Click here to switch to the map view.

The map label for this gene is ybhN [H]

Identifier: 238893838

GI number: 238893838

Start: 1708992

End: 1709957

Strand: Reverse

Name: ybhN [H]

Synonym: KP1_1770

Alternate gene names: 238893838

Gene position: 1709957-1708992 (Counterclockwise)

Preceding gene: 238893839

Following gene: 238893831

Centisome position: 32.58

GC content: 58.39

Gene sequence:

>966_bases
ATGAGCAAATCACATCCCCGCTGGCGGATGGCGAAAAGAGTGCTGACCGTGCTCTTTTTTATCGCCGTCATCGTCCTGTT
GGTGATCTACGCGCAAAAAGTCGACTGGCAGGACGTGTGGAAGGTGATCCGCGGCTACGATCGGCTGGCCTTGTTTAGCG
CCATTGCGCTGGTTATCGTCAGCTACCTCATTTACGGCTGCTACGATCTGCTCGGTCGGGCCTATTGCGGGCACAAGCTG
GCGAAACGCCAGGTCATGCTGGTGTCGTTTATCTGCTACGCCTTCAACCTGACCCTCAGCACCTGGGTCGGCGGGATCGG
TATGCGCTACCGGCTGTACTCGCGGCTGGGGCTGAACGGCAGCACCATCACCCGTATTTTTTCCTTAAGCATTACCACCA
ACTGGTTGGGCTATATTCTGCTGGGCGGGGTGATATTCACGGCAGATCTGGTGAAGCTGCCGCCGCACTGGTACATCAGC
CAGACCACTCTGCGCATTATCGGCGGGGTGATGCTGATCCTTACGCTTTGCTATCTGTTCGGCTGCGCGTTCGCTAAACG
CCGTCACCTGACGATTAAAGGCCAGCGGCTGGTGCTGCCCTCCTGGCGCTTCGCGCTGCTGCAGATGGGGCTCTCGGCGG
CGAACTGGATGGCGATGGGGGCGATAATCTGGCTGCTGTTGGGCAGCGAGATTAACTATTTTCTGGTATTAGGGGTGCTG
CTGGTGAGCAGTATCGCCGGGGTGATTATCCATATTCCGGCTGGGATCGGCGTACTGGAGGCGGTGTTTATCGCCATGCT
CTCCGGGGAAGATATTTCGAAGGGCGCGATCATTGCCGCCCTGCTCGCCTGGCGCGCGCTCTATTATTTCCTGCCATTGC
TGCTGGCGACGGTGGCCTATCTGCTGCTGGAGAGCCGGGCGAAAAAGCTGCGGCAAAAGAACCAGCGCAAGCTGGCCCGC
GAATGA

Upstream 100 bases:

>100_bases
TACCGGCTCATACCCCGCGGCTGGCCAGAGTCAGCCCGCCGGTCCAGCCGGAAATTGAAACTCAGGACCGCGTCGAGTCT
CCAGCCAGGGATAATCCACT

Downstream 100 bases:

>100_bases
AAGGGCCTGCTCGCGCTGCGCTTGCGCGGGCCTACGGAGTGTGAGCCTGTGAGAGGATCCTGTAGGCCGGGTAAGGCGCA
GCCGCCACCCGGCAGCACCA

Product: putative negative regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MSKSHPRWRMAKRVLTVLFFIAVIVLLVIYAQKVDWQDVWKVIRGYDRLALFSAIALVIVSYLIYGCYDLLGRAYCGHKL
AKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLNGSTITRIFSLSITTNWLGYILLGGVIFTADLVKLPPHWYIS
QTTLRIIGGVMLILTLCYLFGCAFAKRRHLTIKGQRLVLPSWRFALLQMGLSAANWMAMGAIIWLLLGSEINYFLVLGVL
LVSSIAGVIIHIPAGIGVLEAVFIAMLSGEDISKGAIIAALLAWRALYYFLPLLLATVAYLLLESRAKKLRQKNQRKLAR
E

Sequences:

>Translated_321_residues
MSKSHPRWRMAKRVLTVLFFIAVIVLLVIYAQKVDWQDVWKVIRGYDRLALFSAIALVIVSYLIYGCYDLLGRAYCGHKL
AKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLNGSTITRIFSLSITTNWLGYILLGGVIFTADLVKLPPHWYIS
QTTLRIIGGVMLILTLCYLFGCAFAKRRHLTIKGQRLVLPSWRFALLQMGLSAANWMAMGAIIWLLLGSEINYFLVLGVL
LVSSIAGVIIHIPAGIGVLEAVFIAMLSGEDISKGAIIAALLAWRALYYFLPLLLATVAYLLLESRAKKLRQKNQRKLAR
E
>Mature_320_residues
SKSHPRWRMAKRVLTVLFFIAVIVLLVIYAQKVDWQDVWKVIRGYDRLALFSAIALVIVSYLIYGCYDLLGRAYCGHKLA
KRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLNGSTITRIFSLSITTNWLGYILLGGVIFTADLVKLPPHWYISQ
TTLRIIGGVMLILTLCYLFGCAFAKRRHLTIKGQRLVLPSWRFALLQMGLSAANWMAMGAIIWLLLGSEINYFLVLGVLL
VSSIAGVIIHIPAGIGVLEAVFIAMLSGEDISKGAIIAALLAWRALYYFLPLLLATVAYLLLESRAKKLRQKNQRKLARE

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 slr0712 [H]

Homologues:

Organism=Escherichia coli, GI1787006, Length=315, Percent_Identity=79.0476190476191, Blast_Score=494, Evalue=1e-141,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 36128; Mature: 35997

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKSHPRWRMAKRVLTVLFFIAVIVLLVIYAQKVDWQDVWKVIRGYDRLALFSAIALVIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SYLIYGCYDLLGRAYCGHKLAKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
STITRIFSLSITTNWLGYILLGGVIFTADLVKLPPHWYISQTTLRIIGGVMLILTLCYLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GCAFAKRRHLTIKGQRLVLPSWRFALLQMGLSAANWMAMGAIIWLLLGSEINYFLVLGVL
HHHHHHCCCEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LVSSIAGVIIHIPAGIGVLEAVFIAMLSGEDISKGAIIAALLAWRALYYFLPLLLATVAY
HHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLESRAKKLRQKNQRKLARE
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]