Click here to switch to the map view.

The map label for this gene is ycbJ [H]

Identifier: 238893975

GI number: 238893975

Start: 1865477

End: 1866370

Strand: Direct

Name: ycbJ [H]

Synonym: KP1_1919

Alternate gene names: 238893975

Gene position: 1865477-1866370 (Clockwise)

Preceding gene: 238893974

Following gene: 238893977

Centisome position: 35.54

GC content: 61.41

Gene sequence:

>894_bases
ATGGAACAGTTGCGAACCGAACTCAGTCATCTTCTTGGCGAAAAGCTAAGCCGGGTGGAGTGTGTCAGTGAACAAGCCGC
TACGGCGCTGTGGTTCCTGTACGATGCGCAGGGAAACCCGATGCCGCTGCTGGCGCGAAGTTTCACCACGCCCGGCGTGG
CGCGGCAGCTGGCATGGAAGATCTCGACCCTGGCGCGTAATGGTACGGTGCGTATGCCGGTGGTTTATGGCGTCATGACG
CACGAAGAACATCCCGGACCAGATGTGCTGCTGCTTGAGCGCCTGCGCGGCGTACCGGTGGAGGCGCCGACGCGCACCCC
GGCGCGCTGGGAGCAACTGCAGGAGCAAATCGTCGAGGGGCTGCTGGCGTGGCATCGGCAGGACAGTGGCGGCTGCGTGG
GAATGGTCGACAATACCCAGGAAAACCTGTGGCCGAACTGGTACCGCCAGCGGGTAGAGATATTGTGGAGCACCCTGAAC
CTGTATCAGGACACCGGTCTCACCATGCAGGATAAGCGCCTTTTGTTCCGCTCCCGCGAGTGCCTTCCGGAGCTGTTCCG
CGATTTCAATGATAATGCTGTGCTGGTGCATGGCAACTTCACTCTGCGCAGCATGCTAAAAGATCCGCGCAGCGATCAGC
TGCTGGCGATGGTGGGGCCGGGGATGATGCTGTGGGCGCCACGCGAGTATGAACTGTTCCGCCTTGCTGAAGGCGGCCAG
GCGGAACAGCTGCTGTGGCGCTACCTGCAGCAGGCGCCAGTTTCCGAGGCCTTTGTCTGGCGGCGCTGGCTTTATCTGCT
GTGGGATGAGGTGGATAGTCTGGTCAACACCGGGCGCTTTGATCGCGCCCGTTTTGACCTCGCTGCAAAATCACTCCTGC
CCTGGCTCGCCTGA

Upstream 100 bases:

>100_bases
CGGTTTTTCGCTTTTTTTACCCCTTTTTGATCTTATCCGATGACAAGCCAGGTGCGGGCGCTCATTATGAAACCAGTAGT
GTTCATAGGGGTAATCGACA

Downstream 100 bases:

>100_bases
GCTGCCTTTCAGCCATTGCCAGACGCGACCAAGGGTTTCATAGCCGACCCGGTCGCTGTGCATCAGCCACACTGGAGAAG
GAATGGCCCGCTCCCACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MEQLRTELSHLLGEKLSRVECVSEQAATALWFLYDAQGNPMPLLARSFTTPGVARQLAWKISTLARNGTVRMPVVYGVMT
HEEHPGPDVLLLERLRGVPVEAPTRTPARWEQLQEQIVEGLLAWHRQDSGGCVGMVDNTQENLWPNWYRQRVEILWSTLN
LYQDTGLTMQDKRLLFRSRECLPELFRDFNDNAVLVHGNFTLRSMLKDPRSDQLLAMVGPGMMLWAPREYELFRLAEGGQ
AEQLLWRYLQQAPVSEAFVWRRWLYLLWDEVDSLVNTGRFDRARFDLAAKSLLPWLA

Sequences:

>Translated_297_residues
MEQLRTELSHLLGEKLSRVECVSEQAATALWFLYDAQGNPMPLLARSFTTPGVARQLAWKISTLARNGTVRMPVVYGVMT
HEEHPGPDVLLLERLRGVPVEAPTRTPARWEQLQEQIVEGLLAWHRQDSGGCVGMVDNTQENLWPNWYRQRVEILWSTLN
LYQDTGLTMQDKRLLFRSRECLPELFRDFNDNAVLVHGNFTLRSMLKDPRSDQLLAMVGPGMMLWAPREYELFRLAEGGQ
AEQLLWRYLQQAPVSEAFVWRRWLYLLWDEVDSLVNTGRFDRARFDLAAKSLLPWLA
>Mature_297_residues
MEQLRTELSHLLGEKLSRVECVSEQAATALWFLYDAQGNPMPLLARSFTTPGVARQLAWKISTLARNGTVRMPVVYGVMT
HEEHPGPDVLLLERLRGVPVEAPTRTPARWEQLQEQIVEGLLAWHRQDSGGCVGMVDNTQENLWPNWYRQRVEILWSTLN
LYQDTGLTMQDKRLLFRSRECLPELFRDFNDNAVLVHGNFTLRSMLKDPRSDQLLAMVGPGMMLWAPREYELFRLAEGGQ
AEQLLWRYLQQAPVSEAFVWRRWLYLLWDEVDSLVNTGRFDRARFDLAAKSLLPWLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787149, Length=297, Percent_Identity=79.1245791245791, Blast_Score=501, Evalue=1e-143,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34409; Mature: 34409

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLRTELSHLLGEKLSRVECVSEQAATALWFLYDAQGNPMPLLARSFTTPGVARQLAWK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHCCCCCHHHHHHHHH
ISTLARNGTVRMPVVYGVMTHEEHPGPDVLLLERLRGVPVEAPTRTPARWEQLQEQIVEG
HHHHHCCCCEEEHEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
LLAWHRQDSGGCVGMVDNTQENLWPNWYRQRVEILWSTLNLYQDTGLTMQDKRLLFRSRE
HHHHHCCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
CLPELFRDFNDNAVLVHGNFTLRSMLKDPRSDQLLAMVGPGMMLWAPREYELFRLAEGGQ
HHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCCEEEEECCCEEEECCCCCCEEEECCCCC
AEQLLWRYLQQAPVSEAFVWRRWLYLLWDEVDSLVNTGRFDRARFDLAAKSLLPWLA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEQLRTELSHLLGEKLSRVECVSEQAATALWFLYDAQGNPMPLLARSFTTPGVARQLAWK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHCCCCCHHHHHHHHH
ISTLARNGTVRMPVVYGVMTHEEHPGPDVLLLERLRGVPVEAPTRTPARWEQLQEQIVEG
HHHHHCCCCEEEHEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
LLAWHRQDSGGCVGMVDNTQENLWPNWYRQRVEILWSTLNLYQDTGLTMQDKRLLFRSRE
HHHHHCCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
CLPELFRDFNDNAVLVHGNFTLRSMLKDPRSDQLLAMVGPGMMLWAPREYELFRLAEGGQ
HHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCCEEEEECCCEEEECCCCCCEEEECCCCC
AEQLLWRYLQQAPVSEAFVWRRWLYLLWDEVDSLVNTGRFDRARFDLAAKSLLPWLA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]