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The map label for this gene is ybiT [H]

Identifier: 238893877

GI number: 238893877

Start: 1747456

End: 1749048

Strand: Direct

Name: ybiT [H]

Synonym: KP1_1810

Alternate gene names: 238893877

Gene position: 1747456-1749048 (Clockwise)

Preceding gene: 238893874

Following gene: 238893880

Centisome position: 33.29

GC content: 57.06

Gene sequence:

>1593_bases
GTGCTAGTATCCAGCAACGTTACCATGCAGTTTGGCAGCAAGCCGCTGTTCGAAAATATCTCCGTTAAATTTGGCGGCGG
CAACCGTTATGGTCTGATCGGCGCCAACGGCAGCGGTAAATCGACCTTTATGAAGATCCTCGGCGGCGATCTCGAACCGA
CGCTGGGCAACGTTTCACTCGACCCGAACGAGCGCATCGGTAAGCTGCGTCAGGATCAGTTCGCCTTTGAAGCGTTCACC
GTGCTGGATACGGTCATCATGGGCCACGGCGAGCTGTGGGAAGTGAAGCAGGAGCGCGATCGCATCTACGCCCTCGCTGA
GATGAGCGAAGAAGATGGCTACAAAGTGGCCGACCTGGAAGTCAAATATGGCGAAATGGACGGCTACTCGGCGGAAGCGC
GCGCCGGCGAACTGCTGCTCGGCGTCGGCATTCCGGTTGAACAGCATTATGGCCCGATGAGCGAAGTCGCGCCGGGCTGG
AAGCTGCGCGTCCTGCTGGCGCAGGCGCTGTTTTCCAATCCGGATATCCTGCTGCTCGATGAACCGACCAACAACCTGGA
CATCGACACCATTCGCTGGCTGGAGCAGACGCTGAACGATCGCGACAGCACCATGATTATCATTTCGCACGACCGTCACT
TCCTGAACATGGTCTGCACCCACATGGCGGATCTCGACTACGGCGAGCTGCGCGTGTATCCGGGCAACTACGACGAATAC
ATGACCGCGGCTACCCAGGCGCGTGAGCGTCTGCTGGCGGACAACGCCAAGAAAAAAGCGCAGATTGCGGACCTGCAGTC
GTTCGTTAGCCGCTTCAGCGCCAACGCCTCTAAATCGCGTCAGGCCACCTCGCGCGCGCGCCAGATTGACAAAATCAAGC
TGGAAGAGGTTAAAGCCTCCAGCCGTCAGAACCCATTTATCCGCTTCGAGCAGGATAAGAAACTGTTCCGTAACGCGCTG
GAAGTGGAAGCCCTTACCAAAGGCTTTGATGAAGGTCCGCTGTTCAAAAACGTCAACCTGCTGCTGGAAGTGGGCGAAAA
GATCGCCATTCTGGGCGCCAACGGCGTGGGTAAATCCACCATGCTGAAAACCCTGGTAGGCGAACTGCAGCCGGACAACG
GCAGCGTGAAATGGTCTGAAAACGCGCAAATCGGCTACTACGCGCAGGACCATGAGTACGAGTTCGAAAACGACCTGACG
GTCTTCGAATGGATGAGCCAGTGGAAGCAGGAAGGCGACGACGAGCAGGCAGTACGCAGCATCCTCGGCCGTCTGCTGTT
TAGCCAGGACGATATCAAAAAGCCGGCGAAGGTGCTTTCCGGTGGCGAGAAAGGGCGCATGCTGTTCGGTAAGCTGATGA
TGCAGAAGCCAAACATCCTGGTGATGGACGAACCGACCAACCACCTGGATATGGAGTCGATTGAATCGCTGAACATGGCT
CTGGAGATGTATCAGGGCACCCTGATCTTTGTCTCCCACGACCGTGAGTTTGTCAGCTCGCTGGCGACCCGCGTCCTGGA
GATCACTCCGGACCGCGTGATCGACTTCAGCGGCAACTACGAAGACTACCTGCGCAGCAAAGGTATCGAGTAA

Upstream 100 bases:

>100_bases
CGCCGCGGTGGAATTTACCGCAGGCCGTGAAAAGTGTGTCATTTGCTGGCATAATGTCTGCTGTATCACACCCCTCATAC
TCTTTTTTCAGGATATCCCC

Downstream 100 bases:

>100_bases
TCCCTGTCCGTTACCCGGGTAGCGGCTACGCCTTACCCGGGCTACCAAACCGCATAGTGCTGTAGCCCCGGTAAGCGATA
GCGCCACCGGGGATTTCTAG

Product: putative transport system ATP-binding component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEAFT
VLDTVIMGHGELWEVKQERDRIYALAEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGW
KLRVLLAQALFSNPDILLLDEPTNNLDIDTIRWLEQTLNDRDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEY
MTAATQARERLLADNAKKKAQIADLQSFVSRFSANASKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNAL
EVEALTKGFDEGPLFKNVNLLLEVGEKIAILGANGVGKSTMLKTLVGELQPDNGSVKWSENAQIGYYAQDHEYEFENDLT
VFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILVMDEPTNHLDMESIESLNMA
LEMYQGTLIFVSHDREFVSSLATRVLEITPDRVIDFSGNYEDYLRSKGIE

Sequences:

>Translated_530_residues
MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEAFT
VLDTVIMGHGELWEVKQERDRIYALAEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGW
KLRVLLAQALFSNPDILLLDEPTNNLDIDTIRWLEQTLNDRDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEY
MTAATQARERLLADNAKKKAQIADLQSFVSRFSANASKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNAL
EVEALTKGFDEGPLFKNVNLLLEVGEKIAILGANGVGKSTMLKTLVGELQPDNGSVKWSENAQIGYYAQDHEYEFENDLT
VFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILVMDEPTNHLDMESIESLNMA
LEMYQGTLIFVSHDREFVSSLATRVLEITPDRVIDFSGNYEDYLRSKGIE
>Mature_530_residues
MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEAFT
VLDTVIMGHGELWEVKQERDRIYALAEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGW
KLRVLLAQALFSNPDILLLDEPTNNLDIDTIRWLEQTLNDRDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEY
MTAATQARERLLADNAKKKAQIADLQSFVSRFSANASKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNAL
EVEALTKGFDEGPLFKNVNLLLEVGEKIAILGANGVGKSTMLKTLVGELQPDNGSVKWSENAQIGYYAQDHEYEFENDLT
VFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILVMDEPTNHLDMESIESLNMA
LEMYQGTLIFVSHDREFVSSLATRVLEITPDRVIDFSGNYEDYLRSKGIE

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=527, Percent_Identity=32.0683111954459, Blast_Score=266, Evalue=3e-71,
Organism=Homo sapiens, GI10947137, Length=537, Percent_Identity=30.7262569832402, Blast_Score=251, Evalue=2e-66,
Organism=Homo sapiens, GI27881506, Length=537, Percent_Identity=30.7262569832402, Blast_Score=251, Evalue=2e-66,
Organism=Homo sapiens, GI10947135, Length=529, Percent_Identity=30.4347826086957, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI69354671, Length=529, Percent_Identity=30.4347826086957, Blast_Score=216, Evalue=5e-56,
Organism=Homo sapiens, GI27477115, Length=148, Percent_Identity=31.7567567567568, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI1787041, Length=530, Percent_Identity=95.6603773584906, Blast_Score=1055, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=529, Percent_Identity=33.0812854442344, Blast_Score=296, Evalue=2e-81,
Organism=Escherichia coli, GI1787182, Length=503, Percent_Identity=32.8031809145129, Blast_Score=244, Evalue=8e-66,
Organism=Escherichia coli, GI2367384, Length=518, Percent_Identity=29.7297297297297, Blast_Score=228, Evalue=7e-61,
Organism=Escherichia coli, GI1786975, Length=520, Percent_Identity=22.5, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1788165, Length=207, Percent_Identity=29.4685990338164, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87081791, Length=212, Percent_Identity=28.3018867924528, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1787029, Length=246, Percent_Identity=26.8292682926829, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1788225, Length=227, Percent_Identity=24.6696035242291, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1788761, Length=213, Percent_Identity=24.8826291079812, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1789891, Length=206, Percent_Identity=24.2718446601942, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87081709, Length=307, Percent_Identity=23.1270358306189, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI87082064, Length=205, Percent_Identity=26.3414634146341, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1787758, Length=182, Percent_Identity=26.3736263736264, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1789672, Length=210, Percent_Identity=26.1904761904762, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1790467, Length=223, Percent_Identity=26.457399103139, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786345, Length=252, Percent_Identity=26.1904761904762, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1788897, Length=196, Percent_Identity=27.5510204081633, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1787164, Length=216, Percent_Identity=25, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI48994943, Length=226, Percent_Identity=28.7610619469027, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87081834, Length=226, Percent_Identity=28.3185840707965, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1786703, Length=208, Percent_Identity=28.8461538461538, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1786698, Length=198, Percent_Identity=26.2626262626263, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI87082267, Length=208, Percent_Identity=26.9230769230769, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI1787370, Length=211, Percent_Identity=24.1706161137441, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=540, Percent_Identity=30.5555555555556, Blast_Score=259, Evalue=2e-69,
Organism=Caenorhabditis elegans, GI17553372, Length=528, Percent_Identity=31.25, Blast_Score=244, Evalue=7e-65,
Organism=Caenorhabditis elegans, GI17559834, Length=539, Percent_Identity=27.6437847866419, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI193202349, Length=220, Percent_Identity=26.3636363636364, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=529, Percent_Identity=30.812854442344, Blast_Score=256, Evalue=7e-69,
Organism=Saccharomyces cerevisiae, GI6321121, Length=533, Percent_Identity=31.7073170731707, Blast_Score=248, Evalue=2e-66,
Organism=Saccharomyces cerevisiae, GI6325030, Length=424, Percent_Identity=27.3584905660377, Blast_Score=133, Evalue=8e-32,
Organism=Saccharomyces cerevisiae, GI6323278, Length=421, Percent_Identity=25.6532066508314, Blast_Score=131, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6324314, Length=420, Percent_Identity=26.6666666666667, Blast_Score=128, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24666836, Length=529, Percent_Identity=32.3251417769376, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24642252, Length=536, Percent_Identity=30.5970149253731, Blast_Score=262, Evalue=4e-70,
Organism=Drosophila melanogaster, GI18859989, Length=536, Percent_Identity=30.5970149253731, Blast_Score=262, Evalue=4e-70,
Organism=Drosophila melanogaster, GI24641342, Length=537, Percent_Identity=29.9813780260708, Blast_Score=241, Evalue=1e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59684; Mature: 59684

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSL
CEECCCCEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCC
DPNERIGKLRQDQFAFEAFTVLDTVIMGHGELWEVKQERDRIYALAEMSEEDGYKVADLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCCCCCEEEEEE
VKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFSNPDILLLD
EEECCCCCCCCCCCCCCEEEECCCCHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIDTIRWLEQTLNDRDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEY
CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCHHHH
MTAATQARERLLADNAKKKAQIADLQSFVSRFSANASKSRQATSRARQIDKIKLEEVKAS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
SRQNPFIRFEQDKKLFRNALEVEALTKGFDEGPLFKNVNLLLEVGEKIAILGANGVGKST
CCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCHHCHHHHEECCCEEEEEECCCCCHHH
MLKTLVGELQPDNGSVKWSENAQIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRS
HHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH
ILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILVMDEPTNHLDMESIESLNMA
HHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
LEMYQGTLIFVSHDREFVSSLATRVLEITPDRVIDFSGNYEDYLRSKGIE
HHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCC
>Mature Secondary Structure
MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSL
CEECCCCEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCC
DPNERIGKLRQDQFAFEAFTVLDTVIMGHGELWEVKQERDRIYALAEMSEEDGYKVADLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCCCCCEEEEEE
VKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFSNPDILLLD
EEECCCCCCCCCCCCCCEEEECCCCHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIDTIRWLEQTLNDRDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEY
CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCHHHH
MTAATQARERLLADNAKKKAQIADLQSFVSRFSANASKSRQATSRARQIDKIKLEEVKAS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
SRQNPFIRFEQDKKLFRNALEVEALTKGFDEGPLFKNVNLLLEVGEKIAILGANGVGKST
CCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCHHCHHHHEECCCEEEEEECCCCCHHH
MLKTLVGELQPDNGSVKWSENAQIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRS
HHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH
ILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILVMDEPTNHLDMESIESLNMA
HHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
LEMYQGTLIFVSHDREFVSSLATRVLEITPDRVIDFSGNYEDYLRSKGIE
HHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]