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The map label for this gene is amaB [H]

Identifier: 238893991

GI number: 238893991

Start: 1886121

End: 1887359

Strand: Direct

Name: amaB [H]

Synonym: KP1_1935

Alternate gene names: 238893991

Gene position: 1886121-1887359 (Clockwise)

Preceding gene: 238893990

Following gene: 238893992

Centisome position: 35.94

GC content: 55.37

Gene sequence:

>1239_bases
ATGAGTCATTATCTGCAGATTAACGGCCAACGGCTTATCGATTCCCTGTATGCACTTGGCGAACATGGTGCGCTGCCAGG
CGGCGGCGTATGCCGCCTGGCAGCGACTGCCGAAGATAAAGCCGGCAGGGACTTTGTTGTAGCCCGCATGAAGGCGCTGG
GCCTGAGCGTGTCAATTGATGCTATCGGCAATGTCACCGGCGTTTATCACGGCGAGGAGACGTTGCCGATGGTGATGATG
GGGTCACATATCGATACCGTCGCCACCGGTGGGTTATACGATGGCAACTACGGCGTTATGGCCGGCCTTGAGGTGATTGC
CACCCTCCAGGATGCCGGGATCCGCACCCGACGACCGTTGGCGGTAACCTTCTTTACTAACGAGGAGGGGGTGCGATTTC
AGCCCGATATGATGGGCAGCGTGGTGTTTGCCGGCGAGTATCCGTTGGCGCAGGCGCTCGCGGCAAAAGATCTCGACGGT
ATCACGCTCGATGAAGCGCTGCGTAACATTGGTTATAAAGGCGAACGTCAGCCGGGAGATATGGCGGTAGATAGCTACGT
TGAGCTGCATATCGAACAGGGACCAATTCTTGATAAAGAGCAGATTGATATTGGCGTGGTTACCGGCGTACAGGGTATTT
CGTGGCAGGAATTTACCCTGAGAGGCGTATCGAATCATGCGGGTACTACCCCAATGTCCATGAGACGTGATGCCGGGCTG
GCGGCTGCGAAAATCGCTGTTTTTGCCCGTGAGCTGGCGCTAAGCCTTGGTGGCGATCAAGTAGCTACCGTTGGACATTT
CAGCGTGAAGCCTAATCTAATCAACGTCATTCCCAACCATGTCGTCATGTCAGTGGATCTCCGCAATACCGATAATGCGA
TCTTATGTCTGGCGGAGCAGCAATTGGCCGAATTTGTCACGAAAACGTCGCAGGAAGAGGGCGTGGAGATAACCAGCCGC
TCACTGGTGCGCTTTAATCCGGTCATCTTTGCCGATGAGATCGTCAATGCGGTGGAAGCCGAGGCGGAGCGTCAGGCGCT
CAGTTACCGACGTTTGCCAAGCGGCGCCGGACACGATGCACAATTTATGGCGTCGGTATGTCCCGCCGGGATGATTTTTG
TCCCCTGCGTCGATGGCATTAGCCATAACGTCAAAGAACATAGCGCAGCCAAAGATCTGATTGCTGGCGCCAATGTGCTG
CTGCAGGTGGTTTTACAGCGCGCCCAGCGTATGGACTAA

Upstream 100 bases:

>100_bases
TAAAGCGAGCAACGTTTTCGTCACCCTGATCGGTCTTATCACCGTATCTGCCATTTTTTACGGCATGTTCCAATAACCAC
CATTATTAGCGAGATGTTAT

Downstream 100 bases:

>100_bases
TGTTTACAGGAGCAGAGAATGAATCAGCAACAGCTAAAGCAGCAGCTTATCGCCTGGCGTCACTATTTGCATGCCCATCC
GGAAAGCGCCTTCGAGGAGC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MSHYLQINGQRLIDSLYALGEHGALPGGGVCRLAATAEDKAGRDFVVARMKALGLSVSIDAIGNVTGVYHGEETLPMVMM
GSHIDTVATGGLYDGNYGVMAGLEVIATLQDAGIRTRRPLAVTFFTNEEGVRFQPDMMGSVVFAGEYPLAQALAAKDLDG
ITLDEALRNIGYKGERQPGDMAVDSYVELHIEQGPILDKEQIDIGVVTGVQGISWQEFTLRGVSNHAGTTPMSMRRDAGL
AAAKIAVFARELALSLGGDQVATVGHFSVKPNLINVIPNHVVMSVDLRNTDNAILCLAEQQLAEFVTKTSQEEGVEITSR
SLVRFNPVIFADEIVNAVEAEAERQALSYRRLPSGAGHDAQFMASVCPAGMIFVPCVDGISHNVKEHSAAKDLIAGANVL
LQVVLQRAQRMD

Sequences:

>Translated_412_residues
MSHYLQINGQRLIDSLYALGEHGALPGGGVCRLAATAEDKAGRDFVVARMKALGLSVSIDAIGNVTGVYHGEETLPMVMM
GSHIDTVATGGLYDGNYGVMAGLEVIATLQDAGIRTRRPLAVTFFTNEEGVRFQPDMMGSVVFAGEYPLAQALAAKDLDG
ITLDEALRNIGYKGERQPGDMAVDSYVELHIEQGPILDKEQIDIGVVTGVQGISWQEFTLRGVSNHAGTTPMSMRRDAGL
AAAKIAVFARELALSLGGDQVATVGHFSVKPNLINVIPNHVVMSVDLRNTDNAILCLAEQQLAEFVTKTSQEEGVEITSR
SLVRFNPVIFADEIVNAVEAEAERQALSYRRLPSGAGHDAQFMASVCPAGMIFVPCVDGISHNVKEHSAAKDLIAGANVL
LQVVLQRAQRMD
>Mature_411_residues
SHYLQINGQRLIDSLYALGEHGALPGGGVCRLAATAEDKAGRDFVVARMKALGLSVSIDAIGNVTGVYHGEETLPMVMMG
SHIDTVATGGLYDGNYGVMAGLEVIATLQDAGIRTRRPLAVTFFTNEEGVRFQPDMMGSVVFAGEYPLAQALAAKDLDGI
TLDEALRNIGYKGERQPGDMAVDSYVELHIEQGPILDKEQIDIGVVTGVQGISWQEFTLRGVSNHAGTTPMSMRRDAGLA
AAKIAVFARELALSLGGDQVATVGHFSVKPNLINVIPNHVVMSVDLRNTDNAILCLAEQQLAEFVTKTSQEEGVEITSRS
LVRFNPVIFADEIVNAVEAEAERQALSYRRLPSGAGHDAQFMASVCPAGMIFVPCVDGISHNVKEHSAAKDLIAGANVLL
QVVLQRAQRMD

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=404, Percent_Identity=34.9009900990099, Blast_Score=210, Evalue=1e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44086; Mature: 43955

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHYLQINGQRLIDSLYALGEHGALPGGGVCRLAATAEDKAGRDFVVARMKALGLSVSID
CCCEEEECHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEE
AIGNVTGVYHGEETLPMVMMGSHIDTVATGGLYDGNYGVMAGLEVIATLQDAGIRTRRPL
CCCCEEEEEECCCCCCEEEECCCCCHHCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCE
AVTFFTNEEGVRFQPDMMGSVVFAGEYPLAQALAAKDLDGITLDEALRNIGYKGERQPGD
EEEEEECCCCCEECCCCCCCEEEECCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCC
MAVDSYVELHIEQGPILDKEQIDIGVVTGVQGISWQEFTLRGVSNHAGTTPMSMRRDAGL
HHHCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHEEEEECCCCCCCCCCHHHHCCCH
AAAKIAVFARELALSLGGDQVATVGHFSVKPNLINVIPNHVVMSVDLRNTDNAILCLAEQ
HHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHEECCCEEEEEEEECCCCCEEEEEEHH
QLAEFVTKTSQEEGVEITSRSLVRFNPVIFADEIVNAVEAEAERQALSYRRLPSGAGHDA
HHHHHHHHCCCCCCCEECCCCEEEECCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
QFMASVCPAGMIFVPCVDGISHNVKEHSAAKDLIAGANVLLQVVLQRAQRMD
HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SHYLQINGQRLIDSLYALGEHGALPGGGVCRLAATAEDKAGRDFVVARMKALGLSVSID
CCEEEECHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEE
AIGNVTGVYHGEETLPMVMMGSHIDTVATGGLYDGNYGVMAGLEVIATLQDAGIRTRRPL
CCCCEEEEEECCCCCCEEEECCCCCHHCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCE
AVTFFTNEEGVRFQPDMMGSVVFAGEYPLAQALAAKDLDGITLDEALRNIGYKGERQPGD
EEEEEECCCCCEECCCCCCCEEEECCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCC
MAVDSYVELHIEQGPILDKEQIDIGVVTGVQGISWQEFTLRGVSNHAGTTPMSMRRDAGL
HHHCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHEEEEECCCCCCCCCCHHHHCCCH
AAAKIAVFARELALSLGGDQVATVGHFSVKPNLINVIPNHVVMSVDLRNTDNAILCLAEQ
HHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHEECCCEEEEEEEECCCCCEEEEEEHH
QLAEFVTKTSQEEGVEITSRSLVRFNPVIFADEIVNAVEAEAERQALSYRRLPSGAGHDA
HHHHHHHHCCCCCCCEECCCCEEEECCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
QFMASVCPAGMIFVPCVDGISHNVKEHSAAKDLIAGANVLLQVVLQRAQRMD
HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]