| Definition | Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome. |
|---|---|
| Accession | NC_012731 |
| Length | 5,248,520 |
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The map label for this gene is dinG [H]
Identifier: 238893854
GI number: 238893854
Start: 1725485
End: 1727641
Strand: Direct
Name: dinG [H]
Synonym: KP1_1786
Alternate gene names: 238893854
Gene position: 1725485-1727641 (Clockwise)
Preceding gene: 238893853
Following gene: 238893855
Centisome position: 32.88
GC content: 60.04
Gene sequence:
>2157_bases ATGGCTTTGACCGCAGCGCTGAAAGCGCAAATCGCCGCCTGGTATAAGGCGCTTCAGGAACAGATCCCGGACTTTATTCC GCGTCCCCCGCAGCGGCAGATGATCGCCGATGTGGCGAAAACCCTTGCCGGGGAAGAGGGCAGGCATCTGGCTATCGAAG CGCCGACCGGTGTCGGCAAAACGCTGTCATATCTGATCCCGGGCATCGCCATCGCCCGCGAGGAACACAAAACGCTGGTG GTCAGCACCGCCAACGTCGCCCTGCAGGATCAAATCTACAGTAAGGACCTGCCGCTGCTGCGTAAAATCATTCCCGACCT GCGCTTCACCGCCGCCTTTGGCCGCGGACGCTACGTCTGTCCGCGCAACCTGACGGCGCTGGCCAGCACCGAGCCGTCGC AGCAGGATCTGCTGGCCTTTCTCGATGACGATCTCACCCCGAATAATCAGGCGGAGCAGAAGCTGTGCGCGACCCTGAAG CAGGATCTCGACAGCTACCGCTGGGACGGCCTGCGCGACCATACCGACAAAGCCATCGACGATGGGCTATGGAGCCGGCT GAGCACCGATAAGGCCAGCTGCCTGAACCGCAACTGCCACTACTATCGCGAGTGCCCGTTCTTTGTGGCGCGGCGGGAAA TTCAGGAGGCGGAAGTGGTGGTGGCCAACCATGCGCTGGTGATGGCGGCGATGGAGAGCGAAGCGGTGCTGCCGGAGCCG AAAAACCTGCTGCTGGTCCTCGATGAAGGCCATCATCTGCCGGACGTCGCCCGCGACGCGCTGGAGATGAGCGCCGAGAT CACCGCCCCCTGGTTTCGCCTGCAGCTGGATCTATTCTGCAAGCTGGTGGCCACCTGCATGGAGCAGTTTCGTCCGAAAA CCACGCCGCCGCTGGCCAATCCGGAGCGGCTCACCGCTCATTGCGAAGAGCTTTTCGAGCTGATTGCCTCGTTGAATAAT ATTCTCAATCTCTATATGCCCGCCGGTCAGGAAGCGGAGCATCGCTTCCCGATGGGCGAACTGCCGCAGGAGGTGATGGA GATCTGCCAGCGGCTGGCGAAGCTCACCGAGTTGCTGCGCGGCCTGGCGGAGCTGTTCCTGAACGATCTCAGCGAAAAGA CCGGCAGCCATGACGTGGTGCGCCTGCATCGGGTGCTGCTGCAGATGAACCGCGCCCTTGGCATGTTTGAAAGCCAAAGC AAGCTGTGGCGCCTGGCGTCGCTGGCGCAGTCCTCAGGCGCGCCGGTAACCAAATGGGCGACGCGGGTGGTGCGCGATGG CCAGATCCACGTCTGGTTCCACTGCGTCGGGATCCGCGTCAGCGATCAGCTTGAACGGCTGCTGTGGCGCAGCGTGCCGC ATATCGTGGTGACGTCAGCGACGCTGCGCTCGCTAAACAGCTTCTCGCGCCTGCAGGAGATGAGCGGTCTGAAGGAGAAA GCGGGGGACCGCTTCGTGGCGCTGGATTCGCCGTTCAACCACGTGGAGCAGGGGAAAATTATTATTCCTCAAATGCGTTA TGAACCGCTGATGGATAACGAAGAGCAGCACATTGCCGAGATGGCGGCCTATTTTCGCCAGCAGGTGGAGAGCAAAAAAC ATCTCGGGATGCTGGTGCTGTTTGCCAGCGGGCGGGCGATGAACCGCTTCCTCGAGCATGTGACCGATCTGCGCCTGATG CTGTTGGTGCAGGGCGACCAGCCGCGCTACCGGCTGGTGGAGCTGCATCGCAAACGGGTGGAAAGCGGCGAGCGCAGCGT GCTGGTGGGTCTGCAGTCCTTTGCCGAAGGTCTCGATTTAAAAGGCGATCTGCTAAGCCAGGTGCATATCCATAAAATCG CTTTTCCGCCCATCGACAGCCCGGTAGTGATCACCGAAGGCGAATGGCTGAAAAGCCTCAATCGTTATCCCTTCGAGGTA CAGAGTTTGCCCAGCGCCTCCTTTAATCTTATTCAGCAGGTGGGGCGTTTGATCCGTAGCCATAACTGCTGGGGAGAGGT GGTGATTTACGATAAGCGTCTGTTGACCAAAAACTACGGCGCGCGTCTACTGGACGCGTTACCTGTTTTTCCCATAGAGC AGCCGGGCGTTCCGGAGGTTATAGTAAAACGGAAAGCAAAACAGACAGCAAAACAGACGGGCCGCAAACGTCGCTGA
Upstream 100 bases:
>100_bases CTATTTGTCGAGCAGGCTTCCTCACTCCGCAGAAAGCAATACCTCCGGGCGGGCAAAAATGGCACAATAGTGGCTGTTTA TACAGTATTCAGGTTTTCTC
Downstream 100 bases:
>100_bases CGCCGGCGCGTGATGCACCAGGGGGAGCCATGGAGTACAGCAAAATTATAAAAGAGGTGGGTCGCGGTAAGAATCATGCC CGCGATCTCGATCAAGAGAC
Product: ATP-dependent DNA helicase DinG
Products: NA
Alternate protein names: DNA-damage-inducible protein G [H]
Number of amino acids: Translated: 718; Mature: 717
Protein sequence:
>718_residues MALTAALKAQIAAWYKALQEQIPDFIPRPPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEHKTLV VSTANVALQDQIYSKDLPLLRKIIPDLRFTAAFGRGRYVCPRNLTALASTEPSQQDLLAFLDDDLTPNNQAEQKLCATLK QDLDSYRWDGLRDHTDKAIDDGLWSRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPEP KNLLLVLDEGHHLPDVARDALEMSAEITAPWFRLQLDLFCKLVATCMEQFRPKTTPPLANPERLTAHCEELFELIASLNN ILNLYMPAGQEAEHRFPMGELPQEVMEICQRLAKLTELLRGLAELFLNDLSEKTGSHDVVRLHRVLLQMNRALGMFESQS KLWRLASLAQSSGAPVTKWATRVVRDGQIHVWFHCVGIRVSDQLERLLWRSVPHIVVTSATLRSLNSFSRLQEMSGLKEK AGDRFVALDSPFNHVEQGKIIIPQMRYEPLMDNEEQHIAEMAAYFRQQVESKKHLGMLVLFASGRAMNRFLEHVTDLRLM LLVQGDQPRYRLVELHRKRVESGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEV QSLPSASFNLIQQVGRLIRSHNCWGEVVIYDKRLLTKNYGARLLDALPVFPIEQPGVPEVIVKRKAKQTAKQTGRKRR
Sequences:
>Translated_718_residues MALTAALKAQIAAWYKALQEQIPDFIPRPPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEHKTLV VSTANVALQDQIYSKDLPLLRKIIPDLRFTAAFGRGRYVCPRNLTALASTEPSQQDLLAFLDDDLTPNNQAEQKLCATLK QDLDSYRWDGLRDHTDKAIDDGLWSRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPEP KNLLLVLDEGHHLPDVARDALEMSAEITAPWFRLQLDLFCKLVATCMEQFRPKTTPPLANPERLTAHCEELFELIASLNN ILNLYMPAGQEAEHRFPMGELPQEVMEICQRLAKLTELLRGLAELFLNDLSEKTGSHDVVRLHRVLLQMNRALGMFESQS KLWRLASLAQSSGAPVTKWATRVVRDGQIHVWFHCVGIRVSDQLERLLWRSVPHIVVTSATLRSLNSFSRLQEMSGLKEK AGDRFVALDSPFNHVEQGKIIIPQMRYEPLMDNEEQHIAEMAAYFRQQVESKKHLGMLVLFASGRAMNRFLEHVTDLRLM LLVQGDQPRYRLVELHRKRVESGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEV QSLPSASFNLIQQVGRLIRSHNCWGEVVIYDKRLLTKNYGARLLDALPVFPIEQPGVPEVIVKRKAKQTAKQTGRKRR >Mature_717_residues ALTAALKAQIAAWYKALQEQIPDFIPRPPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEHKTLVV STANVALQDQIYSKDLPLLRKIIPDLRFTAAFGRGRYVCPRNLTALASTEPSQQDLLAFLDDDLTPNNQAEQKLCATLKQ DLDSYRWDGLRDHTDKAIDDGLWSRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPEPK NLLLVLDEGHHLPDVARDALEMSAEITAPWFRLQLDLFCKLVATCMEQFRPKTTPPLANPERLTAHCEELFELIASLNNI LNLYMPAGQEAEHRFPMGELPQEVMEICQRLAKLTELLRGLAELFLNDLSEKTGSHDVVRLHRVLLQMNRALGMFESQSK LWRLASLAQSSGAPVTKWATRVVRDGQIHVWFHCVGIRVSDQLERLLWRSVPHIVVTSATLRSLNSFSRLQEMSGLKEKA GDRFVALDSPFNHVEQGKIIIPQMRYEPLMDNEEQHIAEMAAYFRQQVESKKHLGMLVLFASGRAMNRFLEHVTDLRLML LVQGDQPRYRLVELHRKRVESGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQ SLPSASFNLIQQVGRLIRSHNCWGEVVIYDKRLLTKNYGARLLDALPVFPIEQPGVPEVIVKRKAKQTAKQTGRKRR
Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787018, Length=718, Percent_Identity=91.0863509749304, Blast_Score=1354, Evalue=0.0, Organism=Escherichia coli, GI1788110, Length=700, Percent_Identity=28.2857142857143, Blast_Score=189, Evalue=6e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR010614 - InterPro: IPR011545 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR001650 [H]
Pfam domain/function: PF00270 DEAD; PF06733 DEAD_2 [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 81362; Mature: 81231
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTAALKAQIAAWYKALQEQIPDFIPRPPQRQMIADVAKTLAGEEGRHLAIEAPTGVGK CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHH TLSYLIPGIAIAREEHKTLVVSTANVALQDQIYSKDLPLLRKIIPDLRFTAAFGRGRYVC HHHHHHCCHHEEECCCCEEEEEECCHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCCEEC PRNLTALASTEPSQQDLLAFLDDDLTPNNQAEQKLCATLKQDLDSYRWDGLRDHTDKAID CCCCEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH DGLWSRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPEP HHHHHHHCCCHHHHHCCCCCHHHCCHHHHHHHHHHHHHEEHCCCCEEEEECCCCCCCCCC KNLLLVLDEGHHLPDVARDALEMSAEITAPWFRLQLDLFCKLVATCMEQFRPKTTPPLAN CCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PERLTAHCEELFELIASLNNILNLYMPAGQEAEHRFPMGELPQEVMEICQRLAKLTELLR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GLAELFLNDLSEKTGSHDVVRLHRVLLQMNRALGMFESQSKLWRLASLAQSSGAPVTKWA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHH TRVVRDGQIHVWFHCVGIRVSDQLERLLWRSVPHIVVTSATLRSLNSFSRLQEMSGLKEK HHHHHCCCEEEEEEEEECCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCHHHH AGDRFVALDSPFNHVEQGKIIIPQMRYEPLMDNEEQHIAEMAAYFRQQVESKKHLGMLVL CCCEEEEECCCCCHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE FASGRAMNRFLEHVTDLRLMLLVQGDQPRYRLVELHRKRVESGERSVLVGLQSFAEGLDL EECCHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC KGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRS CHHHHHHHHHHHEECCCCCCCEEEECCHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHC HNCWGEVVIYDKRLLTKNYGARLLDALPVFPIEQPGVPEVIVKRKAKQTAKQTGRKRR CCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ALTAALKAQIAAWYKALQEQIPDFIPRPPQRQMIADVAKTLAGEEGRHLAIEAPTGVGK CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHH TLSYLIPGIAIAREEHKTLVVSTANVALQDQIYSKDLPLLRKIIPDLRFTAAFGRGRYVC HHHHHHCCHHEEECCCCEEEEEECCHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCCEEC PRNLTALASTEPSQQDLLAFLDDDLTPNNQAEQKLCATLKQDLDSYRWDGLRDHTDKAID CCCCEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH DGLWSRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPEP HHHHHHHCCCHHHHHCCCCCHHHCCHHHHHHHHHHHHHEEHCCCCEEEEECCCCCCCCCC KNLLLVLDEGHHLPDVARDALEMSAEITAPWFRLQLDLFCKLVATCMEQFRPKTTPPLAN CCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PERLTAHCEELFELIASLNNILNLYMPAGQEAEHRFPMGELPQEVMEICQRLAKLTELLR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GLAELFLNDLSEKTGSHDVVRLHRVLLQMNRALGMFESQSKLWRLASLAQSSGAPVTKWA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHH TRVVRDGQIHVWFHCVGIRVSDQLERLLWRSVPHIVVTSATLRSLNSFSRLQEMSGLKEK HHHHHCCCEEEEEEEEECCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCHHHH AGDRFVALDSPFNHVEQGKIIIPQMRYEPLMDNEEQHIAEMAAYFRQQVESKKHLGMLVL CCCEEEEECCCCCHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE FASGRAMNRFLEHVTDLRLMLLVQGDQPRYRLVELHRKRVESGERSVLVGLQSFAEGLDL EECCHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC KGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRS CHHHHHHHHHHHEECCCCCCCEEEECCHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHC HNCWGEVVIYDKRLLTKNYGARLLDALPVFPIEQPGVPEVIVKRKAKQTAKQTGRKRR CCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]