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The map label for this gene is bssR [H]

Identifier: 238893894

GI number: 238893894

Start: 1772200

End: 1772583

Strand: Direct

Name: bssR [H]

Synonym: KP1_1827

Alternate gene names: 238893894

Gene position: 1772200-1772583 (Clockwise)

Preceding gene: 238893891

Following gene: 238893895

Centisome position: 33.77

GC content: 50.78

Gene sequence:

>384_bases
ATGACCGTTGACAGACTATACCGCCACCTTCTGCAGAAGCTTATTAACGCCAATATCGATATTGACGCCTATCTGCAACT
GCGAAAGGCCAAAGGCTACATGTCAGTCAGCGAAAATGACCATCTGCGTGATAACTTGTTTGAGCTTTGCCGTGAAATGC
GTGCGCAGGCGCCGCGCCTGCAGAATGCCATTTCACCGGAGGAGAGGGATGTCCTTCGCCTGGCCGGCGAATCGGTCGCC
GCCGCTGCACTATGCCTGATGAGCGGGCATCATGATTGTCCGCTATACATCGCTGTTAACGTAGAGAAGCTAGAACGCTG
TCTGACAGGATTGACCTCAAATATTCATAAATTGAATAAATTGGCGCCAATCACTCATGCCTGA

Upstream 100 bases:

>100_bases
ATGATGTTAAAGAACTGGGGATTATTGACTTGGCGCATCATTTTGCACAAAAAATAACCGTATTATGGAAAGGGTAAAGG
ACGACAGAGGAGGAACCGTG

Downstream 100 bases:

>100_bases
TCGGCTGAAACCCAGGGGAAGTGAATGCTTCCCCTGTTAAAGGTTATGTAAAAATCCCCGCGCAAATTTCCCCGCTGGCT
ACCCTTTAGCCCAGAGCTGA

Product: biofilm formation regulatory protein BssR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTVDRLYRHLLQKLINANIDIDAYLQLRKAKGYMSVSENDHLRDNLFELCREMRAQAPRLQNAISPEERDVLRLAGESVA
AAALCLMSGHHDCPLYIAVNVEKLERCLTGLTSNIHKLNKLAPITHA

Sequences:

>Translated_127_residues
MTVDRLYRHLLQKLINANIDIDAYLQLRKAKGYMSVSENDHLRDNLFELCREMRAQAPRLQNAISPEERDVLRLAGESVA
AAALCLMSGHHDCPLYIAVNVEKLERCLTGLTSNIHKLNKLAPITHA
>Mature_126_residues
TVDRLYRHLLQKLINANIDIDAYLQLRKAKGYMSVSENDHLRDNLFELCREMRAQAPRLQNAISPEERDVLRLAGESVAA
AALCLMSGHHDCPLYIAVNVEKLERCLTGLTSNIHKLNKLAPITHA

Specific function: Represses biofilm formation in M9C glu and LB glu media but not in M9C and LB media. Seems to act as a global regulator of several genes involved in catabolite repression and stress response and regulation of the uptake and export of signaling pathways. C

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787059, Length=127, Percent_Identity=54.3307086614173, Blast_Score=132, Evalue=9e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020359
- ProDom:   PD079626 [H]

Pfam domain/function: PF10799 YliH [H]

EC number: NA

Molecular weight: Translated: 14362; Mature: 14231

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVDRLYRHLLQKLINANIDIDAYLQLRKAKGYMSVSENDHLRDNLFELCREMRAQAPRL
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHH
QNAISPEERDVLRLAGESVAAAALCLMSGHHDCPLYIAVNVEKLERCLTGLTSNIHKLNK
HHCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
LAPITHA
HCCCCCC
>Mature Secondary Structure 
TVDRLYRHLLQKLINANIDIDAYLQLRKAKGYMSVSENDHLRDNLFELCREMRAQAPRL
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHH
QNAISPEERDVLRLAGESVAAAALCLMSGHHDCPLYIAVNVEKLERCLTGLTSNIHKLNK
HHCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
LAPITHA
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]