAVRYAWIADYDDAATFLNTFRTG
DSENTSQYSNPAYDAALRNAAQASDVATRGKYYQQAEDLLAQDVPAIPVYHYVRTHLVKPWVGGFTPDKLGYYYTKDMYI
KKHPSASGDGR

Sequences:

>Translated_571_residues
MAVLRLSVEEGDYPVRQRQREMTLHKKNHITRTLLAVSMLAMSGGALAAQVPPGTQLAEKQELVRNNGSEPASLDPHKVE
SDVEFNIISDLFEGLVNVSPAGAIQPRLAERWENKDNLLWTFHLRPGLTWSDGTAITAQDIVWSWQRLVSPATASPYASY
PGNMHIANAREIALGQKGPETLGVKALNDTTLQVTLTQPNAAFLAMLAHPSLVPIDKVLVERYADKWTRPEHIVTSGPYK
LSQWVVNERLVAERNAKYWDNAHTVINKVTYLPISSEAADVNRYKAGEIDIVYTVPINQFAQLQKAMGDQLDVSPQLATY
YYEFNTTRPPFNDARVRRALNMALDKDIIAGKVLGQGQRPAWLIGQPDIGGVTLHNPDYASWPREKRIAEAKKLLAQAGY
DESHPLVFTLLYNTSESHQRIAIAASSMWKKNLGVEAKLQNQEWKTMLDTMHTHNFDAVRYAWIADYDDAATFLNTFRTG
DSENTSQYSNPAYDAALRNAAQASDVATRGKYYQQAEDLLAQDVPAIPVYHYVRTHLVKPWVGGFTPDKLGYYYTKDMYI
KKHPSASGDGR
>Mature_570_residues
AVLRLSVEEGDYPVRQRQREMTLHKKNHITRTLLAVSMLAMSGGALAAQVPPGTQLAEKQELVRNNGSEPASLDPHKVES
DVEFNIISDLFEGLVNVSPAGAIQPRLAERWENKDNLLWTFHLRPGLTWSDGTAITAQDIVWSWQRLVSPATASPYASYP
GNMHIANAREIALGQKGPETLGVKALNDTTLQVTLTQPNAAFLAMLAHPSLVPIDKVLVERYADKWTRPEHIVTSGPYKL
SQWVVNERLVAERNAKYWDNAHTVINKVTYLPISSEAADVNRYKAGEIDIVYTVPINQFAQLQKAMGDQLDVSPQLATYY
YEFNTTRPPFNDARVRRALNMALDKDIIAGKVLGQGQRPAWLIGQPDIGGVTLHNPDYASWPREKRIAEAKKLLAQAGYD
ESHPLVFTLLYNTSESHQRIAIAASSMWKKNLGVEAKLQNQEWKTMLDTMHTHNFDAVRYAWIADYDDAATFLNTFRTGD
SENTSQYSNPAYDAALRNAAQASDVATRGKYYQQAEDLLAQDVPAIPVYHYVRTHLVKPWVGGFTPDKLGYYYTKDMYIK
KHPSASGDGR

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=541, Percent_Identity=53.2347504621072, Blast_Score=565, Evalue=1e-162,
Organism=Escherichia coli, GI87081878, Length=538, Percent_Identity=46.0966542750929, Blast_Score=471, Evalue=1e-134,
Organism=Escherichia coli, GI1789397, Length=535, Percent_Identity=44.8598130841121, Blast_Score=455, Evalue=1e-129,
Organism=Escherichia coli, GI1789966, Length=555, Percent_Identity=26.6666666666667, Blast_Score=135, Evalue=6e-33,
Organism=Escherichia coli, GI1787052, Length=515, Percent_Identity=23.8834951456311, Blast_Score=132, Evalue=7e-32,
Organism=Escherichia coli, GI1787762, Length=525, Percent_Identity=25.3333333333333, Blast_Score=131, Evalue=1e-31,
Organism=Escherichia coli, GI1787551, Length=573, Percent_Identity=22.3385689354276, Blast_Score=102, Evalue=7e-23,
Organism=Escherichia coli, GI1789887, Length=492, Percent_Identity=22.5609756097561, Blast_Score=87, Evalue=4e-18,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 63963; Mature: 63832

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLRLSVEEGDYPVRQRQREMTLHKKNHITRTLLAVSMLAMSGGALAAQVPPGTQLAEK
CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHH
QELVRNNGSEPASLDPHKVESDVEFNIISDLFEGLVNVSPAGAIQPRLAERWENKDNLLW
HHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEE
TFHLRPGLTWSDGTAITAQDIVWSWQRLVSPATASPYASYPGNMHIANAREIALGQKGPE
EEEECCCCEECCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHEECCCCCCH
TLGVKALNDTTLQVTLTQPNAAFLAMLAHPSLVPIDKVLVERYADKWTRPEHIVTSGPYK
HHCEEEECCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHH
LSQWVVNERLVAERNAKYWDNAHTVINKVTYLPISSEAADVNRYKAGEIDIVYTVPINQF
HHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEEECCHHHH
AQLQKAMGDQLDVSPQLATYYYEFNTTRPPFNDARVRRALNMALDKDIIAGKVLGQGQRP
HHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AWLIGQPDIGGVTLHNPDYASWPREKRIAEAKKLLAQAGYDESHPLVFTLLYNTSESHQR
EEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCE
IAIAASSMWKKNLGVEAKLQNQEWKTMLDTMHTHNFDAVRYAWIADYDDAATFLNTFRTG
EEEEHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCC
DSENTSQYSNPAYDAALRNAAQASDVATRGKYYQQAEDLLAQDVPAIPVYHYVRTHLVKP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCH
WVGGFTPDKLGYYYTKDMYIKKHPSASGDGR
HCCCCCCCCCCEEEEECEEEEECCCCCCCCC
>Mature Secondary Structure 
AVLRLSVEEGDYPVRQRQREMTLHKKNHITRTLLAVSMLAMSGGALAAQVPPGTQLAEK
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHH
QELVRNNGSEPASLDPHKVESDVEFNIISDLFEGLVNVSPAGAIQPRLAERWENKDNLLW
HHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEE
TFHLRPGLTWSDGTAITAQDIVWSWQRLVSPATASPYASYPGNMHIANAREIALGQKGPE
EEEECCCCEECCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHEECCCCCCH
TLGVKALNDTTLQVTLTQPNAAFLAMLAHPSLVPIDKVLVERYADKWTRPEHIVTSGPYK
HHCEEEECCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHH
LSQWVVNERLVAERNAKYWDNAHTVINKVTYLPISSEAADVNRYKAGEIDIVYTVPINQF
HHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEEECCHHHH
AQLQKAMGDQLDVSPQLATYYYEFNTTRPPFNDARVRRALNMALDKDIIAGKVLGQGQRP
HHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AWLIGQPDIGGVTLHNPDYASWPREKRIAEAKKLLAQAGYDESHPLVFTLLYNTSESHQR
EEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCE
IAIAASSMWKKNLGVEAKLQNQEWKTMLDTMHTHNFDAVRYAWIADYDDAATFLNTFRTG
EEEEHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCC
DSENTSQYSNPAYDAALRNAAQASDVATRGKYYQQAEDLLAQDVPAIPVYHYVRTHLVKP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCH
WVGGFTPDKLGYYYTKDMYIKKHPSASGDGR
HCCCCCCCCCCEEEEECEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2187863; 9097039; 9278503; 2015910; 9298646; 9600841 [H]