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The map label for this gene is ybgK [H]

Identifier: 238893752

GI number: 238893752

Start: 1620200

End: 1621132

Strand: Direct

Name: ybgK [H]

Synonym: KP1_1676

Alternate gene names: 238893752

Gene position: 1620200-1621132 (Clockwise)

Preceding gene: 238893751

Following gene: 238893753

Centisome position: 30.87

GC content: 60.24

Gene sequence:

>933_bases
ATGTTGAAATTTATCCGCGCCGGCATGTATACCTCGGTACAGGATGGCGGCCGGGAAGGCCAGCGCCAGTGGGGGATTAG
CCGCTGCGGCGCGCTGGATAAACCGGCGATGACCATTGCCAATCTGCTGGTGGGCAATGCGCCGGAGGCGGCGGCGCTGG
AAATTACGCTGGGTCAGATCGATGTGCAGTTCACCCACCACTGCTGGTTCGCGTTGACCGGCGCCGCCTGTGAAGCGACG
CTCGACGGCGCGCCGGTCTGGTTGGGCTGGCGAATGGAGGCGAAGGCCGGGCAGCGGCTGGTGCTGAAAAATCCTCAGCA
TGGGATCCGCAGCTATCTGGCGGTCGCGGGCGGTATTGATGTCCCTGAAGTTTTAGGTTCCCGCTCTACCGATCTGAAAG
TCGGTATCGGCGGAATCGAAGGGCGCCGGTTGCAGGATGGCGATCAAGTGAAGATTGGGAAATCGTCCCGCCGCTTTAGC
ACCTCGCGCGGCGTTAAACAGCTGCCGATAGGCAATATTATTCGCGCGCTGCCGGGACCGGAGTATCACGAATTCGACAG
CGTGTCGCAGGAGTCTTTCTGGCGCTCGCCGTGGAAGCTGAGTCCGCAGAGCAACCGTATGGGCTACCGCCTGCAGGGGC
AGCCGCTCAAGCGCACAACCGACCGGGAAATGCTCTCTCATGGCCTGCTGCCCGGCGTGGTACAGGTACCGCATAACGGC
CAGCCGATTGTGTTGATGAACGATGCGCAAACCACCGGCGGCTATCCGCGTATAGCCTGCATTATTGAAGCCGATATGTA
CCAACTGGCGCAAATTCCGCTAGGTCAGCCGATCCATTTCACCCCCTGTTCGCTGGAGGAAGCGCTAAAAGCGCGCGCCG
ACCAGCAGCGCTACCTTGAACAACTGGCCTGGAGATTAAGCGATGAAAATTGA

Upstream 100 bases:

>100_bases
TGGGGCGCACGCCGCTGGCATTATTCGATCCAAAACGTGAAGAGCCGGTGCTGCTGCGTTCCGGCGATCGCGTGCGCTTT
GTGCCGCAGAAGGAGGGGGT

Downstream 100 bases:

>100_bases
TTTAAATGCCGACCTCGGCGAAGGCTGCGCCAGCGATAGCGCGCTGCTGCAGCTGGTCTCTTCCGCCAATATCGCCTGCG
GCTTTCACGCCGGCGATGCG

Product: putative carboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MLKFIRAGMYTSVQDGGREGQRQWGISRCGALDKPAMTIANLLVGNAPEAAALEITLGQIDVQFTHHCWFALTGAACEAT
LDGAPVWLGWRMEAKAGQRLVLKNPQHGIRSYLAVAGGIDVPEVLGSRSTDLKVGIGGIEGRRLQDGDQVKIGKSSRRFS
TSRGVKQLPIGNIIRALPGPEYHEFDSVSQESFWRSPWKLSPQSNRMGYRLQGQPLKRTTDREMLSHGLLPGVVQVPHNG
QPIVLMNDAQTTGGYPRIACIIEADMYQLAQIPLGQPIHFTPCSLEEALKARADQQRYLEQLAWRLSDEN

Sequences:

>Translated_310_residues
MLKFIRAGMYTSVQDGGREGQRQWGISRCGALDKPAMTIANLLVGNAPEAAALEITLGQIDVQFTHHCWFALTGAACEAT
LDGAPVWLGWRMEAKAGQRLVLKNPQHGIRSYLAVAGGIDVPEVLGSRSTDLKVGIGGIEGRRLQDGDQVKIGKSSRRFS
TSRGVKQLPIGNIIRALPGPEYHEFDSVSQESFWRSPWKLSPQSNRMGYRLQGQPLKRTTDREMLSHGLLPGVVQVPHNG
QPIVLMNDAQTTGGYPRIACIIEADMYQLAQIPLGQPIHFTPCSLEEALKARADQQRYLEQLAWRLSDEN
>Mature_310_residues
MLKFIRAGMYTSVQDGGREGQRQWGISRCGALDKPAMTIANLLVGNAPEAAALEITLGQIDVQFTHHCWFALTGAACEAT
LDGAPVWLGWRMEAKAGQRLVLKNPQHGIRSYLAVAGGIDVPEVLGSRSTDLKVGIGGIEGRRLQDGDQVKIGKSSRRFS
TSRGVKQLPIGNIIRALPGPEYHEFDSVSQESFWRSPWKLSPQSNRMGYRLQGQPLKRTTDREMLSHGLLPGVVQVPHNG
QPIVLMNDAQTTGGYPRIACIIEADMYQLAQIPLGQPIHFTPCSLEEALKARADQQRYLEQLAWRLSDEN

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=310, Percent_Identity=78.7096774193548, Blast_Score=493, Evalue=1e-141,
Organism=Saccharomyces cerevisiae, GI6319685, Length=318, Percent_Identity=28.9308176100629, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 34164; Mature: 34164

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKFIRAGMYTSVQDGGREGQRQWGISRCGALDKPAMTIANLLVGNAPEAAALEITLGQI
CCCCHHCCCCCCCCCCCCCHHHHHCHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEE
DVQFTHHCWFALTGAACEATLDGAPVWLGWRMEAKAGQRLVLKNPQHGIRSYLAVAGGID
EEEEEEEEEEEEECCHHEEECCCCCEEEEEEEECCCCCEEEECCCHHHHHHHHHHHCCCC
VPEVLGSRSTDLKVGIGGIEGRRLQDGDQVKIGKSSRRFSTSRGVKQLPIGNIIRALPGP
HHHHHCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCCHHHHHHHCCCC
EYHEFDSVSQESFWRSPWKLSPQSNRMGYRLQGQPLKRTTDREMLSHGLLPGVVQVPHNG
CCHHHCCCCHHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCCCEEECCCCC
QPIVLMNDAQTTGGYPRIACIIEADMYQLAQIPLGQPIHFTPCSLEEALKARADQQRYLE
CCEEEECCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHH
QLAWRLSDEN
HHHHHCCCCC
>Mature Secondary Structure
MLKFIRAGMYTSVQDGGREGQRQWGISRCGALDKPAMTIANLLVGNAPEAAALEITLGQI
CCCCHHCCCCCCCCCCCCCHHHHHCHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEE
DVQFTHHCWFALTGAACEATLDGAPVWLGWRMEAKAGQRLVLKNPQHGIRSYLAVAGGID
EEEEEEEEEEEEECCHHEEECCCCCEEEEEEEECCCCCEEEECCCHHHHHHHHHHHCCCC
VPEVLGSRSTDLKVGIGGIEGRRLQDGDQVKIGKSSRRFSTSRGVKQLPIGNIIRALPGP
HHHHHCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCCHHHHHHHCCCC
EYHEFDSVSQESFWRSPWKLSPQSNRMGYRLQGQPLKRTTDREMLSHGLLPGVVQVPHNG
CCHHHCCCCHHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCCCEEECCCCC
QPIVLMNDAQTTGGYPRIACIIEADMYQLAQIPLGQPIHFTPCSLEEALKARADQQRYLE
CCEEEECCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHH
QLAWRLSDEN
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]