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The map label for this gene is ybjE [H]

Identifier: 238893936

GI number: 238893936

Start: 1814187

End: 1815086

Strand: Reverse

Name: ybjE [H]

Synonym: KP1_1874

Alternate gene names: 238893936

Gene position: 1815086-1814187 (Counterclockwise)

Preceding gene: 238893937

Following gene: 238893935

Centisome position: 34.58

GC content: 53.89

Gene sequence:

>900_bases
ATGTTTTCGGGACTCTTTATTATTCTGTTGCCGCTGGTCGTCGGCTATTTACTGCCTCTTCGTCACTCCTCCGCGCTAAA
GCTGATAAACCGCATGCTCAGCTGGATTGTCTATGTAATCCTTTTTTTTATGGGTATCAGCCTGGCGTTCCTCGACAATC
TGGCCAGCAACCTGCTGGCAATATTGCATTACGCCGCGGTGAGCGTGGTTATCATTTTACTGTGTAATATCGCCGCCCTG
CTGTGGCTGGAAAGTAAAATGCCATGGCGCAGTCAGCATCGTCAGGAGAAATTACCCTCGCGCCTGGCCATGGCCCTGGA
ATCGCTGCAGCTGTGCGGTGTGGTCGTGCTCGGTTTTCTGCTCGGTCTGACCAGACTGCCTTTTTTACAGCACGCGACAG
AAGCCAGCGAATATACGTTGATTTTTCTCCTGTTCCTCGTTGGTATCCAATTACGCAATAATGGAATGAGTCTGCGACAA
ATAGTCCTTAACCGCCGGGGAATGATCGTCGCCGTGGTGGTTACGGCCAGTTCATTACTCGGCGGGATACTTAACGCCTT
TATTCTCGGTCTGCCGTTAAAGACCGGTCTGGCAATGGCCAGCGGTTTCGGCTGGTATTCGCTCTCCGGTATTTTACTCA
CCGAATCCTTTGGCCCGGTCATCGGTAGCGCGGCGTTCTTTAACGATCTCTGTCGCGAGCTGCTGGCCATCATGTTAATT
CCAGGCCTTATTCGCCGCAGCCGCTCCACGGCGCTGGGGCTGTGCGGCGCCACCTCGATGGACTTCACCTTACCGGTACT
GCAGCGTTCCGGCGGCGTCGAAATCGTCCCTGCCGCCATCGTGCACGGTTTTCTGCTTAGTTTGCTGGTCCCGATCCTGA
TCGCCTTTTTTACCGCCTGA

Upstream 100 bases:

>100_bases
GGGTCTCCGGGCTTTTTCTTTCTGGCGACAGCTTTACTCGGCCCGGTGATTTGGGTAGTGTCATGGGCGCTATTCTCATC
ATGCAAGGGCTGCATCGTTC

Downstream 100 bases:

>100_bases
GCACCCGTTGGCGGCAGCCCTCCTGCCGCCAAATTTGCGCTAAATCAATCTCCCTTTAAGTTGTCTTAGAAATACCTTTT
CACCCGTTGCCGCGCGGCAT

Product: putative surface protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MFSGLFIILLPLVVGYLLPLRHSSALKLINRMLSWIVYVILFFMGISLAFLDNLASNLLAILHYAAVSVVIILLCNIAAL
LWLESKMPWRSQHRQEKLPSRLAMALESLQLCGVVVLGFLLGLTRLPFLQHATEASEYTLIFLLFLVGIQLRNNGMSLRQ
IVLNRRGMIVAVVVTASSLLGGILNAFILGLPLKTGLAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLCRELLAIMLI
PGLIRRSRSTALGLCGATSMDFTLPVLQRSGGVEIVPAAIVHGFLLSLLVPILIAFFTA

Sequences:

>Translated_299_residues
MFSGLFIILLPLVVGYLLPLRHSSALKLINRMLSWIVYVILFFMGISLAFLDNLASNLLAILHYAAVSVVIILLCNIAAL
LWLESKMPWRSQHRQEKLPSRLAMALESLQLCGVVVLGFLLGLTRLPFLQHATEASEYTLIFLLFLVGIQLRNNGMSLRQ
IVLNRRGMIVAVVVTASSLLGGILNAFILGLPLKTGLAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLCRELLAIMLI
PGLIRRSRSTALGLCGATSMDFTLPVLQRSGGVEIVPAAIVHGFLLSLLVPILIAFFTA
>Mature_299_residues
MFSGLFIILLPLVVGYLLPLRHSSALKLINRMLSWIVYVILFFMGISLAFLDNLASNLLAILHYAAVSVVIILLCNIAAL
LWLESKMPWRSQHRQEKLPSRLAMALESLQLCGVVVLGFLLGLTRLPFLQHATEASEYTLIFLLFLVGIQLRNNGMSLRQ
IVLNRRGMIVAVVVTASSLLGGILNAFILGLPLKTGLAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLCRELLAIMLI
PGLIRRSRSTALGLCGATSMDFTLPVLQRSGGVEIVPAAIVHGFLLSLLVPILIAFFTA

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1452 [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=299, Percent_Identity=82.943143812709, Blast_Score=495, Evalue=1e-141,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 32522; Mature: 32522

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSGLFIILLPLVVGYLLPLRHSSALKLINRMLSWIVYVILFFMGISLAFLDNLASNLLA
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILHYAAVSVVIILLCNIAALLWLESKMPWRSQHRQEKLPSRLAMALESLQLCGVVVLGFL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLTRLPFLQHATEASEYTLIFLLFLVGIQLRNNGMSLRQIVLNRRGMIVAVVVTASSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEHHHHHHHHHH
GGILNAFILGLPLKTGLAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLCRELLAIMLI
HHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHH
PGLIRRSRSTALGLCGATSMDFTLPVLQRSGGVEIVPAAIVHGFLLSLLVPILIAFFTA
HHHHHHCCCHHHHHCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFSGLFIILLPLVVGYLLPLRHSSALKLINRMLSWIVYVILFFMGISLAFLDNLASNLLA
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILHYAAVSVVIILLCNIAALLWLESKMPWRSQHRQEKLPSRLAMALESLQLCGVVVLGFL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLTRLPFLQHATEASEYTLIFLLFLVGIQLRNNGMSLRQIVLNRRGMIVAVVVTASSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEHHHHHHHHHH
GGILNAFILGLPLKTGLAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLCRELLAIMLI
HHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHH
PGLIRRSRSTALGLCGATSMDFTLPVLQRSGGVEIVPAAIVHGFLLSLLVPILIAFFTA
HHHHHHCCCHHHHHCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]