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The map label for this gene is ycaO [H]

Identifier: 238893962

GI number: 238893962

Start: 1849529

End: 1851322

Strand: Reverse

Name: ycaO [H]

Synonym: KP1_1904

Alternate gene names: 238893962

Gene position: 1851322-1849529 (Counterclockwise)

Preceding gene: 238893976

Following gene: 238893961

Centisome position: 35.27

GC content: 58.31

Gene sequence:

>1794_bases
TTGCGCGCTTTCCGTACGACAAAAGTGATCGCCATGACCCAAACGTTTATTCCCGGCAAAGATGCCGCCCTGGAAGATTC
CATCGCTCGCTTCCAGCAGAAATTGCTCGACCTCGGATTTGATATCGAAGAGGCCTCGTGGCTGAACCCGGTGCCGCACG
TGTGGTCCGTTCACATTCGCGATAAAGCGTGCGCGCTGTGCTTTACCAATGGTAAAGGCGCCACCAAAAAGGCAGCCCTG
GCCTCCGCGCTGGGCGAATATTTCGAACGTCTGTCCACTAACTATTTCTTCGCCGACTTCTGGTTAGGCGACACAATCGC
TAACGGCCCGTTTGTTCACTACCCGAACGAAAAGTGGTTCCCGCTGACTGAGGATGATGAAGTCCCGGAAGGTCTGCTGG
ATGCCCGCCTGCGCGCGTTCTACGATCCTGACGATCAGTTAACGGCCAGTATGCTGGTGGATCTGCAGTCAGGTAACGAT
GAGCGCGGCGTGTGCGGTCTGCCTTTTACCCGCCAGTCCGACGGCGAAACCGTCTATATTCCGATGAATATTGTCGGTAA
CCTGTACGTCTCCAACGGCATGTCCGCCGGTAACACCCGCAACGAAGCGCGGGTACAGGGTCTGTCAGAGGTCTTTGAAC
GTCACATTAAAAACCGCATCATCGCTGAAAGCATCAGCCTGCCGGAGATCCCGGCGGAAGTCATGGCGCGCTATCCGGGC
GTCGTGGAGTCGATCGCCAAACTGGAAGCTGAAGGTTTCCCGATCTTTGCCTATGATGGCTCGCTGGGCGGCAAATATCC
GGTTATCTGCGTCGTGCTGTTTAACCCGGCTAACGGCACCTGCTTCGCCTCCTTCGGCGCCCACCCGGACTTTGGCGTGG
CGCTGGAGCGAACCGTCACCGAACTGCTGCAGGGCCGCAGCCTGAAAGACCTCGACGTCTTCACGCCGCCAACCTTCGAT
GACGAAGAGGTCGCCGAGCACGCGAACCTCGAAACCCACTTTATCGACTCCAGCGGCCTGATCTCCTGGGATATGTTCAA
GCAGGACGCCGACTATCCATTCGTTGACTGGAGCTTCTCTGGTACTACCGAAGAAGAGTTCGCCACCCTGATGGCCATCT
TCAAGGCCGAAGATAAAGAAGTGTACATCGCCGACTACGAGCACCTGGGCGTTTACGCCTGCCGTATCATCGTCCCGGGG
ATGTCGGACATATACCCGGCGGAAGACCTGTGGCTGGCGAACAACAGCATGGGCGCTCATCTGCGGGACACCATTCTGTC
CCTGCCGGGCAGCGAGTGGGATAAAGAAGATTACCTGGCGCTGATCGAGCAGATGGACGATGAAGGTCTGGATGATTTCA
CCCGCGTTCGCGAACTGCTGGGGCTCGCCACCGGAAAAGACAACGGCTGGTATACCCTGCGCGTCGGCGAGCTGAAAGCG
ATGCTGGCCCTGGCCGGCGGCGATCTGGAACAGGCGCTGATCTGGACCGAGTGGACCATGGAATTTAATGCTTCGGTCTT
CAGCGCGGAGCGCGCGAACTACTATCGCTGTCTGCAAACCCTGCTGCTGCTGAGCCAGGAAGAAGAGCGTCAGCCGCTGC
AGTACCTGAACGCCTTCATCCGTATGTACGGCGCCGACGCGGTCGAAGCCGCCAGCGCGGCGCTGAGCGGGGAAGCGCCG
TTCTATGGTCTCCAGGCGGTCGATAGCGATCTGCAGGCCTTCCCGGCCCATCAGTCGCTGCTGAAAGCCTATGAAAAACT
GCAGCGGGCGAAAGCGGCGTTTTGGGCAAAATAA

Upstream 100 bases:

>100_bases
CCAGTCAAAGGCTTTCATTTTCCATCTCCCTGTGTATTAAAGATGCCTCTAAGCATAGCCAGATGATGGAGATAGCACCT
GTCAGATAAAAGCCGTATCA

Downstream 100 bases:

>100_bases
GCCCAGCTTGCGCCATCGTTAATGCTTACAACGGAGCCCTCAGCGGCTCCGTTATTTAACCCTGAGAAAGCGCCTCCTAT
AATTTGTAGGTGTAAAGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 597; Mature: 597

Protein sequence:

>597_residues
MRAFRTTKVIAMTQTFIPGKDAALEDSIARFQQKLLDLGFDIEEASWLNPVPHVWSVHIRDKACALCFTNGKGATKKAAL
ASALGEYFERLSTNYFFADFWLGDTIANGPFVHYPNEKWFPLTEDDEVPEGLLDARLRAFYDPDDQLTASMLVDLQSGND
ERGVCGLPFTRQSDGETVYIPMNIVGNLYVSNGMSAGNTRNEARVQGLSEVFERHIKNRIIAESISLPEIPAEVMARYPG
VVESIAKLEAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDLDVFTPPTFD
DEEVAEHANLETHFIDSSGLISWDMFKQDADYPFVDWSFSGTTEEEFATLMAIFKAEDKEVYIADYEHLGVYACRIIVPG
MSDIYPAEDLWLANNSMGAHLRDTILSLPGSEWDKEDYLALIEQMDDEGLDDFTRVRELLGLATGKDNGWYTLRVGELKA
MLALAGGDLEQALIWTEWTMEFNASVFSAERANYYRCLQTLLLLSQEEERQPLQYLNAFIRMYGADAVEAASAALSGEAP
FYGLQAVDSDLQAFPAHQSLLKAYEKLQRAKAAFWAK

Sequences:

>Translated_597_residues
MRAFRTTKVIAMTQTFIPGKDAALEDSIARFQQKLLDLGFDIEEASWLNPVPHVWSVHIRDKACALCFTNGKGATKKAAL
ASALGEYFERLSTNYFFADFWLGDTIANGPFVHYPNEKWFPLTEDDEVPEGLLDARLRAFYDPDDQLTASMLVDLQSGND
ERGVCGLPFTRQSDGETVYIPMNIVGNLYVSNGMSAGNTRNEARVQGLSEVFERHIKNRIIAESISLPEIPAEVMARYPG
VVESIAKLEAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDLDVFTPPTFD
DEEVAEHANLETHFIDSSGLISWDMFKQDADYPFVDWSFSGTTEEEFATLMAIFKAEDKEVYIADYEHLGVYACRIIVPG
MSDIYPAEDLWLANNSMGAHLRDTILSLPGSEWDKEDYLALIEQMDDEGLDDFTRVRELLGLATGKDNGWYTLRVGELKA
MLALAGGDLEQALIWTEWTMEFNASVFSAERANYYRCLQTLLLLSQEEERQPLQYLNAFIRMYGADAVEAASAALSGEAP
FYGLQAVDSDLQAFPAHQSLLKAYEKLQRAKAAFWAK
>Mature_597_residues
MRAFRTTKVIAMTQTFIPGKDAALEDSIARFQQKLLDLGFDIEEASWLNPVPHVWSVHIRDKACALCFTNGKGATKKAAL
ASALGEYFERLSTNYFFADFWLGDTIANGPFVHYPNEKWFPLTEDDEVPEGLLDARLRAFYDPDDQLTASMLVDLQSGND
ERGVCGLPFTRQSDGETVYIPMNIVGNLYVSNGMSAGNTRNEARVQGLSEVFERHIKNRIIAESISLPEIPAEVMARYPG
VVESIAKLEAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDLDVFTPPTFD
DEEVAEHANLETHFIDSSGLISWDMFKQDADYPFVDWSFSGTTEEEFATLMAIFKAEDKEVYIADYEHLGVYACRIIVPG
MSDIYPAEDLWLANNSMGAHLRDTILSLPGSEWDKEDYLALIEQMDDEGLDDFTRVRELLGLATGKDNGWYTLRVGELKA
MLALAGGDLEQALIWTEWTMEFNASVFSAERANYYRCLQTLLLLSQEEERQPLQYLNAFIRMYGADAVEAASAALSGEAP
FYGLQAVDSDLQAFPAHQSLLKAYEKLQRAKAAFWAK

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=586, Percent_Identity=90.7849829351536, Blast_Score=1104, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 66629; Mature: 66629

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAFRTTKVIAMTQTFIPGKDAALEDSIARFQQKLLDLGFDIEEASWLNPVPHVWSVHIR
CCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
DKACALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGDTIANGPFVHYPNEKWF
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEECCCCCCC
PLTEDDEVPEGLLDARLRAFYDPDDQLTASMLVDLQSGNDERGVCGLPFTRQSDGETVYI
CCCCCCCCCHHHHHHHHHHHCCCCHHHEEHHEEEECCCCCCCCEECCCCCCCCCCCEEEE
PMNIVGNLYVSNGMSAGNTRNEARVQGLSEVFERHIKNRIIAESISLPEIPAEVMARYPG
EHHEECEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCH
VVESIAKLEAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVT
HHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHH
ELLQGRSLKDLDVFTPPTFDDEEVAEHANLETHFIDSSGLISWDMFKQDADYPFVDWSFS
HHHCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCEEHHHHHCCCCCCEEEEECC
GTTEEEFATLMAIFKAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGAH
CCCHHHHHHHHHHHHCCCCEEEEEECHHCCEEEEEEEECCCCCCCCCCCEEEECCCCCCH
LRDTILSLPGSEWDKEDYLALIEQMDDEGLDDFTRVRELLGLATGKDNGWYTLRVGELKA
HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHH
MLALAGGDLEQALIWTEWTMEFNASVFSAERANYYRCLQTLLLLSQEEERQPLQYLNAFI
HHHHCCCCHHHEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHH
RMYGADAVEAASAALSGEAPFYGLQAVDSDLQAFPAHQSLLKAYEKLQRAKAAFWAK
HHHCCCHHHHHHHHCCCCCCCCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRAFRTTKVIAMTQTFIPGKDAALEDSIARFQQKLLDLGFDIEEASWLNPVPHVWSVHIR
CCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
DKACALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGDTIANGPFVHYPNEKWF
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEECCCCCCC
PLTEDDEVPEGLLDARLRAFYDPDDQLTASMLVDLQSGNDERGVCGLPFTRQSDGETVYI
CCCCCCCCCHHHHHHHHHHHCCCCHHHEEHHEEEECCCCCCCCEECCCCCCCCCCCEEEE
PMNIVGNLYVSNGMSAGNTRNEARVQGLSEVFERHIKNRIIAESISLPEIPAEVMARYPG
EHHEECEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCH
VVESIAKLEAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVT
HHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHH
ELLQGRSLKDLDVFTPPTFDDEEVAEHANLETHFIDSSGLISWDMFKQDADYPFVDWSFS
HHHCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCEEHHHHHCCCCCCEEEEECC
GTTEEEFATLMAIFKAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGAH
CCCHHHHHHHHHHHHCCCCEEEEEECHHCCEEEEEEEECCCCCCCCCCCEEEECCCCCCH
LRDTILSLPGSEWDKEDYLALIEQMDDEGLDDFTRVRELLGLATGKDNGWYTLRVGELKA
HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHH
MLALAGGDLEQALIWTEWTMEFNASVFSAERANYYRCLQTLLLLSQEEERQPLQYLNAFI
HHHHCCCCHHHEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHH
RMYGADAVEAASAALSGEAPFYGLQAVDSDLQAFPAHQSLLKAYEKLQRAKAAFWAK
HHHCCCHHHHHHHHCCCCCCCCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]